RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 LCA10Q71F78 164 aa11.47□□□□□ -0.57
HMGA2-206ENST00000536545 SVIPQ8NHG7 77 aa11.47□□□□□ -0.57
HMGA2-206ENST00000536545 SEC61BP60468 96 aaKnown RBP11.46□□□□□ -0.58
HMGA2-206ENST00000536545 CDC42SE1Q9NRR8 79 aa11.44□□□□□ -0.58
HMGA2-206ENST00000536545 KRTAP3-3Q9BYR6 98 aa11.43□□□□□ -0.58
HMGA2-206ENST00000536545 S4R3F8 94 aa11.4□□□□□ -0.58
HMGA2-206ENST00000536545 SEC61GP60059 68 aa11.39□□□□□ -0.59
HMGA2-206ENST00000536545 H1FX-AS1Q4G0G2 97 aa11.39□□□□□ -0.59
HMGA2-206ENST00000536545 PCLOQ9Y6V0 5065 aa11.38□□□□□ -0.59
HMGA2-206ENST00000536545 RBM12B-AS1Q9P1G2 102 aa11.36□□□□□ -0.59
HMGA2-206ENST00000536545 MUC17Q685J3 4493 aa11.32□□□□□ -0.6
HMGA2-206ENST00000536545 UQCR11O14957 56 aa11.31□□□□□ -0.6
HMGA2-206ENST00000536545 KRTAP4-1Q9BYQ7 146 aa11.28□□□□□ -0.6
HMGA2-206ENST00000536545 SPATA8Q6RVD6 105 aa11.26□□□□□ -0.61
HMGA2-206ENST00000536545 HERC1Q15751 4861 aa11.25□□□□□ -0.61
HMGA2-206ENST00000536545 MIR22HGQ0VDD5 57 aa11.23□□□□□ -0.61
HMGA2-206ENST00000536545 HMCN2Q8NDA2 5059 aa11.21□□□□□ -0.61
HMGA2-206ENST00000536545 A0A1B0GU33 70 aa11.15□□□□□ -0.62
HMGA2-206ENST00000536545 KRTAP10-6P60371 365 aaPredicted RBP11.12□□□□□ -0.63
HMGA2-206ENST00000536545 KRTAP3-2Q9BYR7 98 aa11.12□□□□□ -0.63
HMGA2-206ENST00000536545 H0YAA0 97 aa11.1□□□□□ -0.63
HMGA2-206ENST00000536545 KRTAP19-2Q3LHN2 52 aa11.07□□□□□ -0.64
HMGA2-206ENST00000536545 CSAG1Q6PB30 78 aa11.07□□□□□ -0.64
HMGA2-206ENST00000536545 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
HMGA2-206ENST00000536545 A6NN06 94 aa11.01□□□□□ -0.65
HMGA2-206ENST00000536545 P0C880 135 aa10.97□□□□□ -0.65
HMGA2-206ENST00000536545 ADM2Q7Z4H4 148 aa10.95□□□□□ -0.66
HMGA2-206ENST00000536545 KRTAP13-4Q3LI77 160 aa10.88□□□□□ -0.67
HMGA2-206ENST00000536545 FLGP20930 4061 aaPredicted RBP10.82□□□□□ -0.68
HMGA2-206ENST00000536545 MUC2Q02817 5179 aa10.82□□□□□ -0.68
HMGA2-206ENST00000536545 KTN1-AS1Q86SY8 53 aa10.73□□□□□ -0.69
HMGA2-206ENST00000536545 A0A0D9SG42 100 aa10.66□□□□□ -0.7
HMGA2-206ENST00000536545 M0QZ58 72 aa10.65□□□□□ -0.7
HMGA2-206ENST00000536545 LCE2CQ5TA81 110 aa10.65□□□□□ -0.71
HMGA2-206ENST00000536545 RNF213Q63HN8 5207 aa10.61□□□□□ -0.71
HMGA2-206ENST00000536545 K7ERS5 55 aa10.6□□□□□ -0.71
HMGA2-206ENST00000536545 UBR4Q5T4S7 5183 aa10.59□□□□□ -0.71
HMGA2-206ENST00000536545 LORP23490 312 aaPredicted RBP10.52□□□□□ -0.73
HMGA2-206ENST00000536545 R4GN34 69 aa10.49□□□□□ -0.73
HMGA2-206ENST00000536545 KRTAP12-1P59990 96 aa10.47□□□□□ -0.73
HMGA2-206ENST00000536545 KRTAP12-2P59991 146 aa10.46□□□□□ -0.74
HMGA2-206ENST00000536545 FAT4Q6V0I7 4981 aa10.41□□□□□ -0.74
HMGA2-206ENST00000536545 PRAC1Q96KF2 57 aa10.39□□□□□ -0.75
HMGA2-206ENST00000536545 MT1HP80294 61 aa10.39□□□□□ -0.75
HMGA2-206ENST00000536545 SPINT4Q6UDR6 99 aa10.36□□□□□ -0.75
HMGA2-206ENST00000536545 LINC01554Q52M75 96 aa10.34□□□□□ -0.75
HMGA2-206ENST00000536545 ROMO1P60602 79 aa10.28□□□□□ -0.76
HMGA2-206ENST00000536545 CRIPTQ9P021 101 aa10.27□□□□□ -0.77
HMGA2-206ENST00000536545 M0R2T5 61 aa10.24□□□□□ -0.77
HMGA2-206ENST00000536545 MT2AP02795 61 aa10.07□□□□□ -0.8
HMGA2-206ENST00000536545 KRTAP9-8Q9BYQ0 159 aa10.06□□□□□ -0.8
HMGA2-206ENST00000536545 KRTAP25-1Q3LHN0 102 aa10.03□□□□□ -0.8
HMGA2-206ENST00000536545 MT1FP04733 61 aa10.03□□□□□ -0.8
HMGA2-206ENST00000536545 SPRR2GQ9BYE4 73 aa10.03□□□□□ -0.8
HMGA2-206ENST00000536545 KRTAP19-1Q8IUB9 90 aa9.98□□□□□ -0.81
HMGA2-206ENST00000536545 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
HMGA2-206ENST00000536545 C10orf95Q9H7T3 257 aa9.88□□□□□ -0.83
HMGA2-206ENST00000536545 CAMK2N1Q7Z7J9 78 aa9.87□□□□□ -0.83
HMGA2-206ENST00000536545 LCE2AQ5TA79 106 aaPredicted RBP9.73□□□□□ -0.85
HMGA2-206ENST00000536545 KRTAP19-8Q3LI54 63 aa9.72□□□□□ -0.85
HMGA2-206ENST00000536545 PLAC4Q8WY50 150 aa9.7□□□□□ -0.86
HMGA2-206ENST00000536545 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
HMGA2-206ENST00000536545 MT1BP07438 61 aa9.58□□□□□ -0.88
HMGA2-206ENST00000536545 TNP1P09430 55 aa9.45□□□□□ -0.9
HMGA2-206ENST00000536545 PP632Q6XCG6 107 aa9.37□□□□□ -0.91
HMGA2-206ENST00000536545 LCE2BO14633 110 aa9.36□□□□□ -0.91
HMGA2-206ENST00000536545 MT1XP80297 61 aa9.35□□□□□ -0.91
HMGA2-206ENST00000536545 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
HMGA2-206ENST00000536545 KRTAP23-1A1A580 65 aa9.28□□□□□ -0.92
HMGA2-206ENST00000536545 PRO2289Q9P1D8 64 aa9.11□□□□□ -0.95
HMGA2-206ENST00000536545 LCE2DQ5TA82 110 aaPredicted RBP9.07□□□□□ -0.96
HMGA2-206ENST00000536545 LCE3AQ5TA76 89 aa9.05□□□□□ -0.96
HMGA2-206ENST00000536545 USH2AO75445 5202 aa9.04□□□□□ -0.96
HMGA2-206ENST00000536545 KRTAP10-7P60409 375 aaPredicted RBP8.99□□□□□ -0.97
HMGA2-206ENST00000536545 KRTAP15-1Q3LI76 137 aa8.99□□□□□ -0.97
HMGA2-206ENST00000536545 KRTAP10-12P60413 245 aa8.96□□□□□ -0.98
HMGA2-206ENST00000536545 KRTAP8-1Q8IUC2 63 aa8.87□□□□□ -0.99
HMGA2-206ENST00000536545 SSPOA2VEC9 5147 aa8.79□□□□□ -1
HMGA2-206ENST00000536545 KRTAP19-6Q3LI70 58 aa8.68□□□□□ -1.02
HMGA2-206ENST00000536545 KRTAP12-3P60328 96 aa8.66□□□□□ -1.02
HMGA2-206ENST00000536545 KRTAP4-8A0A0G2JLE6 195 aa8.53□□□□□ -1.04
HMGA2-206ENST00000536545 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
HMGA2-206ENST00000536545 SPRR5A0A1B0GTR4 108 aa8.52□□□□□ -1.05
HMGA2-206ENST00000536545 KRTAP19-5Q3LI72 72 aa8.51□□□□□ -1.05
HMGA2-206ENST00000536545 KMT2DO14686 5537 aa8.45□□□□□ -1.06
HMGA2-206ENST00000536545 NDUFAF8A1L188 74 aa8.42□□□□□ -1.06
HMGA2-206ENST00000536545 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
HMGA2-206ENST00000536545 KRTAP19-7Q3SYF9 63 aa8.34□□□□□ -1.07
HMGA2-206ENST00000536545 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
HMGA2-206ENST00000536545 FCGBPQ9Y6R7 5405 aaPredicted RBP8.26□□□□□ -1.09
HMGA2-206ENST00000536545 MT1EP04732 61 aa8.16□□□□□ -1.1
HMGA2-206ENST00000536545 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
HMGA2-206ENST00000536545 LCE3CQ5T5A8 94 aa8.11□□□□□ -1.11
HMGA2-206ENST00000536545 MT1LQ93083 61 aa8.05□□□□□ -1.12
HMGA2-206ENST00000536545 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
HMGA2-206ENST00000536545 H3BS24 57 aa7.94□□□□□ -1.14
HMGA2-206ENST00000536545 CRCT1Q9UGL9 99 aa7.89□□□□□ -1.15
HMGA2-206ENST00000536545 KRTAP4-7Q9BYR0 210 aa7.87□□□□□ -1.15
HMGA2-206ENST00000536545 MACF1Q9UPN3 7388 aaKnown RBP7.77□□□□□ -1.17
HMGA2-206ENST00000536545 KRTAP9-6A8MVA2 160 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms