RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 SNURFQ9Y675 71 aa7.7□□□□□ -1.18
LRFN4-203ENST00000531590 KRTAP10-10P60014 251 aa7.69□□□□□ -1.18
LRFN4-203ENST00000531590 CSAG1Q6PB30 78 aa7.67□□□□□ -1.18
LRFN4-203ENST00000531590 C20orf197Q8N268 126 aa7.66□□□□□ -1.18
LRFN4-203ENST00000531590 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
LRFN4-203ENST00000531590 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
LRFN4-203ENST00000531590 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
LRFN4-203ENST00000531590 PCP4P48539 62 aa7.61□□□□□ -1.19
LRFN4-203ENST00000531590 COX7CP15954 63 aa7.6□□□□□ -1.19
LRFN4-203ENST00000531590 ANAPC13Q9BS18 74 aa7.6□□□□□ -1.19
LRFN4-203ENST00000531590 NDUFC1O43677 76 aa7.58□□□□□ -1.2
LRFN4-203ENST00000531590 USH2AO75445 5202 aa7.55□□□□□ -1.2
LRFN4-203ENST00000531590 LCE2BO14633 110 aa7.52□□□□□ -1.21
LRFN4-203ENST00000531590 SPANXA2-OT1Q8N9U9 137 aa7.5□□□□□ -1.21
LRFN4-203ENST00000531590 ACYP2P14621 99 aa7.49□□□□□ -1.21
LRFN4-203ENST00000531590 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
LRFN4-203ENST00000531590 H0YAA0 97 aa7.43□□□□□ -1.22
LRFN4-203ENST00000531590 SSPOA2VEC9 5147 aa7.42□□□□□ -1.22
LRFN4-203ENST00000531590 H7BZZ5 65 aa7.42□□□□□ -1.22
LRFN4-203ENST00000531590 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
LRFN4-203ENST00000531590 CCDC179H3BU77 68 aa7.39□□□□□ -1.23
LRFN4-203ENST00000531590 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
LRFN4-203ENST00000531590 CHKB-CPT1BH3BT56 60 aa7.36□□□□□ -1.23
LRFN4-203ENST00000531590 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.23
LRFN4-203ENST00000531590 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
LRFN4-203ENST00000531590 COA5Q86WW8 74 aa7.3□□□□□ -1.24
LRFN4-203ENST00000531590 SPTSSBQ8NFR3 76 aa7.3□□□□□ -1.24
LRFN4-203ENST00000531590 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
LRFN4-203ENST00000531590 P0C880 135 aa7.29□□□□□ -1.24
LRFN4-203ENST00000531590 KRTAP19-8Q3LI54 63 aa7.24□□□□□ -1.25
LRFN4-203ENST00000531590 MT1BP07438 61 aa7.22□□□□□ -1.25
LRFN4-203ENST00000531590 Q5VV11 94 aa7.18□□□□□ -1.26
LRFN4-203ENST00000531590 TMEM258P61165 79 aa7.17□□□□□ -1.26
LRFN4-203ENST00000531590 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
LRFN4-203ENST00000531590 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.26
LRFN4-203ENST00000531590 R4GN34 69 aa7.14□□□□□ -1.27
LRFN4-203ENST00000531590 M0QZ58 72 aa7.12□□□□□ -1.27
LRFN4-203ENST00000531590 ATP5EP56381 51 aaPredicted RBP7.12□□□□□ -1.27
LRFN4-203ENST00000531590 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
LRFN4-203ENST00000531590 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
LRFN4-203ENST00000531590 LINC01554Q52M75 96 aa7□□□□□ -1.29
LRFN4-203ENST00000531590 SEC61GP60059 68 aa6.97□□□□□ -1.29
LRFN4-203ENST00000531590 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
LRFN4-203ENST00000531590 SERP1Q9Y6X1 66 aa6.97□□□□□ -1.29
LRFN4-203ENST00000531590 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
LRFN4-203ENST00000531590 A6NN06 94 aa6.95□□□□□ -1.3
LRFN4-203ENST00000531590 RPS28P62857 69 aaKnown RBP6.93□□□□□ -1.3
LRFN4-203ENST00000531590 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
LRFN4-203ENST00000531590 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.31
LRFN4-203ENST00000531590 A0A1B0GU69 56 aa6.89□□□□□ -1.31
LRFN4-203ENST00000531590 SYNE2Q8WXH0 6885 aaKnown RBP6.87□□□□□ -1.31
LRFN4-203ENST00000531590 A0A1B0GU33 70 aa6.86□□□□□ -1.31
LRFN4-203ENST00000531590 MT1XP80297 61 aa6.85□□□□□ -1.31
LRFN4-203ENST00000531590 SPATA8Q6RVD6 105 aa6.83□□□□□ -1.32
LRFN4-203ENST00000531590 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
LRFN4-203ENST00000531590 SMIM26A0A096LP01 95 aa6.78□□□□□ -1.32
LRFN4-203ENST00000531590 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
LRFN4-203ENST00000531590 A0A0D9SG42 100 aa6.76□□□□□ -1.33
LRFN4-203ENST00000531590 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
LRFN4-203ENST00000531590 A8MU10 97 aa6.67□□□□□ -1.34
LRFN4-203ENST00000531590 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
LRFN4-203ENST00000531590 V9GYY9 64 aa6.67□□□□□ -1.34
LRFN4-203ENST00000531590 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
LRFN4-203ENST00000531590 Q1T7F1 81 aa6.62□□□□□ -1.35
LRFN4-203ENST00000531590 SPINT4Q6UDR6 99 aa6.62□□□□□ -1.35
LRFN4-203ENST00000531590 KMT2DO14686 5537 aa6.62□□□□□ -1.35
LRFN4-203ENST00000531590 KRTAP12-2P59991 146 aa6.61□□□□□ -1.35
LRFN4-203ENST00000531590 CAMK2N1Q7Z7J9 78 aa6.61□□□□□ -1.35
LRFN4-203ENST00000531590 UQCR11O14957 56 aa6.56□□□□□ -1.36
LRFN4-203ENST00000531590 PSPHP1O15172 72 aa6.56□□□□□ -1.36
LRFN4-203ENST00000531590 KRTAP10-7P60409 375 aaPredicted RBP6.56□□□□□ -1.36
LRFN4-203ENST00000531590 NEBP20929 6669 aa6.5□□□□□ -1.37
LRFN4-203ENST00000531590 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
LRFN4-203ENST00000531590 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.37
LRFN4-203ENST00000531590 KRTAP4-8A0A0G2JLE6 195 aa6.46□□□□□ -1.38
LRFN4-203ENST00000531590 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
LRFN4-203ENST00000531590 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
LRFN4-203ENST00000531590 KRTAP5-9P26371 169 aa6.43□□□□□ -1.38
LRFN4-203ENST00000531590 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
LRFN4-203ENST00000531590 MDN1Q9NU22 5596 aa6.33□□□□□ -1.4
LRFN4-203ENST00000531590 A6NED7 52 aa6.33□□□□□ -1.4
LRFN4-203ENST00000531590 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
LRFN4-203ENST00000531590 SPRR2FQ96RM1 72 aa6.32□□□□□ -1.4
LRFN4-203ENST00000531590 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
LRFN4-203ENST00000531590 K7ERS5 55 aa6.21□□□□□ -1.42
LRFN4-203ENST00000531590 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
LRFN4-203ENST00000531590 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
LRFN4-203ENST00000531590 TNP1P09430 55 aa6.19□□□□□ -1.42
LRFN4-203ENST00000531590 SPRR2EP22531 72 aa6.13□□□□□ -1.43
LRFN4-203ENST00000531590 SPRR2BP35325 72 aa6.13□□□□□ -1.43
LRFN4-203ENST00000531590 SPRR2AP35326 72 aa6.13□□□□□ -1.43
LRFN4-203ENST00000531590 KRTAP19-7Q3SYF9 63 aa6.13□□□□□ -1.43
LRFN4-203ENST00000531590 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
LRFN4-203ENST00000531590 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
LRFN4-203ENST00000531590 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
LRFN4-203ENST00000531590 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
LRFN4-203ENST00000531590 MT1EP04732 61 aa6.05□□□□□ -1.44
LRFN4-203ENST00000531590 KRTAP2-3P0C7H8 128 aa6.05□□□□□ -1.44
LRFN4-203ENST00000531590 KRTAP2-4Q9BYR9 128 aa6.05□□□□□ -1.44
LRFN4-203ENST00000531590 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms