RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 Q1T7F1 81 aa10.93□□□□□ -0.66
PACSIN3-209ENST00000532457 H1FX-AS1Q4G0G2 97 aa10.9□□□□□ -0.66
PACSIN3-209ENST00000532457 LCE2CQ5TA81 110 aa10.87□□□□□ -0.67
PACSIN3-209ENST00000532457 V9GYY9 64 aa10.87□□□□□ -0.67
PACSIN3-209ENST00000532457 CHKB-CPT1BH3BT56 60 aa10.81□□□□□ -0.68
PACSIN3-209ENST00000532457 LCA10Q71F78 164 aa10.79□□□□□ -0.68
PACSIN3-209ENST00000532457 KRTAP3-3Q9BYR6 98 aa10.79□□□□□ -0.68
PACSIN3-209ENST00000532457 LCE2AQ5TA79 106 aaPredicted RBP10.77□□□□□ -0.69
PACSIN3-209ENST00000532457 FLGP20930 4061 aaPredicted RBP10.76□□□□□ -0.69
PACSIN3-209ENST00000532457 S4R3F8 94 aa10.76□□□□□ -0.69
PACSIN3-209ENST00000532457 MT1HP80294 61 aa10.73□□□□□ -0.69
PACSIN3-209ENST00000532457 PSPHP1O15172 72 aa10.72□□□□□ -0.69
PACSIN3-209ENST00000532457 LINC01558Q9Y6Z2 57 aa10.72□□□□□ -0.69
PACSIN3-209ENST00000532457 M0R2T5 61 aa10.66□□□□□ -0.7
PACSIN3-209ENST00000532457 PRR15LQ9BU68 103 aa10.66□□□□□ -0.7
PACSIN3-209ENST00000532457 Q5VV11 94 aa10.63□□□□□ -0.71
PACSIN3-209ENST00000532457 SPTSSBQ8NFR3 76 aa10.55□□□□□ -0.72
PACSIN3-209ENST00000532457 CSAG1Q6PB30 78 aa10.54□□□□□ -0.72
PACSIN3-209ENST00000532457 BRK1Q8WUW1 75 aa10.47□□□□□ -0.73
PACSIN3-209ENST00000532457 A0A1B0GU69 56 aa10.46□□□□□ -0.74
PACSIN3-209ENST00000532457 KRTAP10-6P60371 365 aaPredicted RBP10.44□□□□□ -0.74
PACSIN3-209ENST00000532457 LORP23490 312 aaPredicted RBP10.4□□□□□ -0.74
PACSIN3-209ENST00000532457 A6NED7 52 aa10.38□□□□□ -0.75
PACSIN3-209ENST00000532457 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
PACSIN3-209ENST00000532457 PRO0628Q9UI54 55 aa10.37□□□□□ -0.75
PACSIN3-209ENST00000532457 SEC61GP60059 68 aa10.31□□□□□ -0.76
PACSIN3-209ENST00000532457 ADM2Q7Z4H4 148 aa10.3□□□□□ -0.76
PACSIN3-209ENST00000532457 P0C880 135 aa10.28□□□□□ -0.76
PACSIN3-209ENST00000532457 H0YAA0 97 aa10.27□□□□□ -0.77
PACSIN3-209ENST00000532457 SVIPQ8NHG7 77 aa10.26□□□□□ -0.77
PACSIN3-209ENST00000532457 CDC42SE1Q9NRR8 79 aa10.26□□□□□ -0.77
PACSIN3-209ENST00000532457 KRTAP9-8Q9BYQ0 159 aa10.23□□□□□ -0.77
PACSIN3-209ENST00000532457 A8MU10 97 aa10.23□□□□□ -0.77
PACSIN3-209ENST00000532457 UQCR11O14957 56 aa10.19□□□□□ -0.78
PACSIN3-209ENST00000532457 MT2AP02795 61 aa10.14□□□□□ -0.79
PACSIN3-209ENST00000532457 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
PACSIN3-209ENST00000532457 MIR22HGQ0VDD5 57 aa10.1□□□□□ -0.79
PACSIN3-209ENST00000532457 KRTAP10-10P60014 251 aa10.1□□□□□ -0.79
PACSIN3-209ENST00000532457 A0A1B0GU33 70 aa10.09□□□□□ -0.79
PACSIN3-209ENST00000532457 MT1FP04733 61 aa10.07□□□□□ -0.8
PACSIN3-209ENST00000532457 LCE2DQ5TA82 110 aaPredicted RBP10.05□□□□□ -0.8
PACSIN3-209ENST00000532457 KRTAP13-4Q3LI77 160 aa10.04□□□□□ -0.8
PACSIN3-209ENST00000532457 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
PACSIN3-209ENST00000532457 M0QZ58 72 aa9.9□□□□□ -0.82
PACSIN3-209ENST00000532457 PMAIP1Q13794 54 aa9.9□□□□□ -0.82
PACSIN3-209ENST00000532457 R4GN34 69 aa9.89□□□□□ -0.83
PACSIN3-209ENST00000532457 KRTAP9-3Q9BYQ3 159 aa9.89□□□□□ -0.83
PACSIN3-209ENST00000532457 CRIPTQ9P021 101 aa9.85□□□□□ -0.83
PACSIN3-209ENST00000532457 KRTAP19-1Q8IUB9 90 aa9.84□□□□□ -0.83
PACSIN3-209ENST00000532457 A6NN06 94 aa9.82□□□□□ -0.84
PACSIN3-209ENST00000532457 SPRR2GQ9BYE4 73 aa9.79□□□□□ -0.84
PACSIN3-209ENST00000532457 A0A0D9SG42 100 aa9.77□□□□□ -0.84
PACSIN3-209ENST00000532457 LINC01554Q52M75 96 aa9.75□□□□□ -0.85
PACSIN3-209ENST00000532457 FSIP2Q5CZC0 6907 aa9.74□□□□□ -0.85
PACSIN3-209ENST00000532457 LCE2BO14633 110 aa9.7□□□□□ -0.86
PACSIN3-209ENST00000532457 USH2AO75445 5202 aa9.65□□□□□ -0.86
PACSIN3-209ENST00000532457 KRTAP12-1P59990 96 aa9.59□□□□□ -0.87
PACSIN3-209ENST00000532457 KRTAP12-2P59991 146 aa9.59□□□□□ -0.88
PACSIN3-209ENST00000532457 K7ERS5 55 aa9.58□□□□□ -0.88
PACSIN3-209ENST00000532457 KTN1-AS1Q86SY8 53 aa9.57□□□□□ -0.88
PACSIN3-209ENST00000532457 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
PACSIN3-209ENST00000532457 CRCT1Q9UGL9 99 aa9.55□□□□□ -0.88
PACSIN3-209ENST00000532457 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
PACSIN3-209ENST00000532457 MT1BP07438 61 aa9.49□□□□□ -0.89
PACSIN3-209ENST00000532457 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
PACSIN3-209ENST00000532457 KRTAP9-6A0A140TA67 174 aa9.46□□□□□ -0.9
PACSIN3-209ENST00000532457 PLAC4Q8WY50 150 aa9.36□□□□□ -0.91
PACSIN3-209ENST00000532457 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
PACSIN3-209ENST00000532457 PRAC1Q96KF2 57 aa9.26□□□□□ -0.93
PACSIN3-209ENST00000532457 ROMO1P60602 79 aa9.24□□□□□ -0.93
PACSIN3-209ENST00000532457 CAMK2N1Q7Z7J9 78 aa9.24□□□□□ -0.93
PACSIN3-209ENST00000532457 FCGBPQ9Y6R7 5405 aaPredicted RBP9.17□□□□□ -0.94
PACSIN3-209ENST00000532457 MT1XP80297 61 aa9.15□□□□□ -0.95
PACSIN3-209ENST00000532457 KRTAP10-5P60370 271 aa9.13□□□□□ -0.95
PACSIN3-209ENST00000532457 C10orf95Q9H7T3 257 aa9.12□□□□□ -0.95
PACSIN3-209ENST00000532457 PRO2289Q9P1D8 64 aa9.05□□□□□ -0.96
PACSIN3-209ENST00000532457 KRTAP25-1Q3LHN0 102 aa8.98□□□□□ -0.97
PACSIN3-209ENST00000532457 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.84□□□□□ -0.99
PACSIN3-209ENST00000532457 MACF1Q9UPN3 7388 aaKnown RBP8.84□□□□□ -0.99
PACSIN3-209ENST00000532457 KRTAP10-7P60409 375 aaPredicted RBP8.79□□□□□ -1
PACSIN3-209ENST00000532457 TNP1P09430 55 aa8.75□□□□□ -1.01
PACSIN3-209ENST00000532457 SYNE2Q8WXH0 6885 aaKnown RBP8.66□□□□□ -1.02
PACSIN3-209ENST00000532457 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
PACSIN3-209ENST00000532457 KRTAP9-7A8MTY7 169 aa8.59□□□□□ -1.03
PACSIN3-209ENST00000532457 KMT2DO14686 5537 aa8.56□□□□□ -1.04
PACSIN3-209ENST00000532457 KRTAP4-8A0A0G2JLE6 195 aa8.52□□□□□ -1.04
PACSIN3-209ENST00000532457 KRTAP4-8Q9BYQ9 185 aa8.52□□□□□ -1.04
PACSIN3-209ENST00000532457 LCE3AQ5TA76 89 aa8.51□□□□□ -1.05
PACSIN3-209ENST00000532457 KRTAP6-3Q3LI67 103 aa8.47□□□□□ -1.05
PACSIN3-209ENST00000532457 PP632Q6XCG6 107 aa8.47□□□□□ -1.05
PACSIN3-209ENST00000532457 KRTAP23-1A1A580 65 aa8.42□□□□□ -1.06
PACSIN3-209ENST00000532457 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
PACSIN3-209ENST00000532457 KRTAP5-9P26371 169 aa8.32□□□□□ -1.08
PACSIN3-209ENST00000532457 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
PACSIN3-209ENST00000532457 KRTAP19-5Q3LI72 72 aa8.22□□□□□ -1.09
PACSIN3-209ENST00000532457 SPRR2FQ96RM1 72 aa8.22□□□□□ -1.09
PACSIN3-209ENST00000532457 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
PACSIN3-209ENST00000532457 KRTAP12-3P60328 96 aa8.14□□□□□ -1.11
PACSIN3-209ENST00000532457 MDN1Q9NU22 5596 aa8.11□□□□□ -1.11
PACSIN3-209ENST00000532457 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms