RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 H1FX-AS1Q4G0G2 97 aa11.01□□□□□ -0.65
AP004608.1-202ENST00000533390 S4R3F8 94 aa11□□□□□ -0.65
AP004608.1-202ENST00000533390 SEC61GP60059 68 aa10.98□□□□□ -0.65
AP004608.1-202ENST00000533390 A6NED7 52 aa10.98□□□□□ -0.65
AP004608.1-202ENST00000533390 LCA10Q71F78 164 aa10.97□□□□□ -0.65
AP004608.1-202ENST00000533390 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
AP004608.1-202ENST00000533390 KRTAP4-1Q9BYQ7 146 aa10.89□□□□□ -0.67
AP004608.1-202ENST00000533390 MUC17Q685J3 4493 aa10.87□□□□□ -0.67
AP004608.1-202ENST00000533390 PRO0628Q9UI54 55 aa10.85□□□□□ -0.67
AP004608.1-202ENST00000533390 HERC1Q15751 4861 aa10.81□□□□□ -0.68
AP004608.1-202ENST00000533390 CDC42SE1Q9NRR8 79 aa10.79□□□□□ -0.68
AP004608.1-202ENST00000533390 UQCR11O14957 56 aa10.78□□□□□ -0.68
AP004608.1-202ENST00000533390 HMCN2Q8NDA2 5059 aa10.76□□□□□ -0.69
AP004608.1-202ENST00000533390 A8MU10 97 aa10.72□□□□□ -0.69
AP004608.1-202ENST00000533390 CSAG1Q6PB30 78 aa10.72□□□□□ -0.69
AP004608.1-202ENST00000533390 MIR22HGQ0VDD5 57 aa10.68□□□□□ -0.7
AP004608.1-202ENST00000533390 A0A1B0GU33 70 aa10.66□□□□□ -0.7
AP004608.1-202ENST00000533390 SPATA8Q6RVD6 105 aa10.66□□□□□ -0.7
AP004608.1-202ENST00000533390 KRTAP19-2Q3LHN2 52 aa10.61□□□□□ -0.71
AP004608.1-202ENST00000533390 KRTAP10-6P60371 365 aaPredicted RBP10.58□□□□□ -0.72
AP004608.1-202ENST00000533390 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
AP004608.1-202ENST00000533390 ADM2Q7Z4H4 148 aa10.53□□□□□ -0.72
AP004608.1-202ENST00000533390 H0YAA0 97 aa10.5□□□□□ -0.73
AP004608.1-202ENST00000533390 P0C880 135 aa10.48□□□□□ -0.73
AP004608.1-202ENST00000533390 PMAIP1Q13794 54 aa10.42□□□□□ -0.74
AP004608.1-202ENST00000533390 MUC2Q02817 5179 aa10.4□□□□□ -0.74
AP004608.1-202ENST00000533390 SVIPQ8NHG7 77 aa10.4□□□□□ -0.75
AP004608.1-202ENST00000533390 KRTAP13-4Q3LI77 160 aa10.33□□□□□ -0.76
AP004608.1-202ENST00000533390 A6NN06 94 aa10.28□□□□□ -0.76
AP004608.1-202ENST00000533390 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
AP004608.1-202ENST00000533390 FLGP20930 4061 aaPredicted RBP10.28□□□□□ -0.76
AP004608.1-202ENST00000533390 M0QZ58 72 aa10.25□□□□□ -0.77
AP004608.1-202ENST00000533390 A0A0D9SG42 100 aa10.21□□□□□ -0.77
AP004608.1-202ENST00000533390 K7ERS5 55 aa10.2□□□□□ -0.78
AP004608.1-202ENST00000533390 UBR4Q5T4S7 5183 aa10.19□□□□□ -0.78
AP004608.1-202ENST00000533390 RNF213Q63HN8 5207 aa10.19□□□□□ -0.78
AP004608.1-202ENST00000533390 R4GN34 69 aa10.17□□□□□ -0.78
AP004608.1-202ENST00000533390 M0R2T5 61 aa10.1□□□□□ -0.79
AP004608.1-202ENST00000533390 MT1HP80294 61 aa10.1□□□□□ -0.79
AP004608.1-202ENST00000533390 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
AP004608.1-202ENST00000533390 KTN1-AS1Q86SY8 53 aa10.04□□□□□ -0.8
AP004608.1-202ENST00000533390 LINC01554Q52M75 96 aa10□□□□□ -0.81
AP004608.1-202ENST00000533390 FAT4Q6V0I7 4981 aa10□□□□□ -0.81
AP004608.1-202ENST00000533390 SPINT4Q6UDR6 99 aa9.98□□□□□ -0.81
AP004608.1-202ENST00000533390 KRTAP12-1P59990 96 aa9.96□□□□□ -0.81
AP004608.1-202ENST00000533390 CRIPTQ9P021 101 aa9.96□□□□□ -0.81
AP004608.1-202ENST00000533390 KRTAP12-2P59991 146 aa9.95□□□□□ -0.82
AP004608.1-202ENST00000533390 ROMO1P60602 79 aa9.76□□□□□ -0.85
AP004608.1-202ENST00000533390 MT2AP02795 61 aa9.74□□□□□ -0.85
AP004608.1-202ENST00000533390 KRTAP9-8Q9BYQ0 159 aa9.74□□□□□ -0.85
AP004608.1-202ENST00000533390 KRTAP10-10P60014 251 aa9.72□□□□□ -0.85
AP004608.1-202ENST00000533390 PRAC1Q96KF2 57 aa9.72□□□□□ -0.85
AP004608.1-202ENST00000533390 MT1FP04733 61 aa9.7□□□□□ -0.86
AP004608.1-202ENST00000533390 SPRR2GQ9BYE4 73 aa9.67□□□□□ -0.86
AP004608.1-202ENST00000533390 KRTAP19-1Q8IUB9 90 aa9.6□□□□□ -0.87
AP004608.1-202ENST00000533390 CAMK2N1Q7Z7J9 78 aa9.56□□□□□ -0.88
AP004608.1-202ENST00000533390 LCE2AQ5TA79 106 aaPredicted RBP9.51□□□□□ -0.89
AP004608.1-202ENST00000533390 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
AP004608.1-202ENST00000533390 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
AP004608.1-202ENST00000533390 C10orf95Q9H7T3 257 aa9.41□□□□□ -0.9
AP004608.1-202ENST00000533390 KRTAP9-3Q9BYQ3 159 aa9.38□□□□□ -0.91
AP004608.1-202ENST00000533390 KRTAP19-8Q3LI54 63 aa9.37□□□□□ -0.91
AP004608.1-202ENST00000533390 MT1BP07438 61 aa9.23□□□□□ -0.93
AP004608.1-202ENST00000533390 TNP1P09430 55 aa9.13□□□□□ -0.95
AP004608.1-202ENST00000533390 LCE2BO14633 110 aa9.08□□□□□ -0.96
AP004608.1-202ENST00000533390 MT1XP80297 61 aa8.98□□□□□ -0.97
AP004608.1-202ENST00000533390 KRTAP10-5P60370 271 aa8.97□□□□□ -0.97
AP004608.1-202ENST00000533390 PP632Q6XCG6 107 aa8.97□□□□□ -0.97
AP004608.1-202ENST00000533390 PRO2289Q9P1D8 64 aa8.92□□□□□ -0.98
AP004608.1-202ENST00000533390 KRTAP23-1A1A580 65 aa8.87□□□□□ -0.99
AP004608.1-202ENST00000533390 USH2AO75445 5202 aa8.68□□□□□ -1.02
AP004608.1-202ENST00000533390 LCE3AQ5TA76 89 aa8.66□□□□□ -1.02
AP004608.1-202ENST00000533390 KRTAP10-7P60409 375 aaPredicted RBP8.65□□□□□ -1.02
AP004608.1-202ENST00000533390 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
AP004608.1-202ENST00000533390 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
AP004608.1-202ENST00000533390 KRTAP9-2Q9BYQ4 174 aa8.5□□□□□ -1.05
AP004608.1-202ENST00000533390 KRTAP19-6Q3LI70 58 aa8.48□□□□□ -1.05
AP004608.1-202ENST00000533390 KRTAP8-1Q8IUC2 63 aa8.48□□□□□ -1.05
AP004608.1-202ENST00000533390 SSPOA2VEC9 5147 aa8.42□□□□□ -1.06
AP004608.1-202ENST00000533390 KRTAP15-1Q3LI76 137 aa8.38□□□□□ -1.07
AP004608.1-202ENST00000533390 KRTAP12-3P60328 96 aa8.32□□□□□ -1.08
AP004608.1-202ENST00000533390 FSIP2Q5CZC0 6907 aa8.27□□□□□ -1.09
AP004608.1-202ENST00000533390 KRTAP4-8A0A0G2JLE6 195 aa8.26□□□□□ -1.09
AP004608.1-202ENST00000533390 KRTAP4-8Q9BYQ9 185 aa8.26□□□□□ -1.09
AP004608.1-202ENST00000533390 KRTAP19-5Q3LI72 72 aa8.19□□□□□ -1.1
AP004608.1-202ENST00000533390 KMT2DO14686 5537 aa8.1□□□□□ -1.11
AP004608.1-202ENST00000533390 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.12
AP004608.1-202ENST00000533390 KRTAP9-6A0A140TA67 174 aa8.03□□□□□ -1.12
AP004608.1-202ENST00000533390 KRTAP19-7Q3SYF9 63 aa8□□□□□ -1.13
AP004608.1-202ENST00000533390 SPRR5A0A1B0GTR4 108 aa7.98□□□□□ -1.13
AP004608.1-202ENST00000533390 FCGBPQ9Y6R7 5405 aaPredicted RBP7.97□□□□□ -1.13
AP004608.1-202ENST00000533390 LUZP6Q538Z0 58 aa7.92□□□□□ -1.14
AP004608.1-202ENST00000533390 NDUFAF8A1L188 74 aa7.86□□□□□ -1.15
AP004608.1-202ENST00000533390 MT1EP04732 61 aa7.85□□□□□ -1.15
AP004608.1-202ENST00000533390 LCE3CQ5T5A8 94 aa7.78□□□□□ -1.16
AP004608.1-202ENST00000533390 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
AP004608.1-202ENST00000533390 MT1LQ93083 61 aa7.74□□□□□ -1.17
AP004608.1-202ENST00000533390 SPRR2FQ96RM1 72 aa7.6□□□□□ -1.19
AP004608.1-202ENST00000533390 MACF1Q9UPN3 7388 aaKnown RBP7.55□□□□□ -1.2
AP004608.1-202ENST00000533390 KRTAP4-7Q9BYR0 210 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms