RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
SNHG1-208ENST00000538266 LINC00472Q9H8W2 130 aa2.41□□□□□ -2.02
SNHG1-208ENST00000538266 TP53AIP1Q9HCN2 124 aa2.41□□□□□ -2.02
SNHG1-208ENST00000538266 CHKB-CPT1BH3BT56 60 aa2.4□□□□□ -2.03
SNHG1-208ENST00000538266 SEC61GP60059 68 aa2.4□□□□□ -2.03
SNHG1-208ENST00000538266 TPRXLQ17RH7 258 aa2.4□□□□□ -2.03
SNHG1-208ENST00000538266 Q5VV11 94 aa2.4□□□□□ -2.03
SNHG1-208ENST00000538266 COA5Q86WW8 74 aa2.4□□□□□ -2.03
SNHG1-208ENST00000538266 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
SNHG1-208ENST00000538266 APOBP04114 4563 aaKnown RBP2.39□□□□□ -2.03
SNHG1-208ENST00000538266 DYNC1H1Q14204 4646 aaKnown RBP2.39□□□□□ -2.03
SNHG1-208ENST00000538266 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
SNHG1-208ENST00000538266 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
SNHG1-208ENST00000538266 LOC101927531A0A1B0GV80 90 aa2.38□□□□□ -2.03
SNHG1-208ENST00000538266 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
SNHG1-208ENST00000538266 VPS13BQ7Z7G8 4022 aa2.38□□□□□ -2.03
SNHG1-208ENST00000538266 A0A1B0GVX0 72 aa2.37□□□□□ -2.03
SNHG1-208ENST00000538266 A6NED7 52 aa2.37□□□□□ -2.03
SNHG1-208ENST00000538266 C9orf92A6NGG3 77 aa2.37□□□□□ -2.03
SNHG1-208ENST00000538266 KRTAP13-3Q3SY46 172 aa2.37□□□□□ -2.03
SNHG1-208ENST00000538266 ATP11AUNQ6ZP68 121 aa2.37□□□□□ -2.03
SNHG1-208ENST00000538266 KTN1-AS1Q86SY8 53 aa2.37□□□□□ -2.03
SNHG1-208ENST00000538266 NDUFS5O43920 106 aa2.36□□□□□ -2.03
SNHG1-208ENST00000538266 PCOTHQ58A44 107 aa2.36□□□□□ -2.03
SNHG1-208ENST00000538266 Q96NJ1 140 aa2.36□□□□□ -2.03
SNHG1-208ENST00000538266 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
SNHG1-208ENST00000538266 LINC01558Q9Y6Z2 57 aa2.36□□□□□ -2.03
SNHG1-208ENST00000538266 IGHV6-1A0A0B4J1U7 121 aa2.35□□□□□ -2.03
SNHG1-208ENST00000538266 A8MU10 97 aa2.35□□□□□ -2.03
SNHG1-208ENST00000538266 SPTSSBQ8NFR3 76 aa2.35□□□□□ -2.03
SNHG1-208ENST00000538266 MRPL34Q9BQ48 92 aaKnown RBP2.35□□□□□ -2.03
SNHG1-208ENST00000538266 RYR1P21817 5038 aa2.34□□□□□ -2.03
SNHG1-208ENST00000538266 A6NN06 94 aa2.34□□□□□ -2.03
SNHG1-208ENST00000538266 LINC00313P59037 77 aa2.34□□□□□ -2.03
SNHG1-208ENST00000538266 FAT1Q14517 4588 aa2.34□□□□□ -2.04
SNHG1-208ENST00000538266 DNAH8Q96JB1 4490 aa2.33□□□□□ -2.04
SNHG1-208ENST00000538266 C8orf87E5RJ46 101 aa2.33□□□□□ -2.04
SNHG1-208ENST00000538266 HRES1P13985 223 aa2.33□□□□□ -2.04
SNHG1-208ENST00000538266 C7orf65Q6ZTY9 151 aa2.33□□□□□ -2.04
SNHG1-208ENST00000538266 MYCBP2O75592 4640 aa2.33□□□□□ -2.04
SNHG1-208ENST00000538266 HERC2O95714 4834 aa2.33□□□□□ -2.04
SNHG1-208ENST00000538266 LCA10Q71F78 164 aa2.32□□□□□ -2.04
SNHG1-208ENST00000538266 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
SNHG1-208ENST00000538266 PCLOQ9Y6V0 5065 aa2.3□□□□□ -2.04
SNHG1-208ENST00000538266 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
SNHG1-208ENST00000538266 ACYP2P14621 99 aa2.3□□□□□ -2.04
SNHG1-208ENST00000538266 C20orf166-AS1Q96NR2 134 aa2.3□□□□□ -2.04
SNHG1-208ENST00000538266 RBM12B-AS1Q9P1G2 102 aa2.3□□□□□ -2.04
SNHG1-208ENST00000538266 A8MUU9 505 aa2.29□□□□□ -2.04
SNHG1-208ENST00000538266 SPINK7P58062 85 aa2.29□□□□□ -2.04
SNHG1-208ENST00000538266 DMAC1Q96GE9 116 aa2.29□□□□□ -2.04
SNHG1-208ENST00000538266 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.05
SNHG1-208ENST00000538266 LCE3EQ5T5B0 92 aa2.27□□□□□ -2.05
SNHG1-208ENST00000538266 Q5W150 140 aa2.27□□□□□ -2.05
SNHG1-208ENST00000538266 ABCA13Q86UQ4 5058 aa2.26□□□□□ -2.05
SNHG1-208ENST00000538266 A0A1B0GU69 56 aa2.26□□□□□ -2.05
SNHG1-208ENST00000538266 TNXBP22105 4242 aa2.24□□□□□ -2.05
SNHG1-208ENST00000538266 UQCR11O14957 56 aa2.23□□□□□ -2.05
SNHG1-208ENST00000538266 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
SNHG1-208ENST00000538266 SPATA8Q6RVD6 105 aa2.23□□□□□ -2.05
SNHG1-208ENST00000538266 KRTAP4-1Q9BYQ7 146 aa2.23□□□□□ -2.05
SNHG1-208ENST00000538266 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
SNHG1-208ENST00000538266 COX6B2Q6YFQ2 88 aa2.22□□□□□ -2.05
SNHG1-208ENST00000538266 FAT3Q8TDW7 4589 aa2.22□□□□□ -2.05
SNHG1-208ENST00000538266 LINC01554Q52M75 96 aa2.18□□□□□ -2.06
SNHG1-208ENST00000538266 ADM2Q7Z4H4 148 aa2.17□□□□□ -2.06
SNHG1-208ENST00000538266 M0R2T5 61 aa2.16□□□□□ -2.06
SNHG1-208ENST00000538266 HERC1Q15751 4861 aa2.15□□□□□ -2.06
SNHG1-208ENST00000538266 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.07
SNHG1-208ENST00000538266 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
SNHG1-208ENST00000538266 LPAP08519 4548 aa2.15□□□□□ -2.07
SNHG1-208ENST00000538266 CSAG1Q6PB30 78 aa2.14□□□□□ -2.07
SNHG1-208ENST00000538266 MT1HP80294 61 aa2.13□□□□□ -2.07
SNHG1-208ENST00000538266 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
SNHG1-208ENST00000538266 LRP2P98164 4655 aa2.12□□□□□ -2.07
SNHG1-208ENST00000538266 H0YAA0 97 aa2.12□□□□□ -2.07
SNHG1-208ENST00000538266 K7ERS5 55 aa2.12□□□□□ -2.07
SNHG1-208ENST00000538266 A0A1B0GU33 70 aa2.11□□□□□ -2.07
SNHG1-208ENST00000538266 KRTAP25-1Q3LHN0 102 aa2.1□□□□□ -2.07
SNHG1-208ENST00000538266 S4R3F8 94 aa2.09□□□□□ -2.07
SNHG1-208ENST00000538266 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.08
SNHG1-208ENST00000538266 UBR4Q5T4S7 5183 aa2.08□□□□□ -2.08
SNHG1-208ENST00000538266 ROMO1P60602 79 aa2.04□□□□□ -2.08
SNHG1-208ENST00000538266 MUC2Q02817 5179 aa2.03□□□□□ -2.08
SNHG1-208ENST00000538266 KRTAP10-10P60014 251 aa2.03□□□□□ -2.08
SNHG1-208ENST00000538266 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
SNHG1-208ENST00000538266 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
SNHG1-208ENST00000538266 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
SNHG1-208ENST00000538266 MT2AP02795 61 aa2.01□□□□□ -2.09
SNHG1-208ENST00000538266 MT1FP04733 61 aa2□□□□□ -2.09
SNHG1-208ENST00000538266 RNF213Q63HN8 5207 aa2□□□□□ -2.09
SNHG1-208ENST00000538266 A0A0D9SG42 100 aa1.99□□□□□ -2.09
SNHG1-208ENST00000538266 MUC17Q685J3 4493 aa1.99□□□□□ -2.09
SNHG1-208ENST00000538266 CRIPTQ9P021 101 aa1.98□□□□□ -2.09
SNHG1-208ENST00000538266 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
SNHG1-208ENST00000538266 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
SNHG1-208ENST00000538266 P0C880 135 aa1.94□□□□□ -2.1
SNHG1-208ENST00000538266 M0QZ58 72 aa1.93□□□□□ -2.1
SNHG1-208ENST00000538266 R4GN34 69 aa1.93□□□□□ -2.1
SNHG1-208ENST00000538266 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms