RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 TRAV22A0A0B4J277 110 aa5.84□□□□□ -1.47
TRAPPC4-213ENST00000533149 MP68P56378 58 aa5.83□□□□□ -1.48
TRAPPC4-213ENST00000533149 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
TRAPPC4-213ENST00000533149 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
TRAPPC4-213ENST00000533149 C20orf197Q8N268 126 aa5.8□□□□□ -1.48
TRAPPC4-213ENST00000533149 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
TRAPPC4-213ENST00000533149 H3BPC8 53 aa5.79□□□□□ -1.48
TRAPPC4-213ENST00000533149 CCDC179H3BU77 68 aa5.79□□□□□ -1.48
TRAPPC4-213ENST00000533149 PCP4P48539 62 aa5.79□□□□□ -1.48
TRAPPC4-213ENST00000533149 C1orf64Q8NEQ6 169 aa5.79□□□□□ -1.48
TRAPPC4-213ENST00000533149 KRTAP4-2Q9BYR5 136 aa5.79□□□□□ -1.48
TRAPPC4-213ENST00000533149 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
TRAPPC4-213ENST00000533149 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
TRAPPC4-213ENST00000533149 LOC101927531A0A1B0GV80 90 aa5.76□□□□□ -1.49
TRAPPC4-213ENST00000533149 IGKV2D-30A0A075B6S6 120 aa5.75□□□□□ -1.49
TRAPPC4-213ENST00000533149 MT2AP02795 61 aa5.75□□□□□ -1.49
TRAPPC4-213ENST00000533149 CYP4F30PQ9H0H9 118 aa5.75□□□□□ -1.49
TRAPPC4-213ENST00000533149 SPINK7P58062 85 aa5.74□□□□□ -1.49
TRAPPC4-213ENST00000533149 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
TRAPPC4-213ENST00000533149 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
TRAPPC4-213ENST00000533149 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
TRAPPC4-213ENST00000533149 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
TRAPPC4-213ENST00000533149 MT1FP04733 61 aa5.71□□□□□ -1.5
TRAPPC4-213ENST00000533149 KRTAP19-4Q3LI73 84 aa5.71□□□□□ -1.5
TRAPPC4-213ENST00000533149 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
TRAPPC4-213ENST00000533149 KRTAP10-10P60014 251 aa5.7□□□□□ -1.5
TRAPPC4-213ENST00000533149 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
TRAPPC4-213ENST00000533149 NDUFC1O43677 76 aa5.67□□□□□ -1.5
TRAPPC4-213ENST00000533149 H7BZZ5 65 aa5.65□□□□□ -1.51
TRAPPC4-213ENST00000533149 HRES1P13985 223 aa5.65□□□□□ -1.51
TRAPPC4-213ENST00000533149 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.51
TRAPPC4-213ENST00000533149 C4orf26Q17RF5 130 aa5.62□□□□□ -1.51
TRAPPC4-213ENST00000533149 NEBP20929 6669 aa5.61□□□□□ -1.51
TRAPPC4-213ENST00000533149 SPANXA2-OT1Q8N9U9 137 aa5.59□□□□□ -1.51
TRAPPC4-213ENST00000533149 MPLKIPQ8TAP9 179 aa5.58□□□□□ -1.52
TRAPPC4-213ENST00000533149 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
TRAPPC4-213ENST00000533149 FAM236DA0A1B0GTK5 79 aa5.55□□□□□ -1.52
TRAPPC4-213ENST00000533149 FAM236CP0DP71 79 aa5.55□□□□□ -1.52
TRAPPC4-213ENST00000533149 TMEM258P61165 79 aa5.55□□□□□ -1.52
TRAPPC4-213ENST00000533149 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
TRAPPC4-213ENST00000533149 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
TRAPPC4-213ENST00000533149 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
TRAPPC4-213ENST00000533149 A8MUN3 132 aa5.5□□□□□ -1.53
TRAPPC4-213ENST00000533149 ACYP2P14621 99 aa5.5□□□□□ -1.53
TRAPPC4-213ENST00000533149 ATP5EP56381 51 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC4-213ENST00000533149 H1FX-AS1Q4G0G2 97 aa5.48□□□□□ -1.53
TRAPPC4-213ENST00000533149 COA5Q86WW8 74 aa5.43□□□□□ -1.54
TRAPPC4-213ENST00000533149 MUC12Q9UKN1 5478 aa5.42□□□□□ -1.54
TRAPPC4-213ENST00000533149 CHKB-CPT1BH3BT56 60 aa5.4□□□□□ -1.55
TRAPPC4-213ENST00000533149 SERP1Q9Y6X1 66 aa5.4□□□□□ -1.55
TRAPPC4-213ENST00000533149 S4R3F8 94 aa5.4□□□□□ -1.55
TRAPPC4-213ENST00000533149 LCA10Q71F78 164 aa5.37□□□□□ -1.55
TRAPPC4-213ENST00000533149 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
TRAPPC4-213ENST00000533149 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
TRAPPC4-213ENST00000533149 RPS28P62857 69 aaKnown RBP5.34□□□□□ -1.55
TRAPPC4-213ENST00000533149 KRTAP5-9P26371 169 aa5.32□□□□□ -1.56
TRAPPC4-213ENST00000533149 SPTSSBQ8NFR3 76 aa5.32□□□□□ -1.56
TRAPPC4-213ENST00000533149 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
TRAPPC4-213ENST00000533149 A6NN06 94 aa5.28□□□□□ -1.56
TRAPPC4-213ENST00000533149 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
TRAPPC4-213ENST00000533149 SMIM26A0A096LP01 95 aa5.25□□□□□ -1.57
TRAPPC4-213ENST00000533149 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
TRAPPC4-213ENST00000533149 KMT2DO14686 5537 aa5.21□□□□□ -1.58
TRAPPC4-213ENST00000533149 LINC01558Q9Y6Z2 57 aa5.19□□□□□ -1.58
TRAPPC4-213ENST00000533149 Q1T7F1 81 aa5.17□□□□□ -1.58
TRAPPC4-213ENST00000533149 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
TRAPPC4-213ENST00000533149 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
TRAPPC4-213ENST00000533149 V9GYY9 64 aa5.16□□□□□ -1.58
TRAPPC4-213ENST00000533149 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
TRAPPC4-213ENST00000533149 SEC61GP60059 68 aa5.15□□□□□ -1.59
TRAPPC4-213ENST00000533149 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.59
TRAPPC4-213ENST00000533149 A0A1B0GU69 56 aa5.14□□□□□ -1.59
TRAPPC4-213ENST00000533149 H0YAA0 97 aa5.14□□□□□ -1.59
TRAPPC4-213ENST00000533149 P0C880 135 aa5.11□□□□□ -1.59
TRAPPC4-213ENST00000533149 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
TRAPPC4-213ENST00000533149 PRR15LQ9BU68 103 aa5.11□□□□□ -1.59
TRAPPC4-213ENST00000533149 Q5VV11 94 aa5.1□□□□□ -1.59
TRAPPC4-213ENST00000533149 MT1BP07438 61 aa5.09□□□□□ -1.59
TRAPPC4-213ENST00000533149 SPRR2EP22531 72 aa5.09□□□□□ -1.59
TRAPPC4-213ENST00000533149 SPRR2BP35325 72 aa5.09□□□□□ -1.59
TRAPPC4-213ENST00000533149 SPRR2AP35326 72 aa5.09□□□□□ -1.59
TRAPPC4-213ENST00000533149 PSPHP1O15172 72 aa5.08□□□□□ -1.6
TRAPPC4-213ENST00000533149 A0A1B0GU33 70 aa5.03□□□□□ -1.6
TRAPPC4-213ENST00000533149 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
TRAPPC4-213ENST00000533149 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
TRAPPC4-213ENST00000533149 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
TRAPPC4-213ENST00000533149 SPRR2GQ9BYE4 73 aa4.97□□□□□ -1.61
TRAPPC4-213ENST00000533149 M0QZ58 72 aa4.96□□□□□ -1.62
TRAPPC4-213ENST00000533149 UQCR11O14957 56 aa4.96□□□□□ -1.62
TRAPPC4-213ENST00000533149 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
TRAPPC4-213ENST00000533149 R4GN34 69 aa4.96□□□□□ -1.62
TRAPPC4-213ENST00000533149 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
TRAPPC4-213ENST00000533149 SPRR2DP22532 72 aa4.94□□□□□ -1.62
TRAPPC4-213ENST00000533149 LCE1AQ5T7P2 110 aa4.94□□□□□ -1.62
TRAPPC4-213ENST00000533149 A6NED7 52 aa4.93□□□□□ -1.62
TRAPPC4-213ENST00000533149 MIR22HGQ0VDD5 57 aa4.9□□□□□ -1.63
TRAPPC4-213ENST00000533149 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
TRAPPC4-213ENST00000533149 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
TRAPPC4-213ENST00000533149 A0A0D9SG42 100 aa4.87□□□□□ -1.63
TRAPPC4-213ENST00000533149 A8MU10 97 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms