RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 Q8N9L7 120 aa5.29□□□□□ -1.56
CLSTN3-206ENST00000535668 CASC2Q6XLA1 102 aa5.28□□□□□ -1.56
CLSTN3-206ENST00000535668 WFDC13Q8IUB5 93 aa5.27□□□□□ -1.57
CLSTN3-206ENST00000535668 C8orf17Q9NRJ1 99 aa5.26□□□□□ -1.57
CLSTN3-206ENST00000535668 SERP1Q9Y6X1 66 aa5.26□□□□□ -1.57
CLSTN3-206ENST00000535668 hDV103S1A0JD37 113 aa5.25□□□□□ -1.57
CLSTN3-206ENST00000535668 H1FX-AS1Q4G0G2 97 aa5.25□□□□□ -1.57
CLSTN3-206ENST00000535668 NEBP20929 6669 aa5.24□□□□□ -1.57
CLSTN3-206ENST00000535668 MMP24-AS1A0A0U1RRL7 71 aa5.21□□□□□ -1.58
CLSTN3-206ENST00000535668 SPANXA2-OT1Q8N9U9 137 aa5.21□□□□□ -1.58
CLSTN3-206ENST00000535668 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
CLSTN3-206ENST00000535668 TRAV22A0A0B4J277 110 aa5.19□□□□□ -1.58
CLSTN3-206ENST00000535668 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
CLSTN3-206ENST00000535668 CYSTM1Q9H1C7 97 aa5.19□□□□□ -1.58
CLSTN3-206ENST00000535668 CYP4F30PQ9H0H9 118 aa5.18□□□□□ -1.58
CLSTN3-206ENST00000535668 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
CLSTN3-206ENST00000535668 H0Y9P7 68 aa5.16□□□□□ -1.58
CLSTN3-206ENST00000535668 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.59
CLSTN3-206ENST00000535668 C1orf64Q8NEQ6 169 aa5.14□□□□□ -1.59
CLSTN3-206ENST00000535668 LINC00208Q96KT6 92 aa5.14□□□□□ -1.59
CLSTN3-206ENST00000535668 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
CLSTN3-206ENST00000535668 KRTAP19-8Q3LI54 63 aa5.12□□□□□ -1.59
CLSTN3-206ENST00000535668 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
CLSTN3-206ENST00000535668 MT1BP07438 61 aa5.11□□□□□ -1.59
CLSTN3-206ENST00000535668 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
CLSTN3-206ENST00000535668 C7orf65Q6ZTY9 151 aa5.1□□□□□ -1.59
CLSTN3-206ENST00000535668 V9GYY9 64 aa5.09□□□□□ -1.59
CLSTN3-206ENST00000535668 NDUFS5O43920 106 aa5.08□□□□□ -1.6
CLSTN3-206ENST00000535668 Q5W150 140 aa5.08□□□□□ -1.6
CLSTN3-206ENST00000535668 A6NN06 94 aa5.07□□□□□ -1.6
CLSTN3-206ENST00000535668 KMT2DO14686 5537 aa5.05□□□□□ -1.6
CLSTN3-206ENST00000535668 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
CLSTN3-206ENST00000535668 Q5VV11 94 aa5.03□□□□□ -1.6
CLSTN3-206ENST00000535668 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
CLSTN3-206ENST00000535668 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
CLSTN3-206ENST00000535668 KRTAP3-1Q9BYR8 98 aa5.02□□□□□ -1.61
CLSTN3-206ENST00000535668 Q1T7F1 81 aa5.01□□□□□ -1.61
CLSTN3-206ENST00000535668 KRTAP20-1Q3LI63 56 aa5.01□□□□□ -1.61
CLSTN3-206ENST00000535668 C4orf26Q17RF5 130 aa5□□□□□ -1.61
CLSTN3-206ENST00000535668 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
CLSTN3-206ENST00000535668 MDN1Q9NU22 5596 aa4.98□□□□□ -1.61
CLSTN3-206ENST00000535668 ACYP2P14621 99 aa4.97□□□□□ -1.61
CLSTN3-206ENST00000535668 CRIPTQ9P021 101 aa4.95□□□□□ -1.62
CLSTN3-206ENST00000535668 A8MUN3 132 aa4.94□□□□□ -1.62
CLSTN3-206ENST00000535668 LCA10Q71F78 164 aa4.93□□□□□ -1.62
CLSTN3-206ENST00000535668 S4R3F8 94 aa4.93□□□□□ -1.62
CLSTN3-206ENST00000535668 COA5Q86WW8 74 aa4.92□□□□□ -1.62
CLSTN3-206ENST00000535668 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
CLSTN3-206ENST00000535668 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
CLSTN3-206ENST00000535668 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
CLSTN3-206ENST00000535668 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
CLSTN3-206ENST00000535668 SEC61GP60059 68 aa4.87□□□□□ -1.63
CLSTN3-206ENST00000535668 LINC01558Q9Y6Z2 57 aa4.86□□□□□ -1.63
CLSTN3-206ENST00000535668 H0YAA0 97 aa4.85□□□□□ -1.63
CLSTN3-206ENST00000535668 SPTSSBQ8NFR3 76 aa4.85□□□□□ -1.63
CLSTN3-206ENST00000535668 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
CLSTN3-206ENST00000535668 CHKB-CPT1BH3BT56 60 aa4.84□□□□□ -1.63
CLSTN3-206ENST00000535668 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
CLSTN3-206ENST00000535668 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
CLSTN3-206ENST00000535668 PSPHP1O15172 72 aa4.74□□□□□ -1.65
CLSTN3-206ENST00000535668 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
CLSTN3-206ENST00000535668 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
CLSTN3-206ENST00000535668 MT1XP80297 61 aa4.73□□□□□ -1.65
CLSTN3-206ENST00000535668 SPRR2FQ96RM1 72 aa4.73□□□□□ -1.65
CLSTN3-206ENST00000535668 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
CLSTN3-206ENST00000535668 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
CLSTN3-206ENST00000535668 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
CLSTN3-206ENST00000535668 A0A1B0GU69 56 aa4.7□□□□□ -1.66
CLSTN3-206ENST00000535668 SPRR2EP22531 72 aa4.7□□□□□ -1.66
CLSTN3-206ENST00000535668 SPRR2BP35325 72 aa4.7□□□□□ -1.66
CLSTN3-206ENST00000535668 SPRR2AP35326 72 aa4.7□□□□□ -1.66
CLSTN3-206ENST00000535668 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
CLSTN3-206ENST00000535668 A6NED7 52 aa4.69□□□□□ -1.66
CLSTN3-206ENST00000535668 UQCR11O14957 56 aa4.65□□□□□ -1.67
CLSTN3-206ENST00000535668 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.67
CLSTN3-206ENST00000535668 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
CLSTN3-206ENST00000535668 ADM2Q7Z4H4 148 aa4.6□□□□□ -1.67
CLSTN3-206ENST00000535668 PLAC4Q8WY50 150 aa4.6□□□□□ -1.67
CLSTN3-206ENST00000535668 SPRR2DP22532 72 aa4.56□□□□□ -1.68
CLSTN3-206ENST00000535668 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
CLSTN3-206ENST00000535668 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
CLSTN3-206ENST00000535668 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
CLSTN3-206ENST00000535668 KRTAP4-8A0A0G2JLE6 195 aa4.53□□□□□ -1.68
CLSTN3-206ENST00000535668 KRTAP4-8Q9BYQ9 185 aa4.53□□□□□ -1.68
CLSTN3-206ENST00000535668 R4GN34 69 aa4.53□□□□□ -1.68
CLSTN3-206ENST00000535668 A0A1B0GU33 70 aa4.51□□□□□ -1.69
CLSTN3-206ENST00000535668 P0C880 135 aa4.49□□□□□ -1.69
CLSTN3-206ENST00000535668 KRTAP3-2Q9BYR7 98 aa4.49□□□□□ -1.69
CLSTN3-206ENST00000535668 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
CLSTN3-206ENST00000535668 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
CLSTN3-206ENST00000535668 K7ERS5 55 aa4.45□□□□□ -1.7
CLSTN3-206ENST00000535668 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
CLSTN3-206ENST00000535668 M0QZ58 72 aa4.44□□□□□ -1.7
CLSTN3-206ENST00000535668 A8MU10 97 aa4.4□□□□□ -1.71
CLSTN3-206ENST00000535668 H3BS24 57 aa4.38□□□□□ -1.71
CLSTN3-206ENST00000535668 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
CLSTN3-206ENST00000535668 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
CLSTN3-206ENST00000535668 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
CLSTN3-206ENST00000535668 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
CLSTN3-206ENST00000535668 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms