RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 COA5Q86WW8 74 aa10.15□□□□□ -0.78
COPS7A-208ENST00000538410 S4R3F8 94 aa10.12□□□□□ -0.79
COPS7A-208ENST00000538410 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
COPS7A-208ENST00000538410 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
COPS7A-208ENST00000538410 FLGP20930 4061 aaPredicted RBP10.09□□□□□ -0.79
COPS7A-208ENST00000538410 M0R2T5 61 aa10.08□□□□□ -0.8
COPS7A-208ENST00000538410 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
COPS7A-208ENST00000538410 LCA10Q71F78 164 aa10.07□□□□□ -0.8
COPS7A-208ENST00000538410 KRTAP9-6A0A140TA67 174 aa10.07□□□□□ -0.8
COPS7A-208ENST00000538410 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
COPS7A-208ENST00000538410 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
COPS7A-208ENST00000538410 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
COPS7A-208ENST00000538410 RPS28P62857 69 aaKnown RBP9.96□□□□□ -0.82
COPS7A-208ENST00000538410 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
COPS7A-208ENST00000538410 CSAG1Q6PB30 78 aa9.93□□□□□ -0.82
COPS7A-208ENST00000538410 CRCT1Q9UGL9 99 aa9.85□□□□□ -0.83
COPS7A-208ENST00000538410 FSIP2Q5CZC0 6907 aa9.85□□□□□ -0.83
COPS7A-208ENST00000538410 SMIM26A0A096LP01 95 aa9.78□□□□□ -0.84
COPS7A-208ENST00000538410 H0YAA0 97 aa9.69□□□□□ -0.86
COPS7A-208ENST00000538410 LINC01558Q9Y6Z2 57 aa9.68□□□□□ -0.86
COPS7A-208ENST00000538410 KRTAP9-8Q9BYQ0 159 aa9.67□□□□□ -0.86
COPS7A-208ENST00000538410 Q1T7F1 81 aa9.66□□□□□ -0.86
COPS7A-208ENST00000538410 V9GYY9 64 aa9.64□□□□□ -0.87
COPS7A-208ENST00000538410 ADM2Q7Z4H4 148 aa9.64□□□□□ -0.87
COPS7A-208ENST00000538410 SEC61GP60059 68 aa9.62□□□□□ -0.87
COPS7A-208ENST00000538410 A0A1B0GU69 56 aa9.6□□□□□ -0.87
COPS7A-208ENST00000538410 KRTAP3-2Q9BYR7 98 aa9.6□□□□□ -0.87
COPS7A-208ENST00000538410 PRR15LQ9BU68 103 aa9.55□□□□□ -0.88
COPS7A-208ENST00000538410 MT2AP02795 61 aa9.54□□□□□ -0.88
COPS7A-208ENST00000538410 P0C880 135 aa9.54□□□□□ -0.88
COPS7A-208ENST00000538410 PSPHP1O15172 72 aa9.49□□□□□ -0.89
COPS7A-208ENST00000538410 MT1FP04733 61 aa9.46□□□□□ -0.89
COPS7A-208ENST00000538410 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
COPS7A-208ENST00000538410 Q5VV11 94 aa9.41□□□□□ -0.9
COPS7A-208ENST00000538410 A0A1B0GU33 70 aa9.39□□□□□ -0.91
COPS7A-208ENST00000538410 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
COPS7A-208ENST00000538410 USH2AO75445 5202 aa9.36□□□□□ -0.91
COPS7A-208ENST00000538410 CRIPTQ9P021 101 aa9.35□□□□□ -0.91
COPS7A-208ENST00000538410 LCE2BO14633 110 aa9.33□□□□□ -0.92
COPS7A-208ENST00000538410 R4GN34 69 aa9.31□□□□□ -0.92
COPS7A-208ENST00000538410 SSPOA2VEC9 5147 aa9.3□□□□□ -0.92
COPS7A-208ENST00000538410 M0QZ58 72 aa9.29□□□□□ -0.92
COPS7A-208ENST00000538410 KRTAP13-4Q3LI77 160 aa9.28□□□□□ -0.92
COPS7A-208ENST00000538410 UQCR11O14957 56 aa9.27□□□□□ -0.92
COPS7A-208ENST00000538410 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
COPS7A-208ENST00000538410 SPRR2GQ9BYE4 73 aa9.21□□□□□ -0.93
COPS7A-208ENST00000538410 A6NED7 52 aa9.2□□□□□ -0.94
COPS7A-208ENST00000538410 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
COPS7A-208ENST00000538410 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.16□□□□□ -0.94
COPS7A-208ENST00000538410 MIR22HGQ0VDD5 57 aa9.14□□□□□ -0.95
COPS7A-208ENST00000538410 LINC01554Q52M75 96 aa9.11□□□□□ -0.95
COPS7A-208ENST00000538410 FCGBPQ9Y6R7 5405 aaPredicted RBP9.07□□□□□ -0.96
COPS7A-208ENST00000538410 A0A0D9SG42 100 aa9.07□□□□□ -0.96
COPS7A-208ENST00000538410 A8MU10 97 aa9.07□□□□□ -0.96
COPS7A-208ENST00000538410 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
COPS7A-208ENST00000538410 KRTAP19-6Q3LI70 58 aa9.02□□□□□ -0.97
COPS7A-208ENST00000538410 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.97
COPS7A-208ENST00000538410 KRTAP19-8Q3LI54 63 aa9.01□□□□□ -0.97
COPS7A-208ENST00000538410 A6NN06 94 aa8.97□□□□□ -0.97
COPS7A-208ENST00000538410 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
COPS7A-208ENST00000538410 BRK1Q8WUW1 75 aa8.91□□□□□ -0.98
COPS7A-208ENST00000538410 MT1BP07438 61 aa8.91□□□□□ -0.98
COPS7A-208ENST00000538410 SPINT4Q6UDR6 99 aa8.88□□□□□ -0.99
COPS7A-208ENST00000538410 KRTAP12-2P59991 146 aa8.87□□□□□ -0.99
COPS7A-208ENST00000538410 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
COPS7A-208ENST00000538410 MACF1Q9UPN3 7388 aaKnown RBP8.85□□□□□ -0.99
COPS7A-208ENST00000538410 K7ERS5 55 aa8.77□□□□□ -1.01
COPS7A-208ENST00000538410 SYNE2Q8WXH0 6885 aaKnown RBP8.73□□□□□ -1.01
COPS7A-208ENST00000538410 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
COPS7A-208ENST00000538410 PRO0628Q9UI54 55 aa8.59□□□□□ -1.03
COPS7A-208ENST00000538410 KRTAP6-3Q3LI67 103 aa8.57□□□□□ -1.04
COPS7A-208ENST00000538410 MT1XP80297 61 aa8.56□□□□□ -1.04
COPS7A-208ENST00000538410 KRTAP10-5P60370 271 aa8.54□□□□□ -1.04
COPS7A-208ENST00000538410 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
COPS7A-208ENST00000538410 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
COPS7A-208ENST00000538410 PMAIP1Q13794 54 aa8.42□□□□□ -1.06
COPS7A-208ENST00000538410 ROMO1P60602 79 aa8.38□□□□□ -1.07
COPS7A-208ENST00000538410 TNP1P09430 55 aa8.23□□□□□ -1.09
COPS7A-208ENST00000538410 KRTAP10-7P60409 375 aaPredicted RBP8.2□□□□□ -1.1
COPS7A-208ENST00000538410 NEBP20929 6669 aa8.19□□□□□ -1.1
COPS7A-208ENST00000538410 KRTAP25-1Q3LHN0 102 aa8.19□□□□□ -1.1
COPS7A-208ENST00000538410 KRTAP5-9P26371 169 aa8.17□□□□□ -1.1
COPS7A-208ENST00000538410 MUC12Q9UKN1 5478 aa8.15□□□□□ -1.11
COPS7A-208ENST00000538410 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
COPS7A-208ENST00000538410 KMT2DO14686 5537 aa8□□□□□ -1.13
COPS7A-208ENST00000538410 KTN1-AS1Q86SY8 53 aa8□□□□□ -1.13
COPS7A-208ENST00000538410 KRTAP20-1Q3LI63 56 aa7.95□□□□□ -1.14
COPS7A-208ENST00000538410 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
COPS7A-208ENST00000538410 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
COPS7A-208ENST00000538410 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
COPS7A-208ENST00000538410 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
COPS7A-208ENST00000538410 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
COPS7A-208ENST00000538410 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
COPS7A-208ENST00000538410 PRAC1Q96KF2 57 aa7.91□□□□□ -1.14
COPS7A-208ENST00000538410 MDN1Q9NU22 5596 aa7.89□□□□□ -1.15
COPS7A-208ENST00000538410 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
COPS7A-208ENST00000538410 SPRR2EP22531 72 aa7.83□□□□□ -1.16
COPS7A-208ENST00000538410 SPRR2BP35325 72 aa7.83□□□□□ -1.16
COPS7A-208ENST00000538410 SPRR2AP35326 72 aa7.83□□□□□ -1.16
COPS7A-208ENST00000538410 KRTAP2-3P0C7H8 128 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms