RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 MT-ATP8P03928 68 aa8.23□□□□□ -1.09
SMG1-203ENST00000532700 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
SMG1-203ENST00000532700 S4R3F8 94 aa8.21□□□□□ -1.1
SMG1-203ENST00000532700 H3BPC8 53 aa8.18□□□□□ -1.1
SMG1-203ENST00000532700 MACF1Q9UPN3 7388 aaKnown RBP8.17□□□□□ -1.1
SMG1-203ENST00000532700 CSAG1Q6PB30 78 aa8.13□□□□□ -1.11
SMG1-203ENST00000532700 LCA10Q71F78 164 aa8.13□□□□□ -1.11
SMG1-203ENST00000532700 SMIM20Q8N5G0 67 aa8.13□□□□□ -1.11
SMG1-203ENST00000532700 KLKP1Q107X0 134 aa8.12□□□□□ -1.11
SMG1-203ENST00000532700 FAM236AA0A1B0GUQ0 79 aa8.11□□□□□ -1.11
SMG1-203ENST00000532700 FAM236BA0A1B0GV22 79 aa8.11□□□□□ -1.11
SMG1-203ENST00000532700 SYNE2Q8WXH0 6885 aaKnown RBP8.1□□□□□ -1.11
SMG1-203ENST00000532700 A8MUN3 132 aa8.09□□□□□ -1.11
SMG1-203ENST00000532700 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
SMG1-203ENST00000532700 MT1BP07438 61 aa8.07□□□□□ -1.12
SMG1-203ENST00000532700 NDUFC1O43677 76 aa7.99□□□□□ -1.13
SMG1-203ENST00000532700 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
SMG1-203ENST00000532700 KRTAP19-8Q3LI54 63 aa7.97□□□□□ -1.13
SMG1-203ENST00000532700 KRTAP6-3Q3LI67 103 aa7.96□□□□□ -1.14
SMG1-203ENST00000532700 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
SMG1-203ENST00000532700 Q5VV11 94 aa7.91□□□□□ -1.14
SMG1-203ENST00000532700 SERP2Q8N6R1 65 aa7.9□□□□□ -1.14
SMG1-203ENST00000532700 A6NN06 94 aa7.87□□□□□ -1.15
SMG1-203ENST00000532700 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
SMG1-203ENST00000532700 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
SMG1-203ENST00000532700 H0YAA0 97 aa7.83□□□□□ -1.16
SMG1-203ENST00000532700 ACYP2P14621 99 aa7.82□□□□□ -1.16
SMG1-203ENST00000532700 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
SMG1-203ENST00000532700 CRIPTQ9P021 101 aa7.79□□□□□ -1.16
SMG1-203ENST00000532700 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
SMG1-203ENST00000532700 SPANXA2-OT1Q8N9U9 137 aa7.74□□□□□ -1.17
SMG1-203ENST00000532700 COX7CP15954 63 aa7.72□□□□□ -1.17
SMG1-203ENST00000532700 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.18
SMG1-203ENST00000532700 CHKB-CPT1BH3BT56 60 aa7.69□□□□□ -1.18
SMG1-203ENST00000532700 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
SMG1-203ENST00000532700 NEBP20929 6669 aa7.63□□□□□ -1.19
SMG1-203ENST00000532700 KRTAP5-9P26371 169 aa7.6□□□□□ -1.19
SMG1-203ENST00000532700 ANAPC13Q9BS18 74 aa7.6□□□□□ -1.19
SMG1-203ENST00000532700 P0C880 135 aa7.57□□□□□ -1.2
SMG1-203ENST00000532700 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
SMG1-203ENST00000532700 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
SMG1-203ENST00000532700 R4GN34 69 aa7.55□□□□□ -1.2
SMG1-203ENST00000532700 MT1XP80297 61 aa7.54□□□□□ -1.2
SMG1-203ENST00000532700 H7BZZ5 65 aa7.52□□□□□ -1.21
SMG1-203ENST00000532700 COA5Q86WW8 74 aa7.49□□□□□ -1.21
SMG1-203ENST00000532700 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
SMG1-203ENST00000532700 KMT2DO14686 5537 aa7.49□□□□□ -1.21
SMG1-203ENST00000532700 M0QZ58 72 aa7.48□□□□□ -1.21
SMG1-203ENST00000532700 MDN1Q9NU22 5596 aa7.41□□□□□ -1.22
SMG1-203ENST00000532700 KRTAP20-1Q3LI63 56 aa7.41□□□□□ -1.22
SMG1-203ENST00000532700 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
SMG1-203ENST00000532700 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
SMG1-203ENST00000532700 LINC01554Q52M75 96 aa7.36□□□□□ -1.23
SMG1-203ENST00000532700 SPRR2FQ96RM1 72 aa7.34□□□□□ -1.23
SMG1-203ENST00000532700 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
SMG1-203ENST00000532700 SEC61GP60059 68 aa7.33□□□□□ -1.24
SMG1-203ENST00000532700 SERP1Q9Y6X1 66 aa7.3□□□□□ -1.24
SMG1-203ENST00000532700 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
SMG1-203ENST00000532700 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
SMG1-203ENST00000532700 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
SMG1-203ENST00000532700 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
SMG1-203ENST00000532700 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
SMG1-203ENST00000532700 SPRR2EP22531 72 aa7.25□□□□□ -1.25
SMG1-203ENST00000532700 SPRR2BP35325 72 aa7.25□□□□□ -1.25
SMG1-203ENST00000532700 SPRR2AP35326 72 aa7.25□□□□□ -1.25
SMG1-203ENST00000532700 KRTAP10-7P60409 375 aaPredicted RBP7.21□□□□□ -1.26
SMG1-203ENST00000532700 LCE1AQ5T7P2 110 aa7.19□□□□□ -1.26
SMG1-203ENST00000532700 TMEM258P61165 79 aa7.18□□□□□ -1.26
SMG1-203ENST00000532700 KRTAP2-3P0C7H8 128 aa7.17□□□□□ -1.26
SMG1-203ENST00000532700 KRTAP2-4Q9BYR9 128 aa7.17□□□□□ -1.26
SMG1-203ENST00000532700 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
SMG1-203ENST00000532700 A0A1B0GU33 70 aa7.13□□□□□ -1.27
SMG1-203ENST00000532700 A0A1B0GU69 56 aa7.13□□□□□ -1.27
SMG1-203ENST00000532700 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
SMG1-203ENST00000532700 SPATA8Q6RVD6 105 aa7.05□□□□□ -1.28
SMG1-203ENST00000532700 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
SMG1-203ENST00000532700 A0A0D9SG42 100 aa7.02□□□□□ -1.29
SMG1-203ENST00000532700 SPRR2DP22532 72 aa7□□□□□ -1.29
SMG1-203ENST00000532700 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
SMG1-203ENST00000532700 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
SMG1-203ENST00000532700 SMIM26A0A096LP01 95 aa6.96□□□□□ -1.3
SMG1-203ENST00000532700 KRTAP2-2Q9BYT5 123 aa6.93□□□□□ -1.3
SMG1-203ENST00000532700 KRTAP2-1Q9BYU5 128 aa6.93□□□□□ -1.3
SMG1-203ENST00000532700 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
SMG1-203ENST00000532700 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
SMG1-203ENST00000532700 A8MU10 97 aa6.83□□□□□ -1.32
SMG1-203ENST00000532700 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
SMG1-203ENST00000532700 V9GYY9 64 aa6.79□□□□□ -1.32
SMG1-203ENST00000532700 UQCR11O14957 56 aa6.78□□□□□ -1.32
SMG1-203ENST00000532700 PCP4P48539 62 aa6.77□□□□□ -1.33
SMG1-203ENST00000532700 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
SMG1-203ENST00000532700 Q1T7F1 81 aa6.71□□□□□ -1.34
SMG1-203ENST00000532700 MT1EP04732 61 aa6.66□□□□□ -1.34
SMG1-203ENST00000532700 PSPHP1O15172 72 aa6.65□□□□□ -1.34
SMG1-203ENST00000532700 MIR22HGQ0VDD5 57 aa6.64□□□□□ -1.35
SMG1-203ENST00000532700 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
SMG1-203ENST00000532700 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
SMG1-203ENST00000532700 KRTAP4-12Q9BQ66 201 aa6.59□□□□□ -1.35
SMG1-203ENST00000532700 KRTAP19-3Q7Z4W3 81 aa6.58□□□□□ -1.36
SMG1-203ENST00000532700 GPR98Q8WXG9 6306 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms