RNA–Protein interactions for RNA: ENST00000534213.5

GTF2H1-213, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-213ENST00000534213 C5orf47Q569G3 176 aa4.7□□□□□ -1.66
GTF2H1-213ENST00000534213 CYP4F30PQ9H0H9 118 aa4.7□□□□□ -1.66
GTF2H1-213ENST00000534213 MP68P56378 58 aa4.69□□□□□ -1.66
GTF2H1-213ENST00000534213 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
GTF2H1-213ENST00000534213 H3BPC8 53 aa4.68□□□□□ -1.66
GTF2H1-213ENST00000534213 M0R2T5 61 aa4.68□□□□□ -1.66
GTF2H1-213ENST00000534213 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
GTF2H1-213ENST00000534213 FAM236AA0A1B0GUQ0 79 aa4.67□□□□□ -1.66
GTF2H1-213ENST00000534213 FAM236BA0A1B0GV22 79 aa4.67□□□□□ -1.66
GTF2H1-213ENST00000534213 C4orf26Q17RF5 130 aa4.66□□□□□ -1.66
GTF2H1-213ENST00000534213 H1FX-AS1Q4G0G2 97 aa4.66□□□□□ -1.66
GTF2H1-213ENST00000534213 C1orf64Q8NEQ6 169 aa4.66□□□□□ -1.66
GTF2H1-213ENST00000534213 LINC00208Q96KT6 92 aa4.65□□□□□ -1.67
GTF2H1-213ENST00000534213 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
GTF2H1-213ENST00000534213 TRAV7A0A075B6U4 112 aa4.64□□□□□ -1.67
GTF2H1-213ENST00000534213 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
GTF2H1-213ENST00000534213 A8MUN3 132 aa4.57□□□□□ -1.68
GTF2H1-213ENST00000534213 KLKP1Q107X0 134 aa4.57□□□□□ -1.68
GTF2H1-213ENST00000534213 SERP2Q8N6R1 65 aa4.57□□□□□ -1.68
GTF2H1-213ENST00000534213 S4R3F8 94 aa4.54□□□□□ -1.68
GTF2H1-213ENST00000534213 CSAG1Q6PB30 78 aa4.5□□□□□ -1.69
GTF2H1-213ENST00000534213 LCA10Q71F78 164 aa4.5□□□□□ -1.69
GTF2H1-213ENST00000534213 C20orf197Q8N268 126 aa4.49□□□□□ -1.69
GTF2H1-213ENST00000534213 DMAC1Q96GE9 116 aa4.49□□□□□ -1.69
GTF2H1-213ENST00000534213 MT2AP02795 61 aa4.48□□□□□ -1.69
GTF2H1-213ENST00000534213 COX7CP15954 63 aa4.48□□□□□ -1.69
GTF2H1-213ENST00000534213 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
GTF2H1-213ENST00000534213 NDUFC1O43677 76 aa4.46□□□□□ -1.7
GTF2H1-213ENST00000534213 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
GTF2H1-213ENST00000534213 MT1FP04733 61 aa4.44□□□□□ -1.7
GTF2H1-213ENST00000534213 ACYP2P14621 99 aa4.44□□□□□ -1.7
GTF2H1-213ENST00000534213 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
GTF2H1-213ENST00000534213 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
GTF2H1-213ENST00000534213 H0YAA0 97 aa4.39□□□□□ -1.71
GTF2H1-213ENST00000534213 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
GTF2H1-213ENST00000534213 H7BZZ5 65 aa4.36□□□□□ -1.71
GTF2H1-213ENST00000534213 SPTSSBQ8NFR3 76 aa4.36□□□□□ -1.71
GTF2H1-213ENST00000534213 CHKB-CPT1BH3BT56 60 aa4.33□□□□□ -1.72
GTF2H1-213ENST00000534213 CYSTM1Q9H1C7 97 aa4.32□□□□□ -1.72
GTF2H1-213ENST00000534213 CRIPTQ9P021 101 aa4.32□□□□□ -1.72
GTF2H1-213ENST00000534213 KRTAP23-1A1A580 65 aa4.31□□□□□ -1.72
GTF2H1-213ENST00000534213 CCDC179H3BU77 68 aa4.31□□□□□ -1.72
GTF2H1-213ENST00000534213 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
GTF2H1-213ENST00000534213 ADM2Q7Z4H4 148 aa4.29□□□□□ -1.72
GTF2H1-213ENST00000534213 COA5Q86WW8 74 aa4.27□□□□□ -1.73
GTF2H1-213ENST00000534213 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
GTF2H1-213ENST00000534213 ATP5EP56381 51 aaPredicted RBP4.26□□□□□ -1.73
GTF2H1-213ENST00000534213 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
GTF2H1-213ENST00000534213 USH2AO75445 5202 aa4.25□□□□□ -1.73
GTF2H1-213ENST00000534213 P0C880 135 aa4.21□□□□□ -1.74
GTF2H1-213ENST00000534213 TMEM258P61165 79 aa4.21□□□□□ -1.74
GTF2H1-213ENST00000534213 KRTAP19-8Q3LI54 63 aa4.21□□□□□ -1.74
GTF2H1-213ENST00000534213 R4GN34 69 aa4.19□□□□□ -1.74
GTF2H1-213ENST00000534213 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
GTF2H1-213ENST00000534213 Q5VV11 94 aa4.18□□□□□ -1.74
GTF2H1-213ENST00000534213 SEC61GP60059 68 aa4.15□□□□□ -1.75
GTF2H1-213ENST00000534213 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
GTF2H1-213ENST00000534213 M0QZ58 72 aa4.14□□□□□ -1.75
GTF2H1-213ENST00000534213 MT1BP07438 61 aa4.14□□□□□ -1.75
GTF2H1-213ENST00000534213 SERP1Q9Y6X1 66 aa4.13□□□□□ -1.75
GTF2H1-213ENST00000534213 PCP4P48539 62 aa4.08□□□□□ -1.76
GTF2H1-213ENST00000534213 A0A1B0GU69 56 aa4.07□□□□□ -1.76
GTF2H1-213ENST00000534213 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
GTF2H1-213ENST00000534213 A0A1B0GU33 70 aa4.04□□□□□ -1.76
GTF2H1-213ENST00000534213 A6NN06 94 aa4.04□□□□□ -1.76
GTF2H1-213ENST00000534213 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
GTF2H1-213ENST00000534213 PRR15LQ9BU68 103 aa4.04□□□□□ -1.76
GTF2H1-213ENST00000534213 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
GTF2H1-213ENST00000534213 LINC01558Q9Y6Z2 57 aa4.03□□□□□ -1.76
GTF2H1-213ENST00000534213 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
GTF2H1-213ENST00000534213 KRTAP13-4Q3LI77 160 aa4.01□□□□□ -1.77
GTF2H1-213ENST00000534213 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
GTF2H1-213ENST00000534213 V9GYY9 64 aa3.97□□□□□ -1.77
GTF2H1-213ENST00000534213 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
GTF2H1-213ENST00000534213 SPATA8Q6RVD6 105 aa3.95□□□□□ -1.78
GTF2H1-213ENST00000534213 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
GTF2H1-213ENST00000534213 MT1XP80297 61 aa3.94□□□□□ -1.78
GTF2H1-213ENST00000534213 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
GTF2H1-213ENST00000534213 Q1T7F1 81 aa3.93□□□□□ -1.78
GTF2H1-213ENST00000534213 A0A0D9SG42 100 aa3.91□□□□□ -1.78
GTF2H1-213ENST00000534213 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
GTF2H1-213ENST00000534213 UQCR11O14957 56 aa3.9□□□□□ -1.79
GTF2H1-213ENST00000534213 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
GTF2H1-213ENST00000534213 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
GTF2H1-213ENST00000534213 SPINT4Q6UDR6 99 aa3.86□□□□□ -1.79
GTF2H1-213ENST00000534213 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
GTF2H1-213ENST00000534213 A8MU10 97 aa3.84□□□□□ -1.79
GTF2H1-213ENST00000534213 PSPHP1O15172 72 aa3.83□□□□□ -1.8
GTF2H1-213ENST00000534213 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
GTF2H1-213ENST00000534213 MIR22HGQ0VDD5 57 aa3.81□□□□□ -1.8
GTF2H1-213ENST00000534213 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
GTF2H1-213ENST00000534213 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
GTF2H1-213ENST00000534213 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
GTF2H1-213ENST00000534213 A6NED7 52 aa3.74□□□□□ -1.81
GTF2H1-213ENST00000534213 K7ERS5 55 aa3.73□□□□□ -1.81
GTF2H1-213ENST00000534213 KRTAP5-9P26371 169 aa3.72□□□□□ -1.81
GTF2H1-213ENST00000534213 KRTAP5-11Q6L8G4 156 aa3.7□□□□□ -1.82
GTF2H1-213ENST00000534213 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
GTF2H1-213ENST00000534213 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
GTF2H1-213ENST00000534213 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms