RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
SFSWAP-206ENST00000537582 DMAC1Q96GE9 116 aa7.84□□□□□ -1.15
SFSWAP-206ENST00000537582 A8MUN3 132 aa7.83□□□□□ -1.16
SFSWAP-206ENST00000537582 PSPHP1O15172 72 aa7.83□□□□□ -1.16
SFSWAP-206ENST00000537582 BRK1Q8WUW1 75 aa7.83□□□□□ -1.16
SFSWAP-206ENST00000537582 ACYP2P14621 99 aa7.82□□□□□ -1.16
SFSWAP-206ENST00000537582 FAT4Q6V0I7 4981 aa7.81□□□□□ -1.16
SFSWAP-206ENST00000537582 Q5VV11 94 aa7.81□□□□□ -1.16
SFSWAP-206ENST00000537582 LINC01558Q9Y6Z2 57 aa7.8□□□□□ -1.16
SFSWAP-206ENST00000537582 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
SFSWAP-206ENST00000537582 H1FX-AS1Q4G0G2 97 aa7.74□□□□□ -1.17
SFSWAP-206ENST00000537582 FLGP20930 4061 aaPredicted RBP7.7□□□□□ -1.18
SFSWAP-206ENST00000537582 CHKB-CPT1BH3BT56 60 aa7.69□□□□□ -1.18
SFSWAP-206ENST00000537582 MT1HP80294 61 aa7.69□□□□□ -1.18
SFSWAP-206ENST00000537582 LCA10Q71F78 164 aa7.63□□□□□ -1.19
SFSWAP-206ENST00000537582 S4R3F8 94 aa7.63□□□□□ -1.19
SFSWAP-206ENST00000537582 A6NED7 52 aa7.6□□□□□ -1.19
SFSWAP-206ENST00000537582 KRTAP3-3Q9BYR6 98 aa7.6□□□□□ -1.19
SFSWAP-206ENST00000537582 CDC42SE1Q9NRR8 79 aa7.58□□□□□ -1.2
SFSWAP-206ENST00000537582 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
SFSWAP-206ENST00000537582 M0R2T5 61 aa7.56□□□□□ -1.2
SFSWAP-206ENST00000537582 A8MU10 97 aa7.53□□□□□ -1.2
SFSWAP-206ENST00000537582 A0A1B0GU69 56 aa7.51□□□□□ -1.21
SFSWAP-206ENST00000537582 SPTSSBQ8NFR3 76 aa7.48□□□□□ -1.21
SFSWAP-206ENST00000537582 CSAG1Q6PB30 78 aa7.46□□□□□ -1.21
SFSWAP-206ENST00000537582 KRTAP10-6P60371 365 aaPredicted RBP7.44□□□□□ -1.22
SFSWAP-206ENST00000537582 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
SFSWAP-206ENST00000537582 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.22
SFSWAP-206ENST00000537582 PMAIP1Q13794 54 aa7.39□□□□□ -1.23
SFSWAP-206ENST00000537582 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
SFSWAP-206ENST00000537582 UQCR11O14957 56 aa7.37□□□□□ -1.23
SFSWAP-206ENST00000537582 A6NN06 94 aa7.37□□□□□ -1.23
SFSWAP-206ENST00000537582 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
SFSWAP-206ENST00000537582 SEC61GP60059 68 aa7.34□□□□□ -1.23
SFSWAP-206ENST00000537582 MT2AP02795 61 aa7.33□□□□□ -1.24
SFSWAP-206ENST00000537582 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
SFSWAP-206ENST00000537582 MT1FP04733 61 aa7.29□□□□□ -1.24
SFSWAP-206ENST00000537582 ADM2Q7Z4H4 148 aa7.29□□□□□ -1.24
SFSWAP-206ENST00000537582 KTN1-AS1Q86SY8 53 aa7.27□□□□□ -1.25
SFSWAP-206ENST00000537582 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
SFSWAP-206ENST00000537582 H0YAA0 97 aa7.25□□□□□ -1.25
SFSWAP-206ENST00000537582 P0C880 135 aa7.24□□□□□ -1.25
SFSWAP-206ENST00000537582 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
SFSWAP-206ENST00000537582 A0A1B0GU33 70 aa7.16□□□□□ -1.26
SFSWAP-206ENST00000537582 KRTAP9-3Q9BYQ3 159 aa7.11□□□□□ -1.27
SFSWAP-206ENST00000537582 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
SFSWAP-206ENST00000537582 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
SFSWAP-206ENST00000537582 M0QZ58 72 aa7.01□□□□□ -1.29
SFSWAP-206ENST00000537582 CRIPTQ9P021 101 aa7□□□□□ -1.29
SFSWAP-206ENST00000537582 R4GN34 69 aa7□□□□□ -1.29
SFSWAP-206ENST00000537582 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
SFSWAP-206ENST00000537582 LCE2BO14633 110 aa6.99□□□□□ -1.29
SFSWAP-206ENST00000537582 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
SFSWAP-206ENST00000537582 K7ERS5 55 aa6.91□□□□□ -1.3
SFSWAP-206ENST00000537582 PRAC1Q96KF2 57 aa6.9□□□□□ -1.31
SFSWAP-206ENST00000537582 USH2AO75445 5202 aa6.88□□□□□ -1.31
SFSWAP-206ENST00000537582 KRTAP19-8Q3LI54 63 aa6.86□□□□□ -1.31
SFSWAP-206ENST00000537582 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
SFSWAP-206ENST00000537582 A0A0D9SG42 100 aa6.85□□□□□ -1.31
SFSWAP-206ENST00000537582 MT1BP07438 61 aa6.84□□□□□ -1.31
SFSWAP-206ENST00000537582 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.32
SFSWAP-206ENST00000537582 ROMO1P60602 79 aa6.71□□□□□ -1.34
SFSWAP-206ENST00000537582 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
SFSWAP-206ENST00000537582 KRTAP12-1P59990 96 aa6.69□□□□□ -1.34
SFSWAP-206ENST00000537582 KRTAP12-2P59991 146 aa6.69□□□□□ -1.34
SFSWAP-206ENST00000537582 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
SFSWAP-206ENST00000537582 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
SFSWAP-206ENST00000537582 PLAC4Q8WY50 150 aa6.67□□□□□ -1.34
SFSWAP-206ENST00000537582 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
SFSWAP-206ENST00000537582 MT1XP80297 61 aa6.56□□□□□ -1.36
SFSWAP-206ENST00000537582 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
SFSWAP-206ENST00000537582 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
SFSWAP-206ENST00000537582 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
SFSWAP-206ENST00000537582 FCGBPQ9Y6R7 5405 aaPredicted RBP6.47□□□□□ -1.37
SFSWAP-206ENST00000537582 KRTAP9-6A0A140TA67 174 aa6.41□□□□□ -1.38
SFSWAP-206ENST00000537582 PRO2289Q9P1D8 64 aa6.41□□□□□ -1.38
SFSWAP-206ENST00000537582 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
SFSWAP-206ENST00000537582 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
SFSWAP-206ENST00000537582 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
SFSWAP-206ENST00000537582 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
SFSWAP-206ENST00000537582 KMT2DO14686 5537 aa6.16□□□□□ -1.42
SFSWAP-206ENST00000537582 TNP1P09430 55 aa6.14□□□□□ -1.43
SFSWAP-206ENST00000537582 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
SFSWAP-206ENST00000537582 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
SFSWAP-206ENST00000537582 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
SFSWAP-206ENST00000537582 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
SFSWAP-206ENST00000537582 PP632Q6XCG6 107 aa6.09□□□□□ -1.43
SFSWAP-206ENST00000537582 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
SFSWAP-206ENST00000537582 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
SFSWAP-206ENST00000537582 KRTAP23-1A1A580 65 aa6.01□□□□□ -1.45
SFSWAP-206ENST00000537582 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
SFSWAP-206ENST00000537582 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
SFSWAP-206ENST00000537582 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
SFSWAP-206ENST00000537582 KRTAP9-7A8MTY7 169 aa5.84□□□□□ -1.48
SFSWAP-206ENST00000537582 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.48
SFSWAP-206ENST00000537582 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
SFSWAP-206ENST00000537582 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
SFSWAP-206ENST00000537582 MUC12Q9UKN1 5478 aa5.78□□□□□ -1.48
SFSWAP-206ENST00000537582 MT1EP04732 61 aa5.76□□□□□ -1.49
SFSWAP-206ENST00000537582 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms