RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
CLN6-202ENST00000538696 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
CLN6-202ENST00000538696 CHKB-CPT1BH3BT56 60 aa8.54□□□□□ -1.04
CLN6-202ENST00000538696 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
CLN6-202ENST00000538696 SMIM26A0A096LP01 95 aa8.46□□□□□ -1.06
CLN6-202ENST00000538696 S4R3F8 94 aa8.44□□□□□ -1.06
CLN6-202ENST00000538696 M0R2T5 61 aa8.42□□□□□ -1.06
CLN6-202ENST00000538696 LCA10Q71F78 164 aa8.41□□□□□ -1.06
CLN6-202ENST00000538696 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
CLN6-202ENST00000538696 SPTSSBQ8NFR3 76 aa8.35□□□□□ -1.07
CLN6-202ENST00000538696 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
CLN6-202ENST00000538696 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
CLN6-202ENST00000538696 Q1T7F1 81 aa8.3□□□□□ -1.08
CLN6-202ENST00000538696 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
CLN6-202ENST00000538696 V9GYY9 64 aa8.26□□□□□ -1.09
CLN6-202ENST00000538696 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
CLN6-202ENST00000538696 PRR15LQ9BU68 103 aa8.21□□□□□ -1.1
CLN6-202ENST00000538696 KRTAP9-8Q9BYQ0 159 aa8.2□□□□□ -1.1
CLN6-202ENST00000538696 PSPHP1O15172 72 aa8.19□□□□□ -1.1
CLN6-202ENST00000538696 A0A1B0GU69 56 aa8.16□□□□□ -1.1
CLN6-202ENST00000538696 MT2AP02795 61 aa8.15□□□□□ -1.1
CLN6-202ENST00000538696 Q5VV11 94 aa8.13□□□□□ -1.11
CLN6-202ENST00000538696 MT1FP04733 61 aa8.09□□□□□ -1.11
CLN6-202ENST00000538696 SEC61GP60059 68 aa8.09□□□□□ -1.11
CLN6-202ENST00000538696 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
CLN6-202ENST00000538696 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
CLN6-202ENST00000538696 H0YAA0 97 aa8.03□□□□□ -1.12
CLN6-202ENST00000538696 P0C880 135 aa8.03□□□□□ -1.12
CLN6-202ENST00000538696 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
CLN6-202ENST00000538696 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
CLN6-202ENST00000538696 A0A1B0GU33 70 aa7.94□□□□□ -1.14
CLN6-202ENST00000538696 A6NED7 52 aa7.93□□□□□ -1.14
CLN6-202ENST00000538696 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
CLN6-202ENST00000538696 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
CLN6-202ENST00000538696 UQCR11O14957 56 aa7.87□□□□□ -1.15
CLN6-202ENST00000538696 KRTAP13-4Q3LI77 160 aa7.85□□□□□ -1.15
CLN6-202ENST00000538696 SPATA8Q6RVD6 105 aa7.83□□□□□ -1.16
CLN6-202ENST00000538696 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
CLN6-202ENST00000538696 A8MU10 97 aa7.78□□□□□ -1.16
CLN6-202ENST00000538696 LCE2BO14633 110 aa7.78□□□□□ -1.16
CLN6-202ENST00000538696 BRK1Q8WUW1 75 aa7.78□□□□□ -1.16
CLN6-202ENST00000538696 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
CLN6-202ENST00000538696 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
CLN6-202ENST00000538696 M0QZ58 72 aa7.76□□□□□ -1.17
CLN6-202ENST00000538696 CRIPTQ9P021 101 aa7.75□□□□□ -1.17
CLN6-202ENST00000538696 USH2AO75445 5202 aa7.73□□□□□ -1.17
CLN6-202ENST00000538696 R4GN34 69 aa7.73□□□□□ -1.17
CLN6-202ENST00000538696 SPRR2GQ9BYE4 73 aa7.72□□□□□ -1.17
CLN6-202ENST00000538696 A0A0D9SG42 100 aa7.69□□□□□ -1.18
CLN6-202ENST00000538696 FSIP2Q5CZC0 6907 aa7.64□□□□□ -1.19
CLN6-202ENST00000538696 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
CLN6-202ENST00000538696 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
CLN6-202ENST00000538696 SSPOA2VEC9 5147 aa7.6□□□□□ -1.19
CLN6-202ENST00000538696 MT1BP07438 61 aa7.55□□□□□ -1.2
CLN6-202ENST00000538696 PRO0628Q9UI54 55 aa7.55□□□□□ -1.2
CLN6-202ENST00000538696 CRCT1Q9UGL9 99 aa7.54□□□□□ -1.2
CLN6-202ENST00000538696 SVIPQ8NHG7 77 aa7.53□□□□□ -1.2
CLN6-202ENST00000538696 KRTAP12-1P59990 96 aa7.52□□□□□ -1.2
CLN6-202ENST00000538696 KRTAP12-2P59991 146 aa7.51□□□□□ -1.21
CLN6-202ENST00000538696 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
CLN6-202ENST00000538696 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
CLN6-202ENST00000538696 A6NN06 94 aa7.46□□□□□ -1.22
CLN6-202ENST00000538696 K7ERS5 55 aa7.43□□□□□ -1.22
CLN6-202ENST00000538696 KRTAP19-6Q3LI70 58 aa7.42□□□□□ -1.22
CLN6-202ENST00000538696 PMAIP1Q13794 54 aa7.33□□□□□ -1.24
CLN6-202ENST00000538696 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
CLN6-202ENST00000538696 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
CLN6-202ENST00000538696 KRTAP10-5P60370 271 aa7.27□□□□□ -1.25
CLN6-202ENST00000538696 CAMK2N1Q7Z7J9 78 aa7.25□□□□□ -1.25
CLN6-202ENST00000538696 MT1XP80297 61 aa7.2□□□□□ -1.26
CLN6-202ENST00000538696 ROMO1P60602 79 aa7.16□□□□□ -1.26
CLN6-202ENST00000538696 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
CLN6-202ENST00000538696 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
CLN6-202ENST00000538696 MACF1Q9UPN3 7388 aaKnown RBP7.03□□□□□ -1.28
CLN6-202ENST00000538696 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.28
CLN6-202ENST00000538696 KTN1-AS1Q86SY8 53 aa7.02□□□□□ -1.28
CLN6-202ENST00000538696 PRAC1Q96KF2 57 aa6.96□□□□□ -1.3
CLN6-202ENST00000538696 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
CLN6-202ENST00000538696 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
CLN6-202ENST00000538696 TNP1P09430 55 aa6.88□□□□□ -1.31
CLN6-202ENST00000538696 SYNE2Q8WXH0 6885 aaKnown RBP6.87□□□□□ -1.31
CLN6-202ENST00000538696 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
CLN6-202ENST00000538696 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.32
CLN6-202ENST00000538696 KMT2DO14686 5537 aa6.77□□□□□ -1.33
CLN6-202ENST00000538696 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
CLN6-202ENST00000538696 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
CLN6-202ENST00000538696 KRTAP6-3Q3LI67 103 aa6.71□□□□□ -1.34
CLN6-202ENST00000538696 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
CLN6-202ENST00000538696 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
CLN6-202ENST00000538696 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
CLN6-202ENST00000538696 KRTAP5-9P26371 169 aa6.62□□□□□ -1.35
CLN6-202ENST00000538696 PP632Q6XCG6 107 aa6.61□□□□□ -1.35
CLN6-202ENST00000538696 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
CLN6-202ENST00000538696 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
CLN6-202ENST00000538696 NEBP20929 6669 aa6.44□□□□□ -1.38
CLN6-202ENST00000538696 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
CLN6-202ENST00000538696 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
CLN6-202ENST00000538696 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
CLN6-202ENST00000538696 MT1EP04732 61 aa6.35□□□□□ -1.39
CLN6-202ENST00000538696 MDN1Q9NU22 5596 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 441.4 ms