RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 C5orf47Q569G3 176 aa6.61□□□□□ -1.35
RPAIN-205ENST00000536255 CRCT1Q9UGL9 99 aa6.61□□□□□ -1.35
RPAIN-205ENST00000536255 C1orf64Q8NEQ6 169 aa6.6□□□□□ -1.35
RPAIN-205ENST00000536255 LINC00208Q96KT6 92 aa6.58□□□□□ -1.36
RPAIN-205ENST00000536255 H3BPC8 53 aa6.57□□□□□ -1.36
RPAIN-205ENST00000536255 MT2AP02795 61 aa6.57□□□□□ -1.36
RPAIN-205ENST00000536255 SMIM20Q8N5G0 67 aa6.56□□□□□ -1.36
RPAIN-205ENST00000536255 FAM236AA0A1B0GUQ0 79 aa6.55□□□□□ -1.36
RPAIN-205ENST00000536255 FAM236BA0A1B0GV22 79 aa6.55□□□□□ -1.36
RPAIN-205ENST00000536255 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
RPAIN-205ENST00000536255 MT1FP04733 61 aa6.52□□□□□ -1.37
RPAIN-205ENST00000536255 S4R3F8 94 aa6.51□□□□□ -1.37
RPAIN-205ENST00000536255 TRAV7A0A075B6U4 112 aa6.49□□□□□ -1.37
RPAIN-205ENST00000536255 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
RPAIN-205ENST00000536255 USH2AO75445 5202 aa6.48□□□□□ -1.37
RPAIN-205ENST00000536255 KRTAP5-3Q6L8H2 238 aa6.48□□□□□ -1.37
RPAIN-205ENST00000536255 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
RPAIN-205ENST00000536255 A8MUN3 132 aa6.46□□□□□ -1.38
RPAIN-205ENST00000536255 LCA10Q71F78 164 aa6.44□□□□□ -1.38
RPAIN-205ENST00000536255 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
RPAIN-205ENST00000536255 CSAG1Q6PB30 78 aa6.43□□□□□ -1.38
RPAIN-205ENST00000536255 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
RPAIN-205ENST00000536255 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
RPAIN-205ENST00000536255 SSPOA2VEC9 5147 aa6.4□□□□□ -1.38
RPAIN-205ENST00000536255 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
RPAIN-205ENST00000536255 NDUFC1O43677 76 aa6.36□□□□□ -1.39
RPAIN-205ENST00000536255 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
RPAIN-205ENST00000536255 SNURFQ9Y675 71 aa6.32□□□□□ -1.4
RPAIN-205ENST00000536255 C20orf197Q8N268 126 aa6.3□□□□□ -1.4
RPAIN-205ENST00000536255 ACYP2P14621 99 aa6.26□□□□□ -1.41
RPAIN-205ENST00000536255 COX7CP15954 63 aa6.25□□□□□ -1.41
RPAIN-205ENST00000536255 FCGBPQ9Y6R7 5405 aaPredicted RBP6.24□□□□□ -1.41
RPAIN-205ENST00000536255 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
RPAIN-205ENST00000536255 H0YAA0 97 aa6.21□□□□□ -1.42
RPAIN-205ENST00000536255 LCE5AQ5TCM9 118 aa6.21□□□□□ -1.42
RPAIN-205ENST00000536255 ANAPC13Q9BS18 74 aa6.18□□□□□ -1.42
RPAIN-205ENST00000536255 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
RPAIN-205ENST00000536255 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
RPAIN-205ENST00000536255 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.42
RPAIN-205ENST00000536255 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
RPAIN-205ENST00000536255 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
RPAIN-205ENST00000536255 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
RPAIN-205ENST00000536255 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
RPAIN-205ENST00000536255 H7BZZ5 65 aa6.08□□□□□ -1.44
RPAIN-205ENST00000536255 CYSTM1Q9H1C7 97 aa6.04□□□□□ -1.44
RPAIN-205ENST00000536255 Q5VV11 94 aa6.03□□□□□ -1.44
RPAIN-205ENST00000536255 COA5Q86WW8 74 aa6.02□□□□□ -1.45
RPAIN-205ENST00000536255 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
RPAIN-205ENST00000536255 CCDC179H3BU77 68 aa6□□□□□ -1.45
RPAIN-205ENST00000536255 MT1BP07438 61 aa6□□□□□ -1.45
RPAIN-205ENST00000536255 P0C880 135 aa6□□□□□ -1.45
RPAIN-205ENST00000536255 R4GN34 69 aa5.99□□□□□ -1.45
RPAIN-205ENST00000536255 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
RPAIN-205ENST00000536255 M0QZ58 72 aa5.94□□□□□ -1.46
RPAIN-205ENST00000536255 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
RPAIN-205ENST00000536255 A6NN06 94 aa5.9□□□□□ -1.46
RPAIN-205ENST00000536255 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
RPAIN-205ENST00000536255 SEC61GP60059 68 aa5.88□□□□□ -1.47
RPAIN-205ENST00000536255 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
RPAIN-205ENST00000536255 TMEM258P61165 79 aa5.85□□□□□ -1.47
RPAIN-205ENST00000536255 SERP1Q9Y6X1 66 aa5.85□□□□□ -1.47
RPAIN-205ENST00000536255 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
RPAIN-205ENST00000536255 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
RPAIN-205ENST00000536255 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
RPAIN-205ENST00000536255 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
RPAIN-205ENST00000536255 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
RPAIN-205ENST00000536255 A0A1B0GU69 56 aa5.73□□□□□ -1.49
RPAIN-205ENST00000536255 H3BS24 57 aa5.73□□□□□ -1.49
RPAIN-205ENST00000536255 A0A1B0GU33 70 aa5.7□□□□□ -1.5
RPAIN-205ENST00000536255 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
RPAIN-205ENST00000536255 PRR15LQ9BU68 103 aa5.67□□□□□ -1.5
RPAIN-205ENST00000536255 MT1XP80297 61 aa5.66□□□□□ -1.5
RPAIN-205ENST00000536255 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
RPAIN-205ENST00000536255 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
RPAIN-205ENST00000536255 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
RPAIN-205ENST00000536255 A0A0D9SG42 100 aa5.59□□□□□ -1.51
RPAIN-205ENST00000536255 PCP4P48539 62 aa5.59□□□□□ -1.51
RPAIN-205ENST00000536255 SMIM26A0A096LP01 95 aa5.57□□□□□ -1.52
RPAIN-205ENST00000536255 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
RPAIN-205ENST00000536255 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
RPAIN-205ENST00000536255 KMT2DO14686 5537 aa5.55□□□□□ -1.52
RPAIN-205ENST00000536255 NEBP20929 6669 aa5.54□□□□□ -1.52
RPAIN-205ENST00000536255 V9GYY9 64 aa5.52□□□□□ -1.53
RPAIN-205ENST00000536255 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
RPAIN-205ENST00000536255 SPINT4Q6UDR6 99 aa5.51□□□□□ -1.53
RPAIN-205ENST00000536255 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
RPAIN-205ENST00000536255 UQCR11O14957 56 aa5.47□□□□□ -1.53
RPAIN-205ENST00000536255 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
RPAIN-205ENST00000536255 A8MU10 97 aa5.45□□□□□ -1.54
RPAIN-205ENST00000536255 Q1T7F1 81 aa5.44□□□□□ -1.54
RPAIN-205ENST00000536255 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
RPAIN-205ENST00000536255 RPS28P62857 69 aaKnown RBP5.41□□□□□ -1.54
RPAIN-205ENST00000536255 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
RPAIN-205ENST00000536255 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
RPAIN-205ENST00000536255 PSPHP1O15172 72 aa5.38□□□□□ -1.55
RPAIN-205ENST00000536255 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
RPAIN-205ENST00000536255 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
RPAIN-205ENST00000536255 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
RPAIN-205ENST00000536255 SPRR2EP22531 72 aa5.31□□□□□ -1.56
RPAIN-205ENST00000536255 SPRR2BP35325 72 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms