RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CDC42SE1Q9NRR8 79 aa11.55□□□□□ -0.56
HOMER3-204ENST00000539827 LCA10Q71F78 164 aa11.49□□□□□ -0.57
HOMER3-204ENST00000539827 A0A1B0GU69 56 aa11.47□□□□□ -0.57
HOMER3-204ENST00000539827 A8MU10 97 aa11.45□□□□□ -0.58
HOMER3-204ENST00000539827 SEC61BP60468 96 aaKnown RBP11.43□□□□□ -0.58
HOMER3-204ENST00000539827 SPTSSBQ8NFR3 76 aa11.4□□□□□ -0.58
HOMER3-204ENST00000539827 PMAIP1Q13794 54 aa11.36□□□□□ -0.59
HOMER3-204ENST00000539827 HMCN2Q8NDA2 5059 aa11.32□□□□□ -0.6
HOMER3-204ENST00000539827 KRTAP4-1Q9BYQ7 146 aa11.29□□□□□ -0.6
HOMER3-204ENST00000539827 RBM12B-AS1Q9P1G2 102 aa11.29□□□□□ -0.6
HOMER3-204ENST00000539827 MUC17Q685J3 4493 aa11.28□□□□□ -0.6
HOMER3-204ENST00000539827 H1FX-AS1Q4G0G2 97 aa11.26□□□□□ -0.61
HOMER3-204ENST00000539827 UQCR11O14957 56 aa11.25□□□□□ -0.61
HOMER3-204ENST00000539827 S4R3F8 94 aa11.25□□□□□ -0.61
HOMER3-204ENST00000539827 SEC61GP60059 68 aa11.25□□□□□ -0.61
HOMER3-204ENST00000539827 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
HOMER3-204ENST00000539827 SPATA8Q6RVD6 105 aa11.21□□□□□ -0.62
HOMER3-204ENST00000539827 A6NN06 94 aa11.2□□□□□ -0.62
HOMER3-204ENST00000539827 MIR22HGQ0VDD5 57 aa11.17□□□□□ -0.62
HOMER3-204ENST00000539827 KTN1-AS1Q86SY8 53 aa11.12□□□□□ -0.63
HOMER3-204ENST00000539827 UBR4Q5T4S7 5183 aa11.08□□□□□ -0.64
HOMER3-204ENST00000539827 KRTAP19-2Q3LHN2 52 aa10.96□□□□□ -0.65
HOMER3-204ENST00000539827 CSAG1Q6PB30 78 aa10.94□□□□□ -0.66
HOMER3-204ENST00000539827 RNF213Q63HN8 5207 aa10.91□□□□□ -0.66
HOMER3-204ENST00000539827 A0A1B0GU33 70 aa10.9□□□□□ -0.66
HOMER3-204ENST00000539827 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
HOMER3-204ENST00000539827 KRTAP10-6P60371 365 aaPredicted RBP10.88□□□□□ -0.67
HOMER3-204ENST00000539827 H0YAA0 97 aa10.83□□□□□ -0.68
HOMER3-204ENST00000539827 MUC2Q02817 5179 aa10.82□□□□□ -0.68
HOMER3-204ENST00000539827 ADM2Q7Z4H4 148 aa10.81□□□□□ -0.68
HOMER3-204ENST00000539827 P0C880 135 aa10.8□□□□□ -0.68
HOMER3-204ENST00000539827 KRTAP13-4Q3LI77 160 aa10.66□□□□□ -0.7
HOMER3-204ENST00000539827 FLGP20930 4061 aaPredicted RBP10.64□□□□□ -0.71
HOMER3-204ENST00000539827 LCE2CQ5TA81 110 aa10.62□□□□□ -0.71
HOMER3-204ENST00000539827 K7ERS5 55 aa10.6□□□□□ -0.71
HOMER3-204ENST00000539827 PRAC1Q96KF2 57 aa10.54□□□□□ -0.72
HOMER3-204ENST00000539827 A0A0D9SG42 100 aa10.52□□□□□ -0.73
HOMER3-204ENST00000539827 LORP23490 312 aaPredicted RBP10.45□□□□□ -0.74
HOMER3-204ENST00000539827 M0QZ58 72 aa10.43□□□□□ -0.74
HOMER3-204ENST00000539827 MT1HP80294 61 aa10.39□□□□□ -0.75
HOMER3-204ENST00000539827 FAT4Q6V0I7 4981 aa10.39□□□□□ -0.75
HOMER3-204ENST00000539827 R4GN34 69 aa10.37□□□□□ -0.75
HOMER3-204ENST00000539827 M0R2T5 61 aa10.35□□□□□ -0.75
HOMER3-204ENST00000539827 LINC01554Q52M75 96 aa10.28□□□□□ -0.76
HOMER3-204ENST00000539827 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
HOMER3-204ENST00000539827 KRTAP12-1P59990 96 aa10.23□□□□□ -0.77
HOMER3-204ENST00000539827 SPINT4Q6UDR6 99 aa10.23□□□□□ -0.77
HOMER3-204ENST00000539827 ROMO1P60602 79 aa10.23□□□□□ -0.77
HOMER3-204ENST00000539827 KRTAP25-1Q3LHN0 102 aa10.17□□□□□ -0.78
HOMER3-204ENST00000539827 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
HOMER3-204ENST00000539827 CRIPTQ9P021 101 aa10.1□□□□□ -0.79
HOMER3-204ENST00000539827 MT2AP02795 61 aa10.05□□□□□ -0.8
HOMER3-204ENST00000539827 KRTAP9-8Q9BYQ0 159 aa10.04□□□□□ -0.8
HOMER3-204ENST00000539827 MT1FP04733 61 aa10.01□□□□□ -0.81
HOMER3-204ENST00000539827 KRTAP10-10P60014 251 aa9.99□□□□□ -0.81
HOMER3-204ENST00000539827 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
HOMER3-204ENST00000539827 KRTAP19-1Q8IUB9 90 aa9.9□□□□□ -0.83
HOMER3-204ENST00000539827 SPRR2GQ9BYE4 73 aa9.89□□□□□ -0.83
HOMER3-204ENST00000539827 CAMK2N1Q7Z7J9 78 aa9.76□□□□□ -0.85
HOMER3-204ENST00000539827 C10orf95Q9H7T3 257 aa9.7□□□□□ -0.86
HOMER3-204ENST00000539827 PLAC4Q8WY50 150 aa9.66□□□□□ -0.86
HOMER3-204ENST00000539827 KRTAP9-3Q9BYQ3 159 aa9.66□□□□□ -0.86
HOMER3-204ENST00000539827 KRTAP19-8Q3LI54 63 aa9.61□□□□□ -0.87
HOMER3-204ENST00000539827 MT1BP07438 61 aa9.52□□□□□ -0.89
HOMER3-204ENST00000539827 LCE2BO14633 110 aa9.39□□□□□ -0.91
HOMER3-204ENST00000539827 FSIP2Q5CZC0 6907 aa9.34□□□□□ -0.91
HOMER3-204ENST00000539827 TNP1P09430 55 aa9.29□□□□□ -0.92
HOMER3-204ENST00000539827 KRTAP9-2Q9BYQ4 174 aa9.29□□□□□ -0.92
HOMER3-204ENST00000539827 PP632Q6XCG6 107 aa9.27□□□□□ -0.93
HOMER3-204ENST00000539827 MT1XP80297 61 aa9.25□□□□□ -0.93
HOMER3-204ENST00000539827 KRTAP10-5P60370 271 aa9.24□□□□□ -0.93
HOMER3-204ENST00000539827 KRTAP15-1Q3LI76 137 aa9.17□□□□□ -0.94
HOMER3-204ENST00000539827 USH2AO75445 5202 aa9.1□□□□□ -0.95
HOMER3-204ENST00000539827 KRTAP23-1A1A580 65 aa9.07□□□□□ -0.96
HOMER3-204ENST00000539827 PRO2289Q9P1D8 64 aa9.04□□□□□ -0.96
HOMER3-204ENST00000539827 KRTAP10-7P60409 375 aaPredicted RBP8.93□□□□□ -0.98
HOMER3-204ENST00000539827 LCE3AQ5TA76 89 aa8.92□□□□□ -0.98
HOMER3-204ENST00000539827 SSPOA2VEC9 5147 aa8.92□□□□□ -0.98
HOMER3-204ENST00000539827 KRTAP10-12P60413 245 aa8.83□□□□□ -1
HOMER3-204ENST00000539827 CRCT1Q9UGL9 99 aa8.83□□□□□ -1
HOMER3-204ENST00000539827 H3BS24 57 aa8.82□□□□□ -1
HOMER3-204ENST00000539827 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
HOMER3-204ENST00000539827 NDUFAF8A1L188 74 aa8.77□□□□□ -1.01
HOMER3-204ENST00000539827 KRTAP19-6Q3LI70 58 aa8.68□□□□□ -1.02
HOMER3-204ENST00000539827 KRTAP8-1Q8IUC2 63 aa8.67□□□□□ -1.02
HOMER3-204ENST00000539827 FCGBPQ9Y6R7 5405 aaPredicted RBP8.62□□□□□ -1.03
HOMER3-204ENST00000539827 KRTAP4-8A0A0G2JLE6 195 aa8.55□□□□□ -1.04
HOMER3-204ENST00000539827 KRTAP4-8Q9BYQ9 185 aa8.55□□□□□ -1.04
HOMER3-204ENST00000539827 LUZP6Q538Z0 58 aa8.53□□□□□ -1.04
HOMER3-204ENST00000539827 KRTAP12-3P60328 96 aa8.52□□□□□ -1.05
HOMER3-204ENST00000539827 KMT2DO14686 5537 aa8.48□□□□□ -1.05
HOMER3-204ENST00000539827 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
HOMER3-204ENST00000539827 SPRR5A0A1B0GTR4 108 aa8.44□□□□□ -1.06
HOMER3-204ENST00000539827 MACF1Q9UPN3 7388 aaKnown RBP8.32□□□□□ -1.08
HOMER3-204ENST00000539827 SYNE2Q8WXH0 6885 aaKnown RBP8.25□□□□□ -1.09
HOMER3-204ENST00000539827 KRTAP19-7Q3SYF9 63 aa8.24□□□□□ -1.09
HOMER3-204ENST00000539827 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.09
HOMER3-204ENST00000539827 MT1EP04732 61 aa8.08□□□□□ -1.12
HOMER3-204ENST00000539827 LCE3CQ5T5A8 94 aa7.97□□□□□ -1.13
HOMER3-204ENST00000539827 KRTAP9-7A8MTY7 169 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms