RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 LCA10Q71F78 164 aa7.84□□□□□ -1.15
SRPRA-206ENST00000532259 PCLOQ9Y6V0 5065 aa7.82□□□□□ -1.16
SRPRA-206ENST00000532259 SPTSSBQ8NFR3 76 aa7.78□□□□□ -1.16
SRPRA-206ENST00000532259 HERC1Q15751 4861 aa7.74□□□□□ -1.17
SRPRA-206ENST00000532259 CDC42SE1Q9NRR8 79 aa7.73□□□□□ -1.17
SRPRA-206ENST00000532259 SEC61GP60059 68 aa7.71□□□□□ -1.17
SRPRA-206ENST00000532259 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
SRPRA-206ENST00000532259 UQCR11O14957 56 aa7.65□□□□□ -1.18
SRPRA-206ENST00000532259 MUC2Q02817 5179 aa7.65□□□□□ -1.18
SRPRA-206ENST00000532259 S4R3F8 94 aa7.64□□□□□ -1.19
SRPRA-206ENST00000532259 PMAIP1Q13794 54 aa7.63□□□□□ -1.19
SRPRA-206ENST00000532259 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
SRPRA-206ENST00000532259 KRTAP4-1Q9BYQ7 146 aa7.61□□□□□ -1.19
SRPRA-206ENST00000532259 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
SRPRA-206ENST00000532259 H1FX-AS1Q4G0G2 97 aa7.59□□□□□ -1.19
SRPRA-206ENST00000532259 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.19
SRPRA-206ENST00000532259 SPATA8Q6RVD6 105 aa7.57□□□□□ -1.2
SRPRA-206ENST00000532259 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
SRPRA-206ENST00000532259 A0A1B0GU33 70 aa7.55□□□□□ -1.2
SRPRA-206ENST00000532259 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
SRPRA-206ENST00000532259 H0YAA0 97 aa7.53□□□□□ -1.2
SRPRA-206ENST00000532259 A6NN06 94 aa7.47□□□□□ -1.21
SRPRA-206ENST00000532259 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.21
SRPRA-206ENST00000532259 P0C880 135 aa7.45□□□□□ -1.22
SRPRA-206ENST00000532259 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
SRPRA-206ENST00000532259 ADM2Q7Z4H4 148 aa7.41□□□□□ -1.22
SRPRA-206ENST00000532259 CSAG1Q6PB30 78 aa7.41□□□□□ -1.22
SRPRA-206ENST00000532259 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
SRPRA-206ENST00000532259 A0A0D9SG42 100 aa7.37□□□□□ -1.23
SRPRA-206ENST00000532259 KRTAP19-2Q3LHN2 52 aa7.37□□□□□ -1.23
SRPRA-206ENST00000532259 UBR4Q5T4S7 5183 aa7.34□□□□□ -1.24
SRPRA-206ENST00000532259 RNF213Q63HN8 5207 aa7.32□□□□□ -1.24
SRPRA-206ENST00000532259 KTN1-AS1Q86SY8 53 aa7.32□□□□□ -1.24
SRPRA-206ENST00000532259 FAT4Q6V0I7 4981 aa7.29□□□□□ -1.24
SRPRA-206ENST00000532259 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
SRPRA-206ENST00000532259 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
SRPRA-206ENST00000532259 K7ERS5 55 aa7.16□□□□□ -1.26
SRPRA-206ENST00000532259 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
SRPRA-206ENST00000532259 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
SRPRA-206ENST00000532259 M0QZ58 72 aa7.13□□□□□ -1.27
SRPRA-206ENST00000532259 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
SRPRA-206ENST00000532259 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
SRPRA-206ENST00000532259 LCE2CQ5TA81 110 aa7.1□□□□□ -1.27
SRPRA-206ENST00000532259 R4GN34 69 aa7.1□□□□□ -1.27
SRPRA-206ENST00000532259 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
SRPRA-206ENST00000532259 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
SRPRA-206ENST00000532259 M0R2T5 61 aa6.96□□□□□ -1.3
SRPRA-206ENST00000532259 ROMO1P60602 79 aa6.95□□□□□ -1.3
SRPRA-206ENST00000532259 MT1HP80294 61 aa6.92□□□□□ -1.3
SRPRA-206ENST00000532259 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
SRPRA-206ENST00000532259 C10orf95Q9H7T3 257 aa6.82□□□□□ -1.32
SRPRA-206ENST00000532259 MT1FP04733 61 aa6.72□□□□□ -1.33
SRPRA-206ENST00000532259 CAMK2N1Q7Z7J9 78 aa6.72□□□□□ -1.33
SRPRA-206ENST00000532259 KRTAP9-8Q9BYQ0 159 aa6.71□□□□□ -1.33
SRPRA-206ENST00000532259 MT2AP02795 61 aa6.71□□□□□ -1.34
SRPRA-206ENST00000532259 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
SRPRA-206ENST00000532259 KRTAP19-1Q8IUB9 90 aa6.68□□□□□ -1.34
SRPRA-206ENST00000532259 LCE2AQ5TA79 106 aaPredicted RBP6.66□□□□□ -1.34
SRPRA-206ENST00000532259 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
SRPRA-206ENST00000532259 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
SRPRA-206ENST00000532259 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
SRPRA-206ENST00000532259 MT1BP07438 61 aa6.39□□□□□ -1.39
SRPRA-206ENST00000532259 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
SRPRA-206ENST00000532259 USH2AO75445 5202 aa6.37□□□□□ -1.39
SRPRA-206ENST00000532259 TNP1P09430 55 aa6.35□□□□□ -1.39
SRPRA-206ENST00000532259 LCE2BO14633 110 aa6.28□□□□□ -1.4
SRPRA-206ENST00000532259 MT1XP80297 61 aa6.24□□□□□ -1.41
SRPRA-206ENST00000532259 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
SRPRA-206ENST00000532259 LCE2DQ5TA82 110 aaPredicted RBP6.22□□□□□ -1.41
SRPRA-206ENST00000532259 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
SRPRA-206ENST00000532259 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
SRPRA-206ENST00000532259 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
SRPRA-206ENST00000532259 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
SRPRA-206ENST00000532259 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
SRPRA-206ENST00000532259 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
SRPRA-206ENST00000532259 KMT2DO14686 5537 aa6.05□□□□□ -1.44
SRPRA-206ENST00000532259 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
SRPRA-206ENST00000532259 PRO2289Q9P1D8 64 aa6.02□□□□□ -1.45
SRPRA-206ENST00000532259 H3BS24 57 aa6.01□□□□□ -1.45
SRPRA-206ENST00000532259 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
SRPRA-206ENST00000532259 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
SRPRA-206ENST00000532259 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
SRPRA-206ENST00000532259 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
SRPRA-206ENST00000532259 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
SRPRA-206ENST00000532259 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.48
SRPRA-206ENST00000532259 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.48
SRPRA-206ENST00000532259 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
SRPRA-206ENST00000532259 KRTAP12-3P60328 96 aa5.82□□□□□ -1.48
SRPRA-206ENST00000532259 KRTAP19-6Q3LI70 58 aa5.77□□□□□ -1.48
SRPRA-206ENST00000532259 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
SRPRA-206ENST00000532259 LUZP6Q538Z0 58 aa5.69□□□□□ -1.5
SRPRA-206ENST00000532259 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
SRPRA-206ENST00000532259 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
SRPRA-206ENST00000532259 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
SRPRA-206ENST00000532259 MUC12Q9UKN1 5478 aa5.45□□□□□ -1.54
SRPRA-206ENST00000532259 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
SRPRA-206ENST00000532259 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
SRPRA-206ENST00000532259 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
SRPRA-206ENST00000532259 MT1EP04732 61 aa5.42□□□□□ -1.54
SRPRA-206ENST00000532259 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms