RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CRCT1Q9UGL9 99 aa5.61□□□□□ -1.51
SSBP3-214ENST00000533209 A8MUN3 132 aa5.59□□□□□ -1.51
SSBP3-214ENST00000533209 LCE2BO14633 110 aa5.59□□□□□ -1.51
SSBP3-214ENST00000533209 USH2AO75445 5202 aa5.56□□□□□ -1.52
SSBP3-214ENST00000533209 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
SSBP3-214ENST00000533209 NDUFC1O43677 76 aa5.52□□□□□ -1.53
SSBP3-214ENST00000533209 DMAC1Q96GE9 116 aa5.52□□□□□ -1.53
SSBP3-214ENST00000533209 SERP2Q8N6R1 65 aa5.51□□□□□ -1.53
SSBP3-214ENST00000533209 SSPOA2VEC9 5147 aa5.49□□□□□ -1.53
SSBP3-214ENST00000533209 SNURFQ9Y675 71 aa5.49□□□□□ -1.53
SSBP3-214ENST00000533209 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
SSBP3-214ENST00000533209 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
SSBP3-214ENST00000533209 H0YAA0 97 aa5.44□□□□□ -1.54
SSBP3-214ENST00000533209 ACYP2P14621 99 aa5.41□□□□□ -1.54
SSBP3-214ENST00000533209 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
SSBP3-214ENST00000533209 COX7CP15954 63 aa5.39□□□□□ -1.55
SSBP3-214ENST00000533209 SPANXA2-OT1Q8N9U9 137 aa5.38□□□□□ -1.55
SSBP3-214ENST00000533209 ADM2Q7Z4H4 148 aa5.37□□□□□ -1.55
SSBP3-214ENST00000533209 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
SSBP3-214ENST00000533209 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
SSBP3-214ENST00000533209 KRTAP19-6Q3LI70 58 aa5.35□□□□□ -1.55
SSBP3-214ENST00000533209 MT1BP07438 61 aa5.33□□□□□ -1.56
SSBP3-214ENST00000533209 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
SSBP3-214ENST00000533209 KRTAP3-2Q9BYR7 98 aa5.31□□□□□ -1.56
SSBP3-214ENST00000533209 CHKB-CPT1BH3BT56 60 aa5.3□□□□□ -1.56
SSBP3-214ENST00000533209 P0C880 135 aa5.3□□□□□ -1.56
SSBP3-214ENST00000533209 Q5VV11 94 aa5.3□□□□□ -1.56
SSBP3-214ENST00000533209 SPTSSBQ8NFR3 76 aa5.3□□□□□ -1.56
SSBP3-214ENST00000533209 ANAPC13Q9BS18 74 aa5.3□□□□□ -1.56
SSBP3-214ENST00000533209 CYSTM1Q9H1C7 97 aa5.3□□□□□ -1.56
SSBP3-214ENST00000533209 H7BZZ5 65 aa5.27□□□□□ -1.57
SSBP3-214ENST00000533209 COA5Q86WW8 74 aa5.23□□□□□ -1.57
SSBP3-214ENST00000533209 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
SSBP3-214ENST00000533209 R4GN34 69 aa5.21□□□□□ -1.58
SSBP3-214ENST00000533209 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
SSBP3-214ENST00000533209 M0QZ58 72 aa5.19□□□□□ -1.58
SSBP3-214ENST00000533209 A6NN06 94 aa5.15□□□□□ -1.59
SSBP3-214ENST00000533209 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
SSBP3-214ENST00000533209 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
SSBP3-214ENST00000533209 PLAC4Q8WY50 150 aa5.09□□□□□ -1.59
SSBP3-214ENST00000533209 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
SSBP3-214ENST00000533209 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
SSBP3-214ENST00000533209 MT1XP80297 61 aa5.04□□□□□ -1.6
SSBP3-214ENST00000533209 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
SSBP3-214ENST00000533209 SEC61GP60059 68 aa5.02□□□□□ -1.61
SSBP3-214ENST00000533209 SERP1Q9Y6X1 66 aa5.02□□□□□ -1.61
SSBP3-214ENST00000533209 TMEM258P61165 79 aa5□□□□□ -1.61
SSBP3-214ENST00000533209 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
SSBP3-214ENST00000533209 MACF1Q9UPN3 7388 aaKnown RBP4.99□□□□□ -1.61
SSBP3-214ENST00000533209 A0A1B0GU33 70 aa4.95□□□□□ -1.62
SSBP3-214ENST00000533209 A0A1B0GU69 56 aa4.94□□□□□ -1.62
SSBP3-214ENST00000533209 KRTAP6-3Q3LI67 103 aa4.94□□□□□ -1.62
SSBP3-214ENST00000533209 SPATA8Q6RVD6 105 aa4.92□□□□□ -1.62
SSBP3-214ENST00000533209 A0A0D9SG42 100 aa4.88□□□□□ -1.63
SSBP3-214ENST00000533209 LINC01558Q9Y6Z2 57 aa4.87□□□□□ -1.63
SSBP3-214ENST00000533209 KRTAP12-2P59991 146 aa4.86□□□□□ -1.63
SSBP3-214ENST00000533209 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
SSBP3-214ENST00000533209 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
SSBP3-214ENST00000533209 CAMK2N1Q7Z7J9 78 aa4.82□□□□□ -1.64
SSBP3-214ENST00000533209 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
SSBP3-214ENST00000533209 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
SSBP3-214ENST00000533209 KRTAP10-7P60409 375 aaPredicted RBP4.81□□□□□ -1.64
SSBP3-214ENST00000533209 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
SSBP3-214ENST00000533209 A8MU10 97 aa4.79□□□□□ -1.64
SSBP3-214ENST00000533209 KRTAP10-12P60413 245 aa4.79□□□□□ -1.64
SSBP3-214ENST00000533209 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
SSBP3-214ENST00000533209 KMT2DO14686 5537 aa4.77□□□□□ -1.65
SSBP3-214ENST00000533209 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
SSBP3-214ENST00000533209 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
SSBP3-214ENST00000533209 PCP4P48539 62 aa4.75□□□□□ -1.65
SSBP3-214ENST00000533209 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
SSBP3-214ENST00000533209 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
SSBP3-214ENST00000533209 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
SSBP3-214ENST00000533209 UQCR11O14957 56 aa4.69□□□□□ -1.66
SSBP3-214ENST00000533209 Q1T7F1 81 aa4.68□□□□□ -1.66
SSBP3-214ENST00000533209 V9GYY9 64 aa4.68□□□□□ -1.66
SSBP3-214ENST00000533209 PSPHP1O15172 72 aa4.64□□□□□ -1.67
SSBP3-214ENST00000533209 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
SSBP3-214ENST00000533209 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
SSBP3-214ENST00000533209 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
SSBP3-214ENST00000533209 SPRR2EP22531 72 aa4.58□□□□□ -1.68
SSBP3-214ENST00000533209 SPRR2BP35325 72 aa4.58□□□□□ -1.68
SSBP3-214ENST00000533209 SPRR2AP35326 72 aa4.58□□□□□ -1.68
SSBP3-214ENST00000533209 C10orf95Q9H7T3 257 aa4.58□□□□□ -1.68
SSBP3-214ENST00000533209 NEBP20929 6669 aa4.58□□□□□ -1.68
SSBP3-214ENST00000533209 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
SSBP3-214ENST00000533209 TNP1P09430 55 aa4.5□□□□□ -1.69
SSBP3-214ENST00000533209 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
SSBP3-214ENST00000533209 A6NED7 52 aa4.48□□□□□ -1.69
SSBP3-214ENST00000533209 KRTAP20-1Q3LI63 56 aa4.47□□□□□ -1.69
SSBP3-214ENST00000533209 K7ERS5 55 aa4.46□□□□□ -1.7
SSBP3-214ENST00000533209 MT1EP04732 61 aa4.45□□□□□ -1.7
SSBP3-214ENST00000533209 KRTAP19-5Q3LI72 72 aa4.44□□□□□ -1.7
SSBP3-214ENST00000533209 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
SSBP3-214ENST00000533209 SPRR2DP22532 72 aa4.43□□□□□ -1.7
SSBP3-214ENST00000533209 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
SSBP3-214ENST00000533209 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
SSBP3-214ENST00000533209 KRTAP25-1Q3LHN0 102 aa4.36□□□□□ -1.71
SSBP3-214ENST00000533209 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
SSBP3-214ENST00000533209 LCE5AQ5TCM9 118 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms