RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 KRTAP9-3Q9BYQ3 159 aa11.32□□□□□ -0.6
SIPA1-210ENST00000534406 DMAC1Q96GE9 116 aa11.31□□□□□ -0.6
SIPA1-210ENST00000534406 NDUFC1O43677 76 aa11.3□□□□□ -0.6
SIPA1-210ENST00000534406 SNURFQ9Y675 71 aa11.29□□□□□ -0.6
SIPA1-210ENST00000534406 C20orf197Q8N268 126 aa11.26□□□□□ -0.61
SIPA1-210ENST00000534406 FSIP2Q5CZC0 6907 aa11.21□□□□□ -0.61
SIPA1-210ENST00000534406 KRTAP9-6A0A140TA67 174 aa11.19□□□□□ -0.62
SIPA1-210ENST00000534406 CRCT1Q9UGL9 99 aa11.18□□□□□ -0.62
SIPA1-210ENST00000534406 LCE2BO14633 110 aa11.16□□□□□ -0.62
SIPA1-210ENST00000534406 USH2AO75445 5202 aa11.15□□□□□ -0.63
SIPA1-210ENST00000534406 COX7CP15954 63 aa11.13□□□□□ -0.63
SIPA1-210ENST00000534406 ACYP2P14621 99 aa11.11□□□□□ -0.63
SIPA1-210ENST00000534406 SPANXA2-OT1Q8N9U9 137 aa11.08□□□□□ -0.64
SIPA1-210ENST00000534406 H0YAA0 97 aa11.06□□□□□ -0.64
SIPA1-210ENST00000534406 ANAPC13Q9BS18 74 aa11.01□□□□□ -0.65
SIPA1-210ENST00000534406 SSPOA2VEC9 5147 aa10.96□□□□□ -0.66
SIPA1-210ENST00000534406 ADM2Q7Z4H4 148 aa10.95□□□□□ -0.66
SIPA1-210ENST00000534406 KRTAP19-1Q8IUB9 90 aa10.95□□□□□ -0.66
SIPA1-210ENST00000534406 CHKB-CPT1BH3BT56 60 aa10.94□□□□□ -0.66
SIPA1-210ENST00000534406 SPTSSBQ8NFR3 76 aa10.92□□□□□ -0.66
SIPA1-210ENST00000534406 CRIPTQ9P021 101 aa10.92□□□□□ -0.66
SIPA1-210ENST00000534406 SPRR2GQ9BYE4 73 aa10.91□□□□□ -0.66
SIPA1-210ENST00000534406 CYSTM1Q9H1C7 97 aa10.88□□□□□ -0.67
SIPA1-210ENST00000534406 H7BZZ5 65 aa10.86□□□□□ -0.67
SIPA1-210ENST00000534406 P0C880 135 aa10.76□□□□□ -0.69
SIPA1-210ENST00000534406 KRTAP19-8Q3LI54 63 aa10.76□□□□□ -0.69
SIPA1-210ENST00000534406 Q5VV11 94 aa10.75□□□□□ -0.69
SIPA1-210ENST00000534406 COA5Q86WW8 74 aa10.75□□□□□ -0.69
SIPA1-210ENST00000534406 CCDC179H3BU77 68 aa10.74□□□□□ -0.69
SIPA1-210ENST00000534406 KRTAP3-2Q9BYR7 98 aa10.73□□□□□ -0.69
SIPA1-210ENST00000534406 KRTAP19-6Q3LI70 58 aa10.71□□□□□ -0.69
SIPA1-210ENST00000534406 MT1BP07438 61 aa10.69□□□□□ -0.7
SIPA1-210ENST00000534406 R4GN34 69 aa10.65□□□□□ -0.7
SIPA1-210ENST00000534406 FCGBPQ9Y6R7 5405 aaPredicted RBP10.65□□□□□ -0.71
SIPA1-210ENST00000534406 M0QZ58 72 aa10.59□□□□□ -0.71
SIPA1-210ENST00000534406 ATP5EP56381 51 aaPredicted RBP10.52□□□□□ -0.73
SIPA1-210ENST00000534406 A6NN06 94 aa10.41□□□□□ -0.74
SIPA1-210ENST00000534406 LINC01554Q52M75 96 aa10.41□□□□□ -0.74
SIPA1-210ENST00000534406 TMEM258P61165 79 aa10.4□□□□□ -0.74
SIPA1-210ENST00000534406 SEC61GP60059 68 aa10.39□□□□□ -0.75
SIPA1-210ENST00000534406 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.38□□□□□ -0.75
SIPA1-210ENST00000534406 KRTAP10-5P60370 271 aa10.36□□□□□ -0.75
SIPA1-210ENST00000534406 PLAC4Q8WY50 150 aa10.36□□□□□ -0.75
SIPA1-210ENST00000534406 SERP1Q9Y6X1 66 aa10.35□□□□□ -0.75
SIPA1-210ENST00000534406 MACF1Q9UPN3 7388 aaKnown RBP10.27□□□□□ -0.77
SIPA1-210ENST00000534406 KRTAP13-4Q3LI77 160 aa10.23□□□□□ -0.77
SIPA1-210ENST00000534406 A0A1B0GU69 56 aa10.19□□□□□ -0.78
SIPA1-210ENST00000534406 PRO2289Q9P1D8 64 aa10.19□□□□□ -0.78
SIPA1-210ENST00000534406 MT1XP80297 61 aa10.15□□□□□ -0.78
SIPA1-210ENST00000534406 A0A1B0GU33 70 aa10.14□□□□□ -0.79
SIPA1-210ENST00000534406 KRTAP9-7A8MTY7 169 aa10.12□□□□□ -0.79
SIPA1-210ENST00000534406 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
SIPA1-210ENST00000534406 PRR15LQ9BU68 103 aa10.05□□□□□ -0.8
SIPA1-210ENST00000534406 LINC01558Q9Y6Z2 57 aa10.02□□□□□ -0.81
SIPA1-210ENST00000534406 A0A0D9SG42 100 aa9.99□□□□□ -0.81
SIPA1-210ENST00000534406 PCP4P48539 62 aa9.95□□□□□ -0.82
SIPA1-210ENST00000534406 SYNE2Q8WXH0 6885 aaKnown RBP9.95□□□□□ -0.82
SIPA1-210ENST00000534406 SMIM26A0A096LP01 95 aa9.88□□□□□ -0.83
SIPA1-210ENST00000534406 CAMK2N1Q7Z7J9 78 aa9.88□□□□□ -0.83
SIPA1-210ENST00000534406 KRTAP6-3Q3LI67 103 aa9.86□□□□□ -0.83
SIPA1-210ENST00000534406 KRTAP12-2P59991 146 aa9.82□□□□□ -0.84
SIPA1-210ENST00000534406 SPINT4Q6UDR6 99 aa9.82□□□□□ -0.84
SIPA1-210ENST00000534406 KRTAP12-1P59990 96 aa9.79□□□□□ -0.84
SIPA1-210ENST00000534406 A8MU10 97 aa9.78□□□□□ -0.84
SIPA1-210ENST00000534406 V9GYY9 64 aa9.75□□□□□ -0.85
SIPA1-210ENST00000534406 UQCR11O14957 56 aa9.7□□□□□ -0.86
SIPA1-210ENST00000534406 KRTAP10-7P60409 375 aaPredicted RBP9.69□□□□□ -0.86
SIPA1-210ENST00000534406 KMT2DO14686 5537 aa9.68□□□□□ -0.86
SIPA1-210ENST00000534406 Q1T7F1 81 aa9.68□□□□□ -0.86
SIPA1-210ENST00000534406 KRTAP10-12P60413 245 aa9.63□□□□□ -0.87
SIPA1-210ENST00000534406 KRTAP5-9P26371 169 aa9.61□□□□□ -0.87
SIPA1-210ENST00000534406 PSPHP1O15172 72 aa9.6□□□□□ -0.87
SIPA1-210ENST00000534406 RPS28P62857 69 aaKnown RBP9.58□□□□□ -0.88
SIPA1-210ENST00000534406 KRTAP8-1Q8IUC2 63 aa9.58□□□□□ -0.88
SIPA1-210ENST00000534406 KRTAP4-8A0A0G2JLE6 195 aa9.52□□□□□ -0.89
SIPA1-210ENST00000534406 MIR22HGQ0VDD5 57 aa9.52□□□□□ -0.89
SIPA1-210ENST00000534406 KRTAP4-8Q9BYQ9 185 aa9.52□□□□□ -0.89
SIPA1-210ENST00000534406 MUC12Q9UKN1 5478 aa9.52□□□□□ -0.89
SIPA1-210ENST00000534406 SPRR2FQ96RM1 72 aa9.46□□□□□ -0.9
SIPA1-210ENST00000534406 NEBP20929 6669 aa9.4□□□□□ -0.91
SIPA1-210ENST00000534406 MDN1Q9NU22 5596 aa9.33□□□□□ -0.92
SIPA1-210ENST00000534406 A6NED7 52 aa9.33□□□□□ -0.92
SIPA1-210ENST00000534406 C10orf95Q9H7T3 257 aa9.31□□□□□ -0.92
SIPA1-210ENST00000534406 K7ERS5 55 aa9.28□□□□□ -0.92
SIPA1-210ENST00000534406 TNP1P09430 55 aa9.22□□□□□ -0.93
SIPA1-210ENST00000534406 SPRR2EP22531 72 aa9.21□□□□□ -0.94
SIPA1-210ENST00000534406 SPRR2BP35325 72 aa9.21□□□□□ -0.94
SIPA1-210ENST00000534406 SPRR2AP35326 72 aa9.21□□□□□ -0.94
SIPA1-210ENST00000534406 LCE1AQ5T7P2 110 aa9.13□□□□□ -0.95
SIPA1-210ENST00000534406 KRTAP19-7Q3SYF9 63 aa9.05□□□□□ -0.96
SIPA1-210ENST00000534406 LCE3AQ5TA76 89 aa9□□□□□ -0.97
SIPA1-210ENST00000534406 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
SIPA1-210ENST00000534406 MT1EP04732 61 aa8.97□□□□□ -0.97
SIPA1-210ENST00000534406 KRTAP19-5Q3LI72 72 aa8.96□□□□□ -0.98
SIPA1-210ENST00000534406 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
SIPA1-210ENST00000534406 KRTAP20-1Q3LI63 56 aa8.93□□□□□ -0.98
SIPA1-210ENST00000534406 SPRR2DP22532 72 aa8.9□□□□□ -0.98
SIPA1-210ENST00000534406 KRTAP2-3P0C7H8 128 aa8.8□□□□□ -1
SIPA1-210ENST00000534406 KRTAP19-3Q7Z4W3 81 aa8.8□□□□□ -1
SIPA1-210ENST00000534406 KRTAP2-4Q9BYR9 128 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms