RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 LCA10Q71F78 164 aa9.4□□□□□ -0.9
TRPT1-207ENST00000539436 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
TRPT1-207ENST00000539436 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
TRPT1-207ENST00000539436 FAT4Q6V0I7 4981 aa9.28□□□□□ -0.92
TRPT1-207ENST00000539436 MT1HP80294 61 aa9.28□□□□□ -0.92
TRPT1-207ENST00000539436 RPS28P62857 69 aaKnown RBP9.25□□□□□ -0.93
TRPT1-207ENST00000539436 FLGP20930 4061 aaPredicted RBP9.23□□□□□ -0.93
TRPT1-207ENST00000539436 CSAG1Q6PB30 78 aa9.22□□□□□ -0.93
TRPT1-207ENST00000539436 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
TRPT1-207ENST00000539436 M0R2T5 61 aa9.19□□□□□ -0.94
TRPT1-207ENST00000539436 SMIM26A0A096LP01 95 aa9.11□□□□□ -0.95
TRPT1-207ENST00000539436 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
TRPT1-207ENST00000539436 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
TRPT1-207ENST00000539436 ADM2Q7Z4H4 148 aa9□□□□□ -0.97
TRPT1-207ENST00000539436 Q1T7F1 81 aa8.98□□□□□ -0.97
TRPT1-207ENST00000539436 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
TRPT1-207ENST00000539436 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
TRPT1-207ENST00000539436 A0A1B0GU69 56 aa8.96□□□□□ -0.98
TRPT1-207ENST00000539436 H0YAA0 97 aa8.95□□□□□ -0.98
TRPT1-207ENST00000539436 SEC61GP60059 68 aa8.95□□□□□ -0.98
TRPT1-207ENST00000539436 V9GYY9 64 aa8.94□□□□□ -0.98
TRPT1-207ENST00000539436 P0C880 135 aa8.93□□□□□ -0.98
TRPT1-207ENST00000539436 PRR15LQ9BU68 103 aa8.92□□□□□ -0.98
TRPT1-207ENST00000539436 PSPHP1O15172 72 aa8.91□□□□□ -0.98
TRPT1-207ENST00000539436 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
TRPT1-207ENST00000539436 KRTAP9-8Q9BYQ0 159 aa8.91□□□□□ -0.98
TRPT1-207ENST00000539436 MT2AP02795 61 aa8.86□□□□□ -0.99
TRPT1-207ENST00000539436 MT1FP04733 61 aa8.82□□□□□ -1
TRPT1-207ENST00000539436 KRTAP10-10P60014 251 aa8.8□□□□□ -1
TRPT1-207ENST00000539436 Q5VV11 94 aa8.79□□□□□ -1
TRPT1-207ENST00000539436 A0A1B0GU33 70 aa8.76□□□□□ -1.01
TRPT1-207ENST00000539436 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
TRPT1-207ENST00000539436 SPATA8Q6RVD6 105 aa8.67□□□□□ -1.02
TRPT1-207ENST00000539436 R4GN34 69 aa8.67□□□□□ -1.02
TRPT1-207ENST00000539436 M0QZ58 72 aa8.66□□□□□ -1.02
TRPT1-207ENST00000539436 UQCR11O14957 56 aa8.63□□□□□ -1.03
TRPT1-207ENST00000539436 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
TRPT1-207ENST00000539436 A6NED7 52 aa8.6□□□□□ -1.03
TRPT1-207ENST00000539436 KRTAP9-3Q9BYQ3 159 aa8.59□□□□□ -1.03
TRPT1-207ENST00000539436 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
TRPT1-207ENST00000539436 LINC01554Q52M75 96 aa8.55□□□□□ -1.04
TRPT1-207ENST00000539436 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
TRPT1-207ENST00000539436 SPRR2GQ9BYE4 73 aa8.54□□□□□ -1.04
TRPT1-207ENST00000539436 A0A0D9SG42 100 aa8.52□□□□□ -1.05
TRPT1-207ENST00000539436 A8MU10 97 aa8.52□□□□□ -1.05
TRPT1-207ENST00000539436 LCE2BO14633 110 aa8.41□□□□□ -1.06
TRPT1-207ENST00000539436 CDC42SE1Q9NRR8 79 aa8.38□□□□□ -1.07
TRPT1-207ENST00000539436 BRK1Q8WUW1 75 aa8.36□□□□□ -1.07
TRPT1-207ENST00000539436 KRTAP19-8Q3LI54 63 aa8.35□□□□□ -1.07
TRPT1-207ENST00000539436 SPINT4Q6UDR6 99 aa8.32□□□□□ -1.08
TRPT1-207ENST00000539436 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
TRPT1-207ENST00000539436 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
TRPT1-207ENST00000539436 MT1BP07438 61 aa8.29□□□□□ -1.08
TRPT1-207ENST00000539436 LCE2DQ5TA82 110 aaPredicted RBP8.28□□□□□ -1.08
TRPT1-207ENST00000539436 A6NN06 94 aa8.27□□□□□ -1.09
TRPT1-207ENST00000539436 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
TRPT1-207ENST00000539436 USH2AO75445 5202 aa8.16□□□□□ -1.1
TRPT1-207ENST00000539436 K7ERS5 55 aa8.15□□□□□ -1.11
TRPT1-207ENST00000539436 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
TRPT1-207ENST00000539436 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
TRPT1-207ENST00000539436 PRO0628Q9UI54 55 aa8□□□□□ -1.13
TRPT1-207ENST00000539436 FSIP2Q5CZC0 6907 aa7.98□□□□□ -1.13
TRPT1-207ENST00000539436 MT1XP80297 61 aa7.97□□□□□ -1.13
TRPT1-207ENST00000539436 KRTAP10-5P60370 271 aa7.96□□□□□ -1.14
TRPT1-207ENST00000539436 SSPOA2VEC9 5147 aa7.92□□□□□ -1.14
TRPT1-207ENST00000539436 KRTAP19-6Q3LI70 58 aa7.89□□□□□ -1.15
TRPT1-207ENST00000539436 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
TRPT1-207ENST00000539436 PMAIP1Q13794 54 aa7.89□□□□□ -1.15
TRPT1-207ENST00000539436 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
TRPT1-207ENST00000539436 ROMO1P60602 79 aa7.81□□□□□ -1.16
TRPT1-207ENST00000539436 CRCT1Q9UGL9 99 aa7.78□□□□□ -1.16
TRPT1-207ENST00000539436 SVIPQ8NHG7 77 aa7.76□□□□□ -1.17
TRPT1-207ENST00000539436 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
TRPT1-207ENST00000539436 TNP1P09430 55 aa7.65□□□□□ -1.18
TRPT1-207ENST00000539436 FCGBPQ9Y6R7 5405 aaPredicted RBP7.62□□□□□ -1.19
TRPT1-207ENST00000539436 KRTAP25-1Q3LHN0 102 aa7.58□□□□□ -1.2
TRPT1-207ENST00000539436 KRTAP9-6A0A140TA67 174 aa7.54□□□□□ -1.2
TRPT1-207ENST00000539436 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
TRPT1-207ENST00000539436 PRAC1Q96KF2 57 aa7.46□□□□□ -1.22
TRPT1-207ENST00000539436 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
TRPT1-207ENST00000539436 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
TRPT1-207ENST00000539436 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
TRPT1-207ENST00000539436 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
TRPT1-207ENST00000539436 KMT2DO14686 5537 aa7.36□□□□□ -1.23
TRPT1-207ENST00000539436 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
TRPT1-207ENST00000539436 MACF1Q9UPN3 7388 aaKnown RBP7.27□□□□□ -1.25
TRPT1-207ENST00000539436 PP632Q6XCG6 107 aa7.25□□□□□ -1.25
TRPT1-207ENST00000539436 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
TRPT1-207ENST00000539436 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.25
TRPT1-207ENST00000539436 KRTAP19-5Q3LI72 72 aa7.18□□□□□ -1.26
TRPT1-207ENST00000539436 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
TRPT1-207ENST00000539436 KRTAP12-3P60328 96 aa7.1□□□□□ -1.27
TRPT1-207ENST00000539436 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
TRPT1-207ENST00000539436 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
TRPT1-207ENST00000539436 MT1EP04732 61 aa6.99□□□□□ -1.29
TRPT1-207ENST00000539436 KRTAP5-9P26371 169 aa6.96□□□□□ -1.29
TRPT1-207ENST00000539436 KRTAP6-3Q3LI67 103 aa6.96□□□□□ -1.3
TRPT1-207ENST00000539436 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.31
TRPT1-207ENST00000539436 KRTAP9-7A8MTY7 169 aa6.88□□□□□ -1.31
TRPT1-207ENST00000539436 MUC12Q9UKN1 5478 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms