RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 LCE2AQ5TA79 106 aaPredicted RBP6.22□□□□□ -1.41
SNHG1-206ENST00000537925 CDC42SE1Q9NRR8 79 aa6.22□□□□□ -1.41
SNHG1-206ENST00000537925 A6NED7 52 aa6.21□□□□□ -1.42
SNHG1-206ENST00000537925 SEC61BP60468 96 aaKnown RBP6.21□□□□□ -1.42
SNHG1-206ENST00000537925 ATP11AUNQ6ZP68 121 aa6.2□□□□□ -1.42
SNHG1-206ENST00000537925 LCA10Q71F78 164 aa6.18□□□□□ -1.42
SNHG1-206ENST00000537925 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
SNHG1-206ENST00000537925 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.43
SNHG1-206ENST00000537925 RPL37P61927 97 aaKnown RBP6.15□□□□□ -1.43
SNHG1-206ENST00000537925 KRTAP4-1Q9BYQ7 146 aa6.15□□□□□ -1.43
SNHG1-206ENST00000537925 PMAIP1Q13794 54 aa6.14□□□□□ -1.43
SNHG1-206ENST00000537925 C7orf65Q6ZTY9 151 aa6.13□□□□□ -1.43
SNHG1-206ENST00000537925 A8MU10 97 aa6.12□□□□□ -1.43
SNHG1-206ENST00000537925 SPINK7P58062 85 aa6.09□□□□□ -1.43
SNHG1-206ENST00000537925 C20orf166-AS1Q96NR2 134 aa6.09□□□□□ -1.43
SNHG1-206ENST00000537925 KRTAP3-3Q9BYR6 98 aa6.09□□□□□ -1.43
SNHG1-206ENST00000537925 KRTAP3-2Q9BYR7 98 aa6.09□□□□□ -1.43
SNHG1-206ENST00000537925 A8MUU9 505 aa6.09□□□□□ -1.44
SNHG1-206ENST00000537925 A0A1B0GU69 56 aa6.08□□□□□ -1.44
SNHG1-206ENST00000537925 A6NN06 94 aa6.07□□□□□ -1.44
SNHG1-206ENST00000537925 SPTSSBQ8NFR3 76 aa6.05□□□□□ -1.44
SNHG1-206ENST00000537925 KTN1-AS1Q86SY8 53 aa6.04□□□□□ -1.44
SNHG1-206ENST00000537925 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
SNHG1-206ENST00000537925 UQCR11O14957 56 aa5.99□□□□□ -1.45
SNHG1-206ENST00000537925 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
SNHG1-206ENST00000537925 KRTAP9-7A8MTY7 169 aa5.97□□□□□ -1.45
SNHG1-206ENST00000537925 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
SNHG1-206ENST00000537925 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
SNHG1-206ENST00000537925 SEC61GP60059 68 aa5.92□□□□□ -1.46
SNHG1-206ENST00000537925 FLGP20930 4061 aaPredicted RBP5.91□□□□□ -1.46
SNHG1-206ENST00000537925 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
SNHG1-206ENST00000537925 MT1HP80294 61 aa5.86□□□□□ -1.47
SNHG1-206ENST00000537925 COX6B2Q6YFQ2 88 aa5.86□□□□□ -1.47
SNHG1-206ENST00000537925 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-206ENST00000537925 RBM12B-AS1Q9P1G2 102 aa5.8□□□□□ -1.48
SNHG1-206ENST00000537925 A0A1B0GU33 70 aa5.76□□□□□ -1.49
SNHG1-206ENST00000537925 H1FX-AS1Q4G0G2 97 aa5.76□□□□□ -1.49
SNHG1-206ENST00000537925 H0YAA0 97 aa5.75□□□□□ -1.49
SNHG1-206ENST00000537925 M0R2T5 61 aa5.74□□□□□ -1.49
SNHG1-206ENST00000537925 LORP23490 312 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-206ENST00000537925 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
SNHG1-206ENST00000537925 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
SNHG1-206ENST00000537925 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
SNHG1-206ENST00000537925 S4R3F8 94 aa5.63□□□□□ -1.51
SNHG1-206ENST00000537925 K7ERS5 55 aa5.61□□□□□ -1.51
SNHG1-206ENST00000537925 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
SNHG1-206ENST00000537925 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
SNHG1-206ENST00000537925 CSAG1Q6PB30 78 aa5.54□□□□□ -1.52
SNHG1-206ENST00000537925 MT2AP02795 61 aa5.51□□□□□ -1.53
SNHG1-206ENST00000537925 KRTAP25-1Q3LHN0 102 aa5.48□□□□□ -1.53
SNHG1-206ENST00000537925 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
SNHG1-206ENST00000537925 MT1FP04733 61 aa5.46□□□□□ -1.53
SNHG1-206ENST00000537925 SSPOA2VEC9 5147 aa5.46□□□□□ -1.54
SNHG1-206ENST00000537925 ROMO1P60602 79 aa5.45□□□□□ -1.54
SNHG1-206ENST00000537925 P0C880 135 aa5.44□□□□□ -1.54
SNHG1-206ENST00000537925 USH2AO75445 5202 aa5.43□□□□□ -1.54
SNHG1-206ENST00000537925 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
SNHG1-206ENST00000537925 M0QZ58 72 aa5.41□□□□□ -1.54
SNHG1-206ENST00000537925 SYNE2Q8WXH0 6885 aaKnown RBP5.41□□□□□ -1.54
SNHG1-206ENST00000537925 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-206ENST00000537925 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
SNHG1-206ENST00000537925 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
SNHG1-206ENST00000537925 A0A0D9SG42 100 aa5.37□□□□□ -1.55
SNHG1-206ENST00000537925 LCE2BO14633 110 aa5.34□□□□□ -1.55
SNHG1-206ENST00000537925 KRTAP12-1P59990 96 aa5.32□□□□□ -1.56
SNHG1-206ENST00000537925 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
SNHG1-206ENST00000537925 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
SNHG1-206ENST00000537925 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
SNHG1-206ENST00000537925 SPINT4Q6UDR6 99 aa5.22□□□□□ -1.57
SNHG1-206ENST00000537925 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
SNHG1-206ENST00000537925 NEBP20929 6669 aa5.2□□□□□ -1.58
SNHG1-206ENST00000537925 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
SNHG1-206ENST00000537925 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
SNHG1-206ENST00000537925 R4GN34 69 aa5.2□□□□□ -1.58
SNHG1-206ENST00000537925 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
SNHG1-206ENST00000537925 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
SNHG1-206ENST00000537925 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
SNHG1-206ENST00000537925 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
SNHG1-206ENST00000537925 KRTAP19-8Q3LI54 63 aa5.1□□□□□ -1.59
SNHG1-206ENST00000537925 MT1BP07438 61 aa5.07□□□□□ -1.6
SNHG1-206ENST00000537925 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
SNHG1-206ENST00000537925 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
SNHG1-206ENST00000537925 PP632Q6XCG6 107 aa4.94□□□□□ -1.62
SNHG1-206ENST00000537925 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
SNHG1-206ENST00000537925 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.62
SNHG1-206ENST00000537925 H3BS24 57 aa4.88□□□□□ -1.63
SNHG1-206ENST00000537925 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
SNHG1-206ENST00000537925 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
SNHG1-206ENST00000537925 KRTAP2-4Q9BYR9 128 aa4.86□□□□□ -1.63
SNHG1-206ENST00000537925 PLAC4Q8WY50 150 aa4.84□□□□□ -1.63
SNHG1-206ENST00000537925 KMT2DO14686 5537 aa4.82□□□□□ -1.64
SNHG1-206ENST00000537925 GPR98Q8WXG9 6306 aa4.8□□□□□ -1.64
SNHG1-206ENST00000537925 MT1XP80297 61 aa4.8□□□□□ -1.64
SNHG1-206ENST00000537925 TNP1P09430 55 aa4.78□□□□□ -1.64
SNHG1-206ENST00000537925 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
SNHG1-206ENST00000537925 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
SNHG1-206ENST00000537925 MDN1Q9NU22 5596 aa4.73□□□□□ -1.65
SNHG1-206ENST00000537925 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
SNHG1-206ENST00000537925 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
SNHG1-206ENST00000537925 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms