RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 NDUFC1O43677 76 aa5.73□□□□□ -1.49
COMMD9-208ENST00000533643 H7BZZ5 65 aa5.72□□□□□ -1.49
COMMD9-208ENST00000533643 KRTAP3-3Q9BYR6 98 aa5.72□□□□□ -1.49
COMMD9-208ENST00000533643 ACYP2P14621 99 aa5.69□□□□□ -1.5
COMMD9-208ENST00000533643 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
COMMD9-208ENST00000533643 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
COMMD9-208ENST00000533643 MT2AP02795 61 aa5.63□□□□□ -1.51
COMMD9-208ENST00000533643 MT1FP04733 61 aa5.59□□□□□ -1.51
COMMD9-208ENST00000533643 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
COMMD9-208ENST00000533643 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
COMMD9-208ENST00000533643 COA5Q86WW8 74 aa5.57□□□□□ -1.52
COMMD9-208ENST00000533643 PCP4P48539 62 aa5.54□□□□□ -1.52
COMMD9-208ENST00000533643 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
COMMD9-208ENST00000533643 TMEM258P61165 79 aa5.54□□□□□ -1.52
COMMD9-208ENST00000533643 SPTSSBQ8NFR3 76 aa5.54□□□□□ -1.52
COMMD9-208ENST00000533643 H0YAA0 97 aa5.52□□□□□ -1.53
COMMD9-208ENST00000533643 KRTAP9-3Q9BYQ3 159 aa5.5□□□□□ -1.53
COMMD9-208ENST00000533643 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
COMMD9-208ENST00000533643 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
COMMD9-208ENST00000533643 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
COMMD9-208ENST00000533643 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
COMMD9-208ENST00000533643 P0C880 135 aa5.42□□□□□ -1.54
COMMD9-208ENST00000533643 LCE2BO14633 110 aa5.39□□□□□ -1.55
COMMD9-208ENST00000533643 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
COMMD9-208ENST00000533643 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
COMMD9-208ENST00000533643 SERP1Q9Y6X1 66 aa5.38□□□□□ -1.55
COMMD9-208ENST00000533643 SPRR2GQ9BYE4 73 aa5.36□□□□□ -1.55
COMMD9-208ENST00000533643 USH2AO75445 5202 aa5.35□□□□□ -1.55
COMMD9-208ENST00000533643 SEC61GP60059 68 aa5.31□□□□□ -1.56
COMMD9-208ENST00000533643 R4GN34 69 aa5.29□□□□□ -1.56
COMMD9-208ENST00000533643 M0QZ58 72 aa5.27□□□□□ -1.57
COMMD9-208ENST00000533643 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
COMMD9-208ENST00000533643 LINC01558Q9Y6Z2 57 aa5.26□□□□□ -1.57
COMMD9-208ENST00000533643 A0A1B0GU69 56 aa5.25□□□□□ -1.57
COMMD9-208ENST00000533643 MT1BP07438 61 aa5.23□□□□□ -1.57
COMMD9-208ENST00000533643 RPS28P62857 69 aaKnown RBP5.23□□□□□ -1.57
COMMD9-208ENST00000533643 Q5VV11 94 aa5.23□□□□□ -1.57
COMMD9-208ENST00000533643 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
COMMD9-208ENST00000533643 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
COMMD9-208ENST00000533643 A0A1B0GU33 70 aa5.21□□□□□ -1.58
COMMD9-208ENST00000533643 PRR15LQ9BU68 103 aa5.2□□□□□ -1.58
COMMD9-208ENST00000533643 CRCT1Q9UGL9 99 aa5.2□□□□□ -1.58
COMMD9-208ENST00000533643 SMIM26A0A096LP01 95 aa5.19□□□□□ -1.58
COMMD9-208ENST00000533643 LINC01554Q52M75 96 aa5.18□□□□□ -1.58
COMMD9-208ENST00000533643 Q1T7F1 81 aa5.17□□□□□ -1.58
COMMD9-208ENST00000533643 FSIP2Q5CZC0 6907 aa5.16□□□□□ -1.58
COMMD9-208ENST00000533643 V9GYY9 64 aa5.15□□□□□ -1.59
COMMD9-208ENST00000533643 SPATA8Q6RVD6 105 aa5.14□□□□□ -1.59
COMMD9-208ENST00000533643 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
COMMD9-208ENST00000533643 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
COMMD9-208ENST00000533643 PLAC4Q8WY50 150 aa5.1□□□□□ -1.59
COMMD9-208ENST00000533643 A6NN06 94 aa5.09□□□□□ -1.59
COMMD9-208ENST00000533643 PSPHP1O15172 72 aa5.09□□□□□ -1.59
COMMD9-208ENST00000533643 A0A0D9SG42 100 aa5.08□□□□□ -1.6
COMMD9-208ENST00000533643 A8MU10 97 aa5.04□□□□□ -1.6
COMMD9-208ENST00000533643 UQCR11O14957 56 aa5.04□□□□□ -1.6
COMMD9-208ENST00000533643 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
COMMD9-208ENST00000533643 KRTAP10-5P60370 271 aa5.03□□□□□ -1.6
COMMD9-208ENST00000533643 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
COMMD9-208ENST00000533643 MT1XP80297 61 aa4.99□□□□□ -1.61
COMMD9-208ENST00000533643 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
COMMD9-208ENST00000533643 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
COMMD9-208ENST00000533643 KRTAP12-2P59991 146 aa4.96□□□□□ -1.62
COMMD9-208ENST00000533643 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
COMMD9-208ENST00000533643 A6NED7 52 aa4.93□□□□□ -1.62
COMMD9-208ENST00000533643 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
COMMD9-208ENST00000533643 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.82□□□□□ -1.64
COMMD9-208ENST00000533643 CDC42SE1Q9NRR8 79 aa4.8□□□□□ -1.64
COMMD9-208ENST00000533643 K7ERS5 55 aa4.78□□□□□ -1.64
COMMD9-208ENST00000533643 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
COMMD9-208ENST00000533643 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
COMMD9-208ENST00000533643 KRTAP10-12P60413 245 aa4.73□□□□□ -1.65
COMMD9-208ENST00000533643 MACF1Q9UPN3 7388 aaKnown RBP4.73□□□□□ -1.65
COMMD9-208ENST00000533643 KMT2DO14686 5537 aa4.67□□□□□ -1.66
COMMD9-208ENST00000533643 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
COMMD9-208ENST00000533643 KRTAP4-8Q9BYQ9 185 aa4.66□□□□□ -1.66
COMMD9-208ENST00000533643 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
COMMD9-208ENST00000533643 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
COMMD9-208ENST00000533643 TNP1P09430 55 aa4.63□□□□□ -1.67
COMMD9-208ENST00000533643 KRTAP6-3Q3LI67 103 aa4.63□□□□□ -1.67
COMMD9-208ENST00000533643 KRTAP8-1Q8IUC2 63 aa4.61□□□□□ -1.67
COMMD9-208ENST00000533643 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
COMMD9-208ENST00000533643 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
COMMD9-208ENST00000533643 ROMO1P60602 79 aa4.55□□□□□ -1.68
COMMD9-208ENST00000533643 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
COMMD9-208ENST00000533643 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
COMMD9-208ENST00000533643 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
COMMD9-208ENST00000533643 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
COMMD9-208ENST00000533643 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
COMMD9-208ENST00000533643 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
COMMD9-208ENST00000533643 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
COMMD9-208ENST00000533643 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
COMMD9-208ENST00000533643 MT1EP04732 61 aa4.4□□□□□ -1.71
COMMD9-208ENST00000533643 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
COMMD9-208ENST00000533643 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
COMMD9-208ENST00000533643 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
COMMD9-208ENST00000533643 SPRR2EP22531 72 aa4.36□□□□□ -1.71
COMMD9-208ENST00000533643 SPRR2BP35325 72 aa4.36□□□□□ -1.71
COMMD9-208ENST00000533643 SPRR2AP35326 72 aa4.36□□□□□ -1.71
COMMD9-208ENST00000533643 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms