RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 DMAC1Q96GE9 116 aa5.66□□□□□ -1.5
CDCA3-206ENST00000536241 ACYP2P14621 99 aa5.64□□□□□ -1.51
CDCA3-206ENST00000536241 FAT4Q6V0I7 4981 aa5.64□□□□□ -1.51
CDCA3-206ENST00000536241 M0R2T5 61 aa5.61□□□□□ -1.51
CDCA3-206ENST00000536241 S4R3F8 94 aa5.61□□□□□ -1.51
CDCA3-206ENST00000536241 LCE2AQ5TA79 106 aaPredicted RBP5.6□□□□□ -1.51
CDCA3-206ENST00000536241 LCA10Q71F78 164 aa5.6□□□□□ -1.51
CDCA3-206ENST00000536241 FLGP20930 4061 aaPredicted RBP5.57□□□□□ -1.52
CDCA3-206ENST00000536241 TMEM258P61165 79 aa5.55□□□□□ -1.52
CDCA3-206ENST00000536241 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
CDCA3-206ENST00000536241 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
CDCA3-206ENST00000536241 ATP5EP56381 51 aaPredicted RBP5.51□□□□□ -1.53
CDCA3-206ENST00000536241 COA5Q86WW8 74 aa5.51□□□□□ -1.53
CDCA3-206ENST00000536241 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
CDCA3-206ENST00000536241 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.53
CDCA3-206ENST00000536241 SPTSSBQ8NFR3 76 aa5.44□□□□□ -1.54
CDCA3-206ENST00000536241 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
CDCA3-206ENST00000536241 SERP1Q9Y6X1 66 aa5.39□□□□□ -1.55
CDCA3-206ENST00000536241 MT2AP02795 61 aa5.39□□□□□ -1.55
CDCA3-206ENST00000536241 ADM2Q7Z4H4 148 aa5.36□□□□□ -1.55
CDCA3-206ENST00000536241 H0YAA0 97 aa5.35□□□□□ -1.55
CDCA3-206ENST00000536241 MT1FP04733 61 aa5.35□□□□□ -1.55
CDCA3-206ENST00000536241 KRTAP10-10P60014 251 aa5.35□□□□□ -1.55
CDCA3-206ENST00000536241 P0C880 135 aa5.3□□□□□ -1.56
CDCA3-206ENST00000536241 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
CDCA3-206ENST00000536241 SEC61GP60059 68 aa5.26□□□□□ -1.57
CDCA3-206ENST00000536241 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
CDCA3-206ENST00000536241 LINC01558Q9Y6Z2 57 aa5.24□□□□□ -1.57
CDCA3-206ENST00000536241 A0A1B0GU69 56 aa5.23□□□□□ -1.57
CDCA3-206ENST00000536241 SMIM26A0A096LP01 95 aa5.22□□□□□ -1.57
CDCA3-206ENST00000536241 CRIPTQ9P021 101 aa5.2□□□□□ -1.58
CDCA3-206ENST00000536241 Q1T7F1 81 aa5.18□□□□□ -1.58
CDCA3-206ENST00000536241 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
CDCA3-206ENST00000536241 R4GN34 69 aa5.17□□□□□ -1.58
CDCA3-206ENST00000536241 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
CDCA3-206ENST00000536241 SPRR2GQ9BYE4 73 aa5.16□□□□□ -1.58
CDCA3-206ENST00000536241 V9GYY9 64 aa5.16□□□□□ -1.58
CDCA3-206ENST00000536241 A0A1B0GU33 70 aa5.15□□□□□ -1.58
CDCA3-206ENST00000536241 M0QZ58 72 aa5.15□□□□□ -1.58
CDCA3-206ENST00000536241 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
CDCA3-206ENST00000536241 PSPHP1O15172 72 aa5.12□□□□□ -1.59
CDCA3-206ENST00000536241 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
CDCA3-206ENST00000536241 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
CDCA3-206ENST00000536241 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
CDCA3-206ENST00000536241 SPATA8Q6RVD6 105 aa5.1□□□□□ -1.59
CDCA3-206ENST00000536241 KRTAP9-2Q9BYQ4 174 aa5.09□□□□□ -1.59
CDCA3-206ENST00000536241 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
CDCA3-206ENST00000536241 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
CDCA3-206ENST00000536241 Q5VV11 94 aa5.06□□□□□ -1.6
CDCA3-206ENST00000536241 UQCR11O14957 56 aa5.02□□□□□ -1.61
CDCA3-206ENST00000536241 MT1BP07438 61 aa5.02□□□□□ -1.61
CDCA3-206ENST00000536241 A0A0D9SG42 100 aa5.01□□□□□ -1.61
CDCA3-206ENST00000536241 A8MU10 97 aa4.98□□□□□ -1.61
CDCA3-206ENST00000536241 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
CDCA3-206ENST00000536241 A6NED7 52 aa4.95□□□□□ -1.62
CDCA3-206ENST00000536241 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
CDCA3-206ENST00000536241 A6NN06 94 aa4.94□□□□□ -1.62
CDCA3-206ENST00000536241 USH2AO75445 5202 aa4.93□□□□□ -1.62
CDCA3-206ENST00000536241 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
CDCA3-206ENST00000536241 KRTAP12-1P59990 96 aa4.9□□□□□ -1.62
CDCA3-206ENST00000536241 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
CDCA3-206ENST00000536241 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
CDCA3-206ENST00000536241 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
CDCA3-206ENST00000536241 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
CDCA3-206ENST00000536241 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
CDCA3-206ENST00000536241 CDC42SE1Q9NRR8 79 aa4.81□□□□□ -1.64
CDCA3-206ENST00000536241 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
CDCA3-206ENST00000536241 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
CDCA3-206ENST00000536241 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
CDCA3-206ENST00000536241 MT1XP80297 61 aa4.81□□□□□ -1.64
CDCA3-206ENST00000536241 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
CDCA3-206ENST00000536241 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
CDCA3-206ENST00000536241 K7ERS5 55 aa4.75□□□□□ -1.65
CDCA3-206ENST00000536241 BRK1Q8WUW1 75 aa4.73□□□□□ -1.65
CDCA3-206ENST00000536241 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
CDCA3-206ENST00000536241 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
CDCA3-206ENST00000536241 KRTAP10-7P60409 375 aaPredicted RBP4.62□□□□□ -1.67
CDCA3-206ENST00000536241 KRTAP10-12P60413 245 aa4.56□□□□□ -1.68
CDCA3-206ENST00000536241 TNP1P09430 55 aa4.55□□□□□ -1.68
CDCA3-206ENST00000536241 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
CDCA3-206ENST00000536241 ROMO1P60602 79 aa4.53□□□□□ -1.68
CDCA3-206ENST00000536241 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
CDCA3-206ENST00000536241 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
CDCA3-206ENST00000536241 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
CDCA3-206ENST00000536241 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
CDCA3-206ENST00000536241 KRTAP25-1Q3LHN0 102 aa4.47□□□□□ -1.69
CDCA3-206ENST00000536241 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
CDCA3-206ENST00000536241 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
CDCA3-206ENST00000536241 KMT2DO14686 5537 aa4.41□□□□□ -1.7
CDCA3-206ENST00000536241 LCE3AQ5TA76 89 aa4.4□□□□□ -1.71
CDCA3-206ENST00000536241 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
CDCA3-206ENST00000536241 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
CDCA3-206ENST00000536241 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
CDCA3-206ENST00000536241 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
CDCA3-206ENST00000536241 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
CDCA3-206ENST00000536241 SPRR2FQ96RM1 72 aa4.3□□□□□ -1.72
CDCA3-206ENST00000536241 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
CDCA3-206ENST00000536241 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
CDCA3-206ENST00000536241 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
CDCA3-206ENST00000536241 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms