RNA–Protein interactions for RNA: ENST00000538740.1

DDX11-212, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-212ENST00000538740 KRTAP9-2Q9BYQ4 174 aa9.19□□□□□ -0.94
DDX11-212ENST00000538740 SPTSSBQ8NFR3 76 aa9.17□□□□□ -0.94
DDX11-212ENST00000538740 KRTAP3-1Q9BYR8 98 aa9.16□□□□□ -0.94
DDX11-212ENST00000538740 SMIM26A0A096LP01 95 aa9.15□□□□□ -0.94
DDX11-212ENST00000538740 H1FX-AS1Q4G0G2 97 aa9.15□□□□□ -0.94
DDX11-212ENST00000538740 KRTAP4-1Q9BYQ7 146 aa9.13□□□□□ -0.95
DDX11-212ENST00000538740 MUC17Q685J3 4493 aa9.09□□□□□ -0.95
DDX11-212ENST00000538740 S4R3F8 94 aa9.09□□□□□ -0.95
DDX11-212ENST00000538740 FAT4Q6V0I7 4981 aa9.07□□□□□ -0.96
DDX11-212ENST00000538740 V9GYY9 64 aa9.06□□□□□ -0.96
DDX11-212ENST00000538740 LCE2CQ5TA81 110 aa9.03□□□□□ -0.96
DDX11-212ENST00000538740 KRTAP9-6A0A140TA67 174 aa9.01□□□□□ -0.97
DDX11-212ENST00000538740 LCA10Q71F78 164 aa8.97□□□□□ -0.97
DDX11-212ENST00000538740 Q1T7F1 81 aa8.95□□□□□ -0.98
DDX11-212ENST00000538740 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
DDX11-212ENST00000538740 CSAG1Q6PB30 78 aa8.9□□□□□ -0.98
DDX11-212ENST00000538740 SEC61GP60059 68 aa8.89□□□□□ -0.99
DDX11-212ENST00000538740 PRR15LQ9BU68 103 aa8.89□□□□□ -0.99
DDX11-212ENST00000538740 KRTAP19-2Q3LHN2 52 aa8.88□□□□□ -0.99
DDX11-212ENST00000538740 A0A1B0GU69 56 aa8.84□□□□□ -0.99
DDX11-212ENST00000538740 LORP23490 312 aaPredicted RBP8.8□□□□□ -1
DDX11-212ENST00000538740 PSPHP1O15172 72 aa8.75□□□□□ -1.01
DDX11-212ENST00000538740 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
DDX11-212ENST00000538740 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
DDX11-212ENST00000538740 H0YAA0 97 aa8.7□□□□□ -1.02
DDX11-212ENST00000538740 Q5VV11 94 aa8.66□□□□□ -1.02
DDX11-212ENST00000538740 M0R2T5 61 aa8.65□□□□□ -1.02
DDX11-212ENST00000538740 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.03
DDX11-212ENST00000538740 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
DDX11-212ENST00000538740 CRCT1Q9UGL9 99 aa8.62□□□□□ -1.03
DDX11-212ENST00000538740 MT1HP80294 61 aa8.61□□□□□ -1.03
DDX11-212ENST00000538740 A6NED7 52 aa8.57□□□□□ -1.04
DDX11-212ENST00000538740 A0A1B0GU33 70 aa8.56□□□□□ -1.04
DDX11-212ENST00000538740 UQCR11O14957 56 aa8.56□□□□□ -1.04
DDX11-212ENST00000538740 FLGP20930 4061 aaPredicted RBP8.54□□□□□ -1.04
DDX11-212ENST00000538740 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
DDX11-212ENST00000538740 P0C880 135 aa8.48□□□□□ -1.05
DDX11-212ENST00000538740 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
DDX11-212ENST00000538740 M0QZ58 72 aa8.42□□□□□ -1.06
DDX11-212ENST00000538740 CRIPTQ9P021 101 aa8.4□□□□□ -1.06
DDX11-212ENST00000538740 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
DDX11-212ENST00000538740 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
DDX11-212ENST00000538740 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
DDX11-212ENST00000538740 R4GN34 69 aa8.38□□□□□ -1.07
DDX11-212ENST00000538740 MT2AP02795 61 aa8.26□□□□□ -1.09
DDX11-212ENST00000538740 KRTAP10-10P60014 251 aa8.26□□□□□ -1.09
DDX11-212ENST00000538740 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
DDX11-212ENST00000538740 KRTAP9-8Q9BYQ0 159 aa8.25□□□□□ -1.09
DDX11-212ENST00000538740 K7ERS5 55 aa8.21□□□□□ -1.1
DDX11-212ENST00000538740 PRO0628Q9UI54 55 aa8.19□□□□□ -1.1
DDX11-212ENST00000538740 A0A0D9SG42 100 aa8.18□□□□□ -1.1
DDX11-212ENST00000538740 MT1FP04733 61 aa8.18□□□□□ -1.1
DDX11-212ENST00000538740 A8MU10 97 aa8.17□□□□□ -1.1
DDX11-212ENST00000538740 LINC01554Q52M75 96 aa8.16□□□□□ -1.1
DDX11-212ENST00000538740 SPRR2GQ9BYE4 73 aa8.11□□□□□ -1.11
DDX11-212ENST00000538740 A6NN06 94 aa8.09□□□□□ -1.11
DDX11-212ENST00000538740 KRTAP9-7A8MTY7 169 aa8.05□□□□□ -1.12
DDX11-212ENST00000538740 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.05□□□□□ -1.12
DDX11-212ENST00000538740 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
DDX11-212ENST00000538740 KRTAP12-1P59990 96 aa8.01□□□□□ -1.13
DDX11-212ENST00000538740 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
DDX11-212ENST00000538740 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
DDX11-212ENST00000538740 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.14
DDX11-212ENST00000538740 KRTAP12-2P59991 146 aa7.95□□□□□ -1.14
DDX11-212ENST00000538740 PMAIP1Q13794 54 aa7.95□□□□□ -1.14
DDX11-212ENST00000538740 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
DDX11-212ENST00000538740 SSPOA2VEC9 5147 aa7.94□□□□□ -1.14
DDX11-212ENST00000538740 USH2AO75445 5202 aa7.94□□□□□ -1.14
DDX11-212ENST00000538740 KRTAP19-8Q3LI54 63 aa7.91□□□□□ -1.14
DDX11-212ENST00000538740 CAMK2N1Q7Z7J9 78 aa7.87□□□□□ -1.15
DDX11-212ENST00000538740 FCGBPQ9Y6R7 5405 aaPredicted RBP7.78□□□□□ -1.16
DDX11-212ENST00000538740 MT1BP07438 61 aa7.74□□□□□ -1.17
DDX11-212ENST00000538740 ROMO1P60602 79 aa7.73□□□□□ -1.17
DDX11-212ENST00000538740 MACF1Q9UPN3 7388 aaKnown RBP7.72□□□□□ -1.17
DDX11-212ENST00000538740 SYNE2Q8WXH0 6885 aaKnown RBP7.71□□□□□ -1.18
DDX11-212ENST00000538740 KTN1-AS1Q86SY8 53 aa7.61□□□□□ -1.19
DDX11-212ENST00000538740 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
DDX11-212ENST00000538740 KRTAP4-12Q9BQ66 201 aa7.57□□□□□ -1.2
DDX11-212ENST00000538740 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
DDX11-212ENST00000538740 KRTAP19-6Q3LI70 58 aa7.53□□□□□ -1.2
DDX11-212ENST00000538740 LCE3BQ5TA77 95 aa7.53□□□□□ -1.2
DDX11-212ENST00000538740 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
DDX11-212ENST00000538740 TNP1P09430 55 aa7.48□□□□□ -1.21
DDX11-212ENST00000538740 MT1XP80297 61 aa7.47□□□□□ -1.21
DDX11-212ENST00000538740 KRTAP9-9Q9BYP9 154 aa7.47□□□□□ -1.21
DDX11-212ENST00000538740 KRTAP9-4Q9BYQ2 154 aa7.47□□□□□ -1.21
DDX11-212ENST00000538740 KRTAP10-5P60370 271 aa7.46□□□□□ -1.22
DDX11-212ENST00000538740 KRTAP6-3Q3LI67 103 aa7.4□□□□□ -1.22
DDX11-212ENST00000538740 PRAC1Q96KF2 57 aa7.34□□□□□ -1.23
DDX11-212ENST00000538740 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
DDX11-212ENST00000538740 NEBP20929 6669 aa7.3□□□□□ -1.24
DDX11-212ENST00000538740 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
DDX11-212ENST00000538740 SVIPQ8NHG7 77 aa7.26□□□□□ -1.25
DDX11-212ENST00000538740 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
DDX11-212ENST00000538740 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
DDX11-212ENST00000538740 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.26
DDX11-212ENST00000538740 MUC12Q9UKN1 5478 aa7.11□□□□□ -1.27
DDX11-212ENST00000538740 KRTAP4-7Q9BYR0 210 aa7.08□□□□□ -1.28
DDX11-212ENST00000538740 LCE1DQ5T752 114 aa7.05□□□□□ -1.28
DDX11-212ENST00000538740 LCE3AQ5TA76 89 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms