RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 PCP4P48539 62 aa5.25□□□□□ -1.57
TNFRSF1A-208ENST00000536194 CSAG1Q6PB30 78 aa5.25□□□□□ -1.57
TNFRSF1A-208ENST00000536194 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
TNFRSF1A-208ENST00000536194 A8MUN3 132 aa5.22□□□□□ -1.57
TNFRSF1A-208ENST00000536194 SMIM20Q8N5G0 67 aa5.21□□□□□ -1.58
TNFRSF1A-208ENST00000536194 USH2AO75445 5202 aa5.21□□□□□ -1.58
TNFRSF1A-208ENST00000536194 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
TNFRSF1A-208ENST00000536194 DMAC1Q96GE9 116 aa5.17□□□□□ -1.58
TNFRSF1A-208ENST00000536194 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
TNFRSF1A-208ENST00000536194 NDUFC1O43677 76 aa5.16□□□□□ -1.58
TNFRSF1A-208ENST00000536194 SSPOA2VEC9 5147 aa5.14□□□□□ -1.59
TNFRSF1A-208ENST00000536194 SNURFQ9Y675 71 aa5.13□□□□□ -1.59
TNFRSF1A-208ENST00000536194 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
TNFRSF1A-208ENST00000536194 SERP2Q8N6R1 65 aa5.12□□□□□ -1.59
TNFRSF1A-208ENST00000536194 H0YAA0 97 aa5.11□□□□□ -1.59
TNFRSF1A-208ENST00000536194 C20orf197Q8N268 126 aa5.09□□□□□ -1.59
TNFRSF1A-208ENST00000536194 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
TNFRSF1A-208ENST00000536194 KRTAP19-6Q3LI70 58 aa5.07□□□□□ -1.6
TNFRSF1A-208ENST00000536194 MT1BP07438 61 aa5.05□□□□□ -1.6
TNFRSF1A-208ENST00000536194 ADM2Q7Z4H4 148 aa5.05□□□□□ -1.6
TNFRSF1A-208ENST00000536194 ACYP2P14621 99 aa5.04□□□□□ -1.6
TNFRSF1A-208ENST00000536194 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
TNFRSF1A-208ENST00000536194 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
TNFRSF1A-208ENST00000536194 COX7CP15954 63 aa5.01□□□□□ -1.61
TNFRSF1A-208ENST00000536194 SPANXA2-OT1Q8N9U9 137 aa5.01□□□□□ -1.61
TNFRSF1A-208ENST00000536194 FCGBPQ9Y6R7 5405 aaPredicted RBP4.99□□□□□ -1.61
TNFRSF1A-208ENST00000536194 P0C880 135 aa4.99□□□□□ -1.61
TNFRSF1A-208ENST00000536194 Q5VV11 94 aa4.99□□□□□ -1.61
TNFRSF1A-208ENST00000536194 KRTAP3-2Q9BYR7 98 aa4.99□□□□□ -1.61
TNFRSF1A-208ENST00000536194 CYSTM1Q9H1C7 97 aa4.98□□□□□ -1.61
TNFRSF1A-208ENST00000536194 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
TNFRSF1A-208ENST00000536194 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
TNFRSF1A-208ENST00000536194 H7BZZ5 65 aa4.93□□□□□ -1.62
TNFRSF1A-208ENST00000536194 SPTSSBQ8NFR3 76 aa4.91□□□□□ -1.62
TNFRSF1A-208ENST00000536194 ANAPC13Q9BS18 74 aa4.91□□□□□ -1.62
TNFRSF1A-208ENST00000536194 COA5Q86WW8 74 aa4.88□□□□□ -1.63
TNFRSF1A-208ENST00000536194 R4GN34 69 aa4.88□□□□□ -1.63
TNFRSF1A-208ENST00000536194 A6NN06 94 aa4.87□□□□□ -1.63
TNFRSF1A-208ENST00000536194 M0QZ58 72 aa4.87□□□□□ -1.63
TNFRSF1A-208ENST00000536194 KRTAP10-5P60370 271 aa4.87□□□□□ -1.63
TNFRSF1A-208ENST00000536194 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
TNFRSF1A-208ENST00000536194 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
TNFRSF1A-208ENST00000536194 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
TNFRSF1A-208ENST00000536194 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
TNFRSF1A-208ENST00000536194 MT1XP80297 61 aa4.77□□□□□ -1.65
TNFRSF1A-208ENST00000536194 PLAC4Q8WY50 150 aa4.76□□□□□ -1.65
TNFRSF1A-208ENST00000536194 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
TNFRSF1A-208ENST00000536194 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
TNFRSF1A-208ENST00000536194 ATP5EP56381 51 aaPredicted RBP4.68□□□□□ -1.66
TNFRSF1A-208ENST00000536194 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
TNFRSF1A-208ENST00000536194 SERP1Q9Y6X1 66 aa4.67□□□□□ -1.66
TNFRSF1A-208ENST00000536194 SEC61GP60059 68 aa4.66□□□□□ -1.66
TNFRSF1A-208ENST00000536194 TMEM258P61165 79 aa4.63□□□□□ -1.67
TNFRSF1A-208ENST00000536194 SPATA8Q6RVD6 105 aa4.62□□□□□ -1.67
TNFRSF1A-208ENST00000536194 A0A1B0GU33 70 aa4.61□□□□□ -1.67
TNFRSF1A-208ENST00000536194 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
TNFRSF1A-208ENST00000536194 A0A1B0GU69 56 aa4.6□□□□□ -1.67
TNFRSF1A-208ENST00000536194 KRTAP12-2P59991 146 aa4.59□□□□□ -1.67
TNFRSF1A-208ENST00000536194 A0A0D9SG42 100 aa4.57□□□□□ -1.68
TNFRSF1A-208ENST00000536194 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
TNFRSF1A-208ENST00000536194 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
TNFRSF1A-208ENST00000536194 NEBP20929 6669 aa4.55□□□□□ -1.68
TNFRSF1A-208ENST00000536194 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
TNFRSF1A-208ENST00000536194 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
TNFRSF1A-208ENST00000536194 KRTAP12-1P59990 96 aa4.52□□□□□ -1.69
TNFRSF1A-208ENST00000536194 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
TNFRSF1A-208ENST00000536194 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
TNFRSF1A-208ENST00000536194 KMT2DO14686 5537 aa4.52□□□□□ -1.69
TNFRSF1A-208ENST00000536194 CAMK2N1Q7Z7J9 78 aa4.51□□□□□ -1.69
TNFRSF1A-208ENST00000536194 A8MU10 97 aa4.49□□□□□ -1.69
TNFRSF1A-208ENST00000536194 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
TNFRSF1A-208ENST00000536194 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
TNFRSF1A-208ENST00000536194 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
TNFRSF1A-208ENST00000536194 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
TNFRSF1A-208ENST00000536194 SMIM26A0A096LP01 95 aa4.45□□□□□ -1.7
TNFRSF1A-208ENST00000536194 SPRR2FQ96RM1 72 aa4.45□□□□□ -1.7
TNFRSF1A-208ENST00000536194 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
TNFRSF1A-208ENST00000536194 UQCR11O14957 56 aa4.35□□□□□ -1.71
TNFRSF1A-208ENST00000536194 SPRR2EP22531 72 aa4.35□□□□□ -1.71
TNFRSF1A-208ENST00000536194 SPRR2BP35325 72 aa4.35□□□□□ -1.71
TNFRSF1A-208ENST00000536194 SPRR2AP35326 72 aa4.35□□□□□ -1.71
TNFRSF1A-208ENST00000536194 Q1T7F1 81 aa4.34□□□□□ -1.71
TNFRSF1A-208ENST00000536194 LCE1AQ5T7P2 110 aa4.33□□□□□ -1.72
TNFRSF1A-208ENST00000536194 PSPHP1O15172 72 aa4.32□□□□□ -1.72
TNFRSF1A-208ENST00000536194 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
TNFRSF1A-208ENST00000536194 V9GYY9 64 aa4.31□□□□□ -1.72
TNFRSF1A-208ENST00000536194 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
TNFRSF1A-208ENST00000536194 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
TNFRSF1A-208ENST00000536194 KRTAP2-3P0C7H8 128 aa4.27□□□□□ -1.73
TNFRSF1A-208ENST00000536194 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
TNFRSF1A-208ENST00000536194 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
TNFRSF1A-208ENST00000536194 PRO0628Q9UI54 55 aa4.23□□□□□ -1.73
TNFRSF1A-208ENST00000536194 MT1EP04732 61 aa4.2□□□□□ -1.74
TNFRSF1A-208ENST00000536194 TNP1P09430 55 aa4.2□□□□□ -1.74
TNFRSF1A-208ENST00000536194 SPRR2DP22532 72 aa4.19□□□□□ -1.74
TNFRSF1A-208ENST00000536194 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
TNFRSF1A-208ENST00000536194 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
TNFRSF1A-208ENST00000536194 BRK1Q8WUW1 75 aa4.17□□□□□ -1.74
TNFRSF1A-208ENST00000536194 A6NED7 52 aa4.15□□□□□ -1.75
TNFRSF1A-208ENST00000536194 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms