RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 A6NN06 94 aa3.86□□□□□ -1.79
RNPC3-209ENST00000533834 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
RNPC3-209ENST00000533834 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
RNPC3-209ENST00000533834 SPINK7P58062 85 aa3.85□□□□□ -1.79
RNPC3-209ENST00000533834 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
RNPC3-209ENST00000533834 PLA2G1BP04054 148 aaKnown RBP3.84□□□□□ -1.79
RNPC3-209ENST00000533834 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
RNPC3-209ENST00000533834 KIAA1109Q2LD37 5005 aa3.82□□□□□ -1.8
RNPC3-209ENST00000533834 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
RNPC3-209ENST00000533834 NDUFS5O43920 106 aa3.82□□□□□ -1.8
RNPC3-209ENST00000533834 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
RNPC3-209ENST00000533834 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
RNPC3-209ENST00000533834 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
RNPC3-209ENST00000533834 CDK2AP2O75956 126 aa3.81□□□□□ -1.8
RNPC3-209ENST00000533834 FLG2Q5D862 2391 aaPredicted RBP3.8□□□□□ -1.8
RNPC3-209ENST00000533834 ACYP2P14621 99 aa3.8□□□□□ -1.8
RNPC3-209ENST00000533834 LINC00304Q8N9R0 145 aa3.79□□□□□ -1.8
RNPC3-209ENST00000533834 LRP2P98164 4655 aa3.78□□□□□ -1.8
RNPC3-209ENST00000533834 SPATA8Q6RVD6 105 aa3.77□□□□□ -1.81
RNPC3-209ENST00000533834 ATP11AUNQ6ZP68 121 aa3.77□□□□□ -1.81
RNPC3-209ENST00000533834 MT1HL1P0DM35 61 aa3.76□□□□□ -1.81
RNPC3-209ENST00000533834 Q8N1X5 172 aa3.76□□□□□ -1.81
RNPC3-209ENST00000533834 CHKB-CPT1BH3BT56 60 aa3.76□□□□□ -1.81
RNPC3-209ENST00000533834 RETNLBQ9BQ08 111 aa3.76□□□□□ -1.81
RNPC3-209ENST00000533834 SMR3BP02814 79 aaPredicted RBP3.75□□□□□ -1.81
RNPC3-209ENST00000533834 C7orf65Q6ZTY9 151 aa3.72□□□□□ -1.81
RNPC3-209ENST00000533834 FLGP20930 4061 aaPredicted RBP3.71□□□□□ -1.81
RNPC3-209ENST00000533834 H0YAA0 97 aa3.69□□□□□ -1.82
RNPC3-209ENST00000533834 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
RNPC3-209ENST00000533834 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
RNPC3-209ENST00000533834 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
RNPC3-209ENST00000533834 A6NED7 52 aa3.68□□□□□ -1.82
RNPC3-209ENST00000533834 KRTAP10-6P60371 365 aaPredicted RBP3.67□□□□□ -1.82
RNPC3-209ENST00000533834 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
RNPC3-209ENST00000533834 HERC2O95714 4834 aa3.66□□□□□ -1.82
RNPC3-209ENST00000533834 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.83
RNPC3-209ENST00000533834 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.83
RNPC3-209ENST00000533834 A0A1B0GU69 56 aa3.63□□□□□ -1.83
RNPC3-209ENST00000533834 COX6B2Q6YFQ2 88 aa3.63□□□□□ -1.83
RNPC3-209ENST00000533834 Q5VSD8 79 aa3.62□□□□□ -1.83
RNPC3-209ENST00000533834 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
RNPC3-209ENST00000533834 ADM2Q7Z4H4 148 aa3.6□□□□□ -1.83
RNPC3-209ENST00000533834 MIR22HGQ0VDD5 57 aa3.59□□□□□ -1.83
RNPC3-209ENST00000533834 UQCR11O14957 56 aa3.58□□□□□ -1.84
RNPC3-209ENST00000533834 RBM12B-AS1Q9P1G2 102 aa3.58□□□□□ -1.84
RNPC3-209ENST00000533834 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
RNPC3-209ENST00000533834 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
RNPC3-209ENST00000533834 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
RNPC3-209ENST00000533834 PCLOQ9Y6V0 5065 aa3.54□□□□□ -1.84
RNPC3-209ENST00000533834 TPRXLQ17RH7 258 aa3.54□□□□□ -1.84
RNPC3-209ENST00000533834 SEC61GP60059 68 aa3.53□□□□□ -1.84
RNPC3-209ENST00000533834 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
RNPC3-209ENST00000533834 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
RNPC3-209ENST00000533834 MUC2Q02817 5179 aa3.51□□□□□ -1.85
RNPC3-209ENST00000533834 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
RNPC3-209ENST00000533834 A0A1B0GU33 70 aa3.49□□□□□ -1.85
RNPC3-209ENST00000533834 HERC1Q15751 4861 aa3.49□□□□□ -1.85
RNPC3-209ENST00000533834 P0C880 135 aa3.48□□□□□ -1.85
RNPC3-209ENST00000533834 S4R3F8 94 aa3.43□□□□□ -1.86
RNPC3-209ENST00000533834 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
RNPC3-209ENST00000533834 KRTAP12-1P59990 96 aa3.41□□□□□ -1.86
RNPC3-209ENST00000533834 CSAG1Q6PB30 78 aa3.4□□□□□ -1.86
RNPC3-209ENST00000533834 KRTAP25-1Q3LHN0 102 aa3.38□□□□□ -1.87
RNPC3-209ENST00000533834 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
RNPC3-209ENST00000533834 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
RNPC3-209ENST00000533834 ROMO1P60602 79 aa3.3□□□□□ -1.88
RNPC3-209ENST00000533834 DMBT1Q9UGM3 2413 aaPredicted RBP3.29□□□□□ -1.88
RNPC3-209ENST00000533834 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
RNPC3-209ENST00000533834 M0QZ58 72 aa3.28□□□□□ -1.88
RNPC3-209ENST00000533834 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
RNPC3-209ENST00000533834 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
RNPC3-209ENST00000533834 A0A0D9SG42 100 aa3.22□□□□□ -1.89
RNPC3-209ENST00000533834 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
RNPC3-209ENST00000533834 KRTAP15-1Q3LI76 137 aa3.21□□□□□ -1.9
RNPC3-209ENST00000533834 CRIPTQ9P021 101 aa3.21□□□□□ -1.9
RNPC3-209ENST00000533834 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.9
RNPC3-209ENST00000533834 SPRR2GQ9BYE4 73 aa3.15□□□□□ -1.91
RNPC3-209ENST00000533834 MT1HP80294 61 aa3.13□□□□□ -1.91
RNPC3-209ENST00000533834 K7ERS5 55 aa3.12□□□□□ -1.91
RNPC3-209ENST00000533834 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
RNPC3-209ENST00000533834 R4GN34 69 aa3.08□□□□□ -1.92
RNPC3-209ENST00000533834 MT1FP04733 61 aa3.07□□□□□ -1.92
RNPC3-209ENST00000533834 MT2AP02795 61 aa3.06□□□□□ -1.92
RNPC3-209ENST00000533834 KRTAP19-8Q3LI54 63 aa3.05□□□□□ -1.92
RNPC3-209ENST00000533834 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
RNPC3-209ENST00000533834 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
RNPC3-209ENST00000533834 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.93
RNPC3-209ENST00000533834 MT1BP07438 61 aa3.01□□□□□ -1.93
RNPC3-209ENST00000533834 H3BS24 57 aa3□□□□□ -1.93
RNPC3-209ENST00000533834 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
RNPC3-209ENST00000533834 MT1XP80297 61 aa2.96□□□□□ -1.94
RNPC3-209ENST00000533834 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
RNPC3-209ENST00000533834 PP632Q6XCG6 107 aa2.93□□□□□ -1.94
RNPC3-209ENST00000533834 PLAC4Q8WY50 150 aa2.88□□□□□ -1.95
RNPC3-209ENST00000533834 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
RNPC3-209ENST00000533834 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
RNPC3-209ENST00000533834 NDUFAF8A1L188 74 aa2.84□□□□□ -1.96
RNPC3-209ENST00000533834 USH2AO75445 5202 aa2.83□□□□□ -1.96
RNPC3-209ENST00000533834 SSPOA2VEC9 5147 aa2.82□□□□□ -1.96
RNPC3-209ENST00000533834 TNP1P09430 55 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms