RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
NPIPB3-208ENST00000537983 OXTP01178 125 aa3.02□□□□□ -1.93
NPIPB3-208ENST00000537983 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
NPIPB3-208ENST00000537983 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
NPIPB3-208ENST00000537983 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
NPIPB3-208ENST00000537983 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
NPIPB3-208ENST00000537983 C20orf166-AS1Q96NR2 134 aa3.01□□□□□ -1.93
NPIPB3-208ENST00000537983 CYP4F30PQ9H0H9 118 aa3.01□□□□□ -1.93
NPIPB3-208ENST00000537983 FLG2Q5D862 2391 aaPredicted RBP3.01□□□□□ -1.93
NPIPB3-208ENST00000537983 A8MUU9 505 aa3□□□□□ -1.93
NPIPB3-208ENST00000537983 Q5W150 140 aa3□□□□□ -1.93
NPIPB3-208ENST00000537983 RETNLBQ9BQ08 111 aa3□□□□□ -1.93
NPIPB3-208ENST00000537983 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
NPIPB3-208ENST00000537983 LRP1Q07954 4544 aaKnown RBP2.98□□□□□ -1.93
NPIPB3-208ENST00000537983 C9orf92A6NGG3 77 aa2.98□□□□□ -1.93
NPIPB3-208ENST00000537983 PCOTHQ58A44 107 aa2.97□□□□□ -1.93
NPIPB3-208ENST00000537983 C7orf65Q6ZTY9 151 aa2.97□□□□□ -1.93
NPIPB3-208ENST00000537983 KIAA1109Q2LD37 5005 aa2.97□□□□□ -1.93
NPIPB3-208ENST00000537983 BIRC6Q9NR09 4857 aa2.94□□□□□ -1.94
NPIPB3-208ENST00000537983 PRR4Q16378 134 aa2.94□□□□□ -1.94
NPIPB3-208ENST00000537983 MYCBP2O75592 4640 aa2.93□□□□□ -1.94
NPIPB3-208ENST00000537983 SMIM26A0A096LP01 95 aa2.93□□□□□ -1.94
NPIPB3-208ENST00000537983 HRES1P13985 223 aa2.93□□□□□ -1.94
NPIPB3-208ENST00000537983 RPL37P61927 97 aaKnown RBP2.93□□□□□ -1.94
NPIPB3-208ENST00000537983 TPRXLQ17RH7 258 aa2.93□□□□□ -1.94
NPIPB3-208ENST00000537983 DMAC1Q96GE9 116 aa2.93□□□□□ -1.94
NPIPB3-208ENST00000537983 COA5Q86WW8 74 aa2.92□□□□□ -1.94
NPIPB3-208ENST00000537983 ATP11AUNQ6ZP68 121 aa2.91□□□□□ -1.94
NPIPB3-208ENST00000537983 HERC2O95714 4834 aa2.9□□□□□ -1.94
NPIPB3-208ENST00000537983 A8MUN3 132 aa2.9□□□□□ -1.95
NPIPB3-208ENST00000537983 ACYP2P14621 99 aa2.9□□□□□ -1.95
NPIPB3-208ENST00000537983 DMBT1Q9UGM3 2413 aaPredicted RBP2.89□□□□□ -1.95
NPIPB3-208ENST00000537983 SPINK7P58062 85 aa2.88□□□□□ -1.95
NPIPB3-208ENST00000537983 V9GYY9 64 aa2.88□□□□□ -1.95
NPIPB3-208ENST00000537983 Q1T7F1 81 aa2.87□□□□□ -1.95
NPIPB3-208ENST00000537983 CHKB-CPT1BH3BT56 60 aa2.86□□□□□ -1.95
NPIPB3-208ENST00000537983 C4orf26Q17RF5 130 aa2.85□□□□□ -1.95
NPIPB3-208ENST00000537983 ABCA13Q86UQ4 5058 aa2.84□□□□□ -1.95
NPIPB3-208ENST00000537983 COX6B2Q6YFQ2 88 aa2.84□□□□□ -1.95
NPIPB3-208ENST00000537983 A8MU10 97 aa2.83□□□□□ -1.96
NPIPB3-208ENST00000537983 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
NPIPB3-208ENST00000537983 SPTSSBQ8NFR3 76 aa2.82□□□□□ -1.96
NPIPB3-208ENST00000537983 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
NPIPB3-208ENST00000537983 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
NPIPB3-208ENST00000537983 PRR15LQ9BU68 103 aa2.79□□□□□ -1.96
NPIPB3-208ENST00000537983 PSPHP1O15172 72 aa2.78□□□□□ -1.96
NPIPB3-208ENST00000537983 Q5VV11 94 aa2.78□□□□□ -1.96
NPIPB3-208ENST00000537983 RBM12B-AS1Q9P1G2 102 aa2.78□□□□□ -1.96
NPIPB3-208ENST00000537983 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
NPIPB3-208ENST00000537983 LPAP08519 4548 aa2.76□□□□□ -1.97
NPIPB3-208ENST00000537983 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
NPIPB3-208ENST00000537983 LRP2P98164 4655 aa2.75□□□□□ -1.97
NPIPB3-208ENST00000537983 A0A1B0GU69 56 aa2.75□□□□□ -1.97
NPIPB3-208ENST00000537983 H1FX-AS1Q4G0G2 97 aa2.75□□□□□ -1.97
NPIPB3-208ENST00000537983 S4R3F8 94 aa2.75□□□□□ -1.97
NPIPB3-208ENST00000537983 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
NPIPB3-208ENST00000537983 SEC61GP60059 68 aa2.74□□□□□ -1.97
NPIPB3-208ENST00000537983 LCA10Q71F78 164 aa2.73□□□□□ -1.97
NPIPB3-208ENST00000537983 A6NED7 52 aa2.72□□□□□ -1.97
NPIPB3-208ENST00000537983 BRK1Q8WUW1 75 aa2.72□□□□□ -1.97
NPIPB3-208ENST00000537983 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
NPIPB3-208ENST00000537983 CDC42SE1Q9NRR8 79 aa2.7□□□□□ -1.98
NPIPB3-208ENST00000537983 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
NPIPB3-208ENST00000537983 HERC1Q15751 4861 aa2.7□□□□□ -1.98
NPIPB3-208ENST00000537983 UQCR11O14957 56 aa2.69□□□□□ -1.98
NPIPB3-208ENST00000537983 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
NPIPB3-208ENST00000537983 KRTAP12-2P59991 146 aa2.67□□□□□ -1.98
NPIPB3-208ENST00000537983 CSAG1Q6PB30 78 aa2.67□□□□□ -1.98
NPIPB3-208ENST00000537983 H0YAA0 97 aa2.66□□□□□ -1.98
NPIPB3-208ENST00000537983 KRTAP19-2Q3LHN2 52 aa2.66□□□□□ -1.98
NPIPB3-208ENST00000537983 A0A1B0GU33 70 aa2.65□□□□□ -1.99
NPIPB3-208ENST00000537983 MIR22HGQ0VDD5 57 aa2.65□□□□□ -1.99
NPIPB3-208ENST00000537983 SPATA8Q6RVD6 105 aa2.65□□□□□ -1.99
NPIPB3-208ENST00000537983 ADM2Q7Z4H4 148 aa2.62□□□□□ -1.99
NPIPB3-208ENST00000537983 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
NPIPB3-208ENST00000537983 P0C880 135 aa2.6□□□□□ -1.99
NPIPB3-208ENST00000537983 M0QZ58 72 aa2.57□□□□□ -2
NPIPB3-208ENST00000537983 A6NN06 94 aa2.56□□□□□ -2
NPIPB3-208ENST00000537983 PMAIP1Q13794 54 aa2.56□□□□□ -2
NPIPB3-208ENST00000537983 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
NPIPB3-208ENST00000537983 K7ERS5 55 aa2.55□□□□□ -2
NPIPB3-208ENST00000537983 MT1HP80294 61 aa2.53□□□□□ -2
NPIPB3-208ENST00000537983 R4GN34 69 aa2.53□□□□□ -2
NPIPB3-208ENST00000537983 A0A0D9SG42 100 aa2.52□□□□□ -2.01
NPIPB3-208ENST00000537983 CRIPTQ9P021 101 aa2.52□□□□□ -2.01
NPIPB3-208ENST00000537983 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
NPIPB3-208ENST00000537983 MUC2Q02817 5179 aa2.51□□□□□ -2.01
NPIPB3-208ENST00000537983 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
NPIPB3-208ENST00000537983 M0R2T5 61 aa2.5□□□□□ -2.01
NPIPB3-208ENST00000537983 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
NPIPB3-208ENST00000537983 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
NPIPB3-208ENST00000537983 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
NPIPB3-208ENST00000537983 LINC01554Q52M75 96 aa2.46□□□□□ -2.02
NPIPB3-208ENST00000537983 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
NPIPB3-208ENST00000537983 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
NPIPB3-208ENST00000537983 MT2AP02795 61 aa2.44□□□□□ -2.02
NPIPB3-208ENST00000537983 ROMO1P60602 79 aa2.43□□□□□ -2.02
NPIPB3-208ENST00000537983 CAMK2N1Q7Z7J9 78 aa2.43□□□□□ -2.02
NPIPB3-208ENST00000537983 SPRR2GQ9BYE4 73 aa2.43□□□□□ -2.02
NPIPB3-208ENST00000537983 MT1FP04733 61 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms