RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 COX7CP15954 63 aa6.24□□□□□ -1.41
TM9SF1-211ENST00000531406 SPINK7P58062 85 aa6.24□□□□□ -1.41
TM9SF1-211ENST00000531406 C7orf65Q6ZTY9 151 aa6.23□□□□□ -1.41
TM9SF1-211ENST00000531406 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
TM9SF1-211ENST00000531406 IGKV2D-30A0A075B6S6 120 aa6.21□□□□□ -1.42
TM9SF1-211ENST00000531406 IGKV2-30P06310 120 aa6.21□□□□□ -1.42
TM9SF1-211ENST00000531406 C1orf64Q8NEQ6 169 aa6.21□□□□□ -1.42
TM9SF1-211ENST00000531406 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
TM9SF1-211ENST00000531406 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
TM9SF1-211ENST00000531406 KLKP1Q107X0 134 aa6.15□□□□□ -1.42
TM9SF1-211ENST00000531406 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
TM9SF1-211ENST00000531406 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
TM9SF1-211ENST00000531406 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
TM9SF1-211ENST00000531406 CCDC179H3BU77 68 aa6.11□□□□□ -1.43
TM9SF1-211ENST00000531406 NDUFC1O43677 76 aa6.1□□□□□ -1.43
TM9SF1-211ENST00000531406 PCP4P48539 62 aa6.09□□□□□ -1.43
TM9SF1-211ENST00000531406 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
TM9SF1-211ENST00000531406 H1FX-AS1Q4G0G2 97 aa6.04□□□□□ -1.44
TM9SF1-211ENST00000531406 C4orf26Q17RF5 130 aa6.03□□□□□ -1.44
TM9SF1-211ENST00000531406 H7BZZ5 65 aa6.01□□□□□ -1.45
TM9SF1-211ENST00000531406 SPANXA2-OT1Q8N9U9 137 aa6.01□□□□□ -1.45
TM9SF1-211ENST00000531406 CYSTM1Q9H1C7 97 aa6.01□□□□□ -1.45
TM9SF1-211ENST00000531406 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
TM9SF1-211ENST00000531406 A8MUN3 132 aa5.99□□□□□ -1.45
TM9SF1-211ENST00000531406 ATP5EP56381 51 aaPredicted RBP5.97□□□□□ -1.45
TM9SF1-211ENST00000531406 TMEM258P61165 79 aa5.96□□□□□ -1.46
TM9SF1-211ENST00000531406 DMAC1Q96GE9 116 aa5.95□□□□□ -1.46
TM9SF1-211ENST00000531406 ACYP2P14621 99 aa5.91□□□□□ -1.46
TM9SF1-211ENST00000531406 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
TM9SF1-211ENST00000531406 S4R3F8 94 aa5.87□□□□□ -1.47
TM9SF1-211ENST00000531406 CHKB-CPT1BH3BT56 60 aa5.85□□□□□ -1.47
TM9SF1-211ENST00000531406 COA5Q86WW8 74 aa5.82□□□□□ -1.48
TM9SF1-211ENST00000531406 A6NN06 94 aa5.8□□□□□ -1.48
TM9SF1-211ENST00000531406 MT1BP07438 61 aa5.8□□□□□ -1.48
TM9SF1-211ENST00000531406 SPTSSBQ8NFR3 76 aa5.8□□□□□ -1.48
TM9SF1-211ENST00000531406 LCA10Q71F78 164 aa5.79□□□□□ -1.48
TM9SF1-211ENST00000531406 Q5VV11 94 aa5.77□□□□□ -1.49
TM9SF1-211ENST00000531406 NEBP20929 6669 aa5.76□□□□□ -1.49
TM9SF1-211ENST00000531406 KRTAP19-8Q3LI54 63 aa5.76□□□□□ -1.49
TM9SF1-211ENST00000531406 CSAG1Q6PB30 78 aa5.76□□□□□ -1.49
TM9SF1-211ENST00000531406 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
TM9SF1-211ENST00000531406 SERP1Q9Y6X1 66 aa5.76□□□□□ -1.49
TM9SF1-211ENST00000531406 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
TM9SF1-211ENST00000531406 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
TM9SF1-211ENST00000531406 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
TM9SF1-211ENST00000531406 RPS28P62857 69 aaKnown RBP5.64□□□□□ -1.51
TM9SF1-211ENST00000531406 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
TM9SF1-211ENST00000531406 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
TM9SF1-211ENST00000531406 KRTAP5-9P26371 169 aa5.63□□□□□ -1.51
TM9SF1-211ENST00000531406 H0YAA0 97 aa5.59□□□□□ -1.51
TM9SF1-211ENST00000531406 SEC61GP60059 68 aa5.59□□□□□ -1.51
TM9SF1-211ENST00000531406 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
TM9SF1-211ENST00000531406 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
TM9SF1-211ENST00000531406 V9GYY9 64 aa5.57□□□□□ -1.52
TM9SF1-211ENST00000531406 KMT2DO14686 5537 aa5.57□□□□□ -1.52
TM9SF1-211ENST00000531406 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
TM9SF1-211ENST00000531406 A0A1B0GU69 56 aa5.54□□□□□ -1.52
TM9SF1-211ENST00000531406 ADM2Q7Z4H4 148 aa5.54□□□□□ -1.52
TM9SF1-211ENST00000531406 MDN1Q9NU22 5596 aa5.53□□□□□ -1.52
TM9SF1-211ENST00000531406 LINC01558Q9Y6Z2 57 aa5.53□□□□□ -1.52
TM9SF1-211ENST00000531406 Q1T7F1 81 aa5.5□□□□□ -1.53
TM9SF1-211ENST00000531406 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
TM9SF1-211ENST00000531406 P0C880 135 aa5.45□□□□□ -1.54
TM9SF1-211ENST00000531406 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
TM9SF1-211ENST00000531406 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
TM9SF1-211ENST00000531406 PSPHP1O15172 72 aa5.4□□□□□ -1.54
TM9SF1-211ENST00000531406 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
TM9SF1-211ENST00000531406 R4GN34 69 aa5.4□□□□□ -1.54
TM9SF1-211ENST00000531406 A0A1B0GU33 70 aa5.39□□□□□ -1.55
TM9SF1-211ENST00000531406 MT1XP80297 61 aa5.39□□□□□ -1.55
TM9SF1-211ENST00000531406 SPRR2EP22531 72 aa5.38□□□□□ -1.55
TM9SF1-211ENST00000531406 SPRR2BP35325 72 aa5.38□□□□□ -1.55
TM9SF1-211ENST00000531406 SPRR2AP35326 72 aa5.38□□□□□ -1.55
TM9SF1-211ENST00000531406 M0QZ58 72 aa5.37□□□□□ -1.55
TM9SF1-211ENST00000531406 UQCR11O14957 56 aa5.34□□□□□ -1.55
TM9SF1-211ENST00000531406 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
TM9SF1-211ENST00000531406 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
TM9SF1-211ENST00000531406 KRTAP12-2P59991 146 aa5.3□□□□□ -1.56
TM9SF1-211ENST00000531406 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
TM9SF1-211ENST00000531406 A6NED7 52 aa5.29□□□□□ -1.56
TM9SF1-211ENST00000531406 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
TM9SF1-211ENST00000531406 A0A0A0MQY5 61 aa5.26□□□□□ -1.57
TM9SF1-211ENST00000531406 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
TM9SF1-211ENST00000531406 LINC01554Q52M75 96 aa5.26□□□□□ -1.57
TM9SF1-211ENST00000531406 KRTAP2-2Q9BYT5 123 aa5.26□□□□□ -1.57
TM9SF1-211ENST00000531406 KRTAP2-1Q9BYU5 128 aa5.26□□□□□ -1.57
TM9SF1-211ENST00000531406 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
TM9SF1-211ENST00000531406 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
TM9SF1-211ENST00000531406 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
TM9SF1-211ENST00000531406 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
TM9SF1-211ENST00000531406 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
TM9SF1-211ENST00000531406 A0A0D9SG42 100 aa5.21□□□□□ -1.58
TM9SF1-211ENST00000531406 SPRR2DP22532 72 aa5.2□□□□□ -1.58
TM9SF1-211ENST00000531406 A8MU10 97 aa5.16□□□□□ -1.58
TM9SF1-211ENST00000531406 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
TM9SF1-211ENST00000531406 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
TM9SF1-211ENST00000531406 K7ERS5 55 aa5.12□□□□□ -1.59
TM9SF1-211ENST00000531406 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
TM9SF1-211ENST00000531406 SPINT4Q6UDR6 99 aa5.12□□□□□ -1.59
TM9SF1-211ENST00000531406 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms