RNA–Protein interactions for RNA: ENST00000531184.5

GSDMD-211, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,213 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-211ENST00000531184 FLG2Q5D862 2391 aaPredicted RBP11.4□□□□□ -0.58
GSDMD-211ENST00000531184 FAT1Q14517 4588 aa11.4□□□□□ -0.59
GSDMD-211ENST00000531184 KRTAP15-1Q3LI76 137 aa11.39□□□□□ -0.59
GSDMD-211ENST00000531184 HERC2O95714 4834 aa11.31□□□□□ -0.6
GSDMD-211ENST00000531184 VPS13BQ7Z7G8 4022 aa11.3□□□□□ -0.6
GSDMD-211ENST00000531184 TPRXLQ17RH7 258 aa11.28□□□□□ -0.6
GSDMD-211ENST00000531184 Q5VSD8 79 aa11.27□□□□□ -0.61
GSDMD-211ENST00000531184 KRTAP4-5Q9BYR2 181 aa11.26□□□□□ -0.61
GSDMD-211ENST00000531184 COX6B2Q6YFQ2 88 aa11.21□□□□□ -0.61
GSDMD-211ENST00000531184 KRTAP10-4P60372 401 aaPredicted RBP11.2□□□□□ -0.62
GSDMD-211ENST00000531184 ABCA13Q86UQ4 5058 aa11.15□□□□□ -0.62
GSDMD-211ENST00000531184 RPL37P61927 97 aaKnown RBP11.13□□□□□ -0.63
GSDMD-211ENST00000531184 KRTAP13-2Q52LG2 175 aa11.12□□□□□ -0.63
GSDMD-211ENST00000531184 KRTAP3-1Q9BYR8 98 aa11.09□□□□□ -0.63
GSDMD-211ENST00000531184 PCLOQ9Y6V0 5065 aa11.08□□□□□ -0.64
GSDMD-211ENST00000531184 C10orf95Q9H7T3 257 aa11.03□□□□□ -0.64
GSDMD-211ENST00000531184 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
GSDMD-211ENST00000531184 LRP1Q07954 4544 aaKnown RBP10.97□□□□□ -0.65
GSDMD-211ENST00000531184 PKHD1L1Q86WI1 4243 aa10.94□□□□□ -0.66
GSDMD-211ENST00000531184 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
GSDMD-211ENST00000531184 LUZP6Q538Z0 58 aa10.86□□□□□ -0.67
GSDMD-211ENST00000531184 FAT3Q8TDW7 4589 aa10.85□□□□□ -0.67
GSDMD-211ENST00000531184 KRTAP13-4Q3LI77 160 aa10.84□□□□□ -0.67
GSDMD-211ENST00000531184 KRTAP10-6P60371 365 aaPredicted RBP10.82□□□□□ -0.68
GSDMD-211ENST00000531184 A0A0D9SG42 100 aa10.82□□□□□ -0.68
GSDMD-211ENST00000531184 DMBT1Q9UGM3 2413 aaPredicted RBP10.79□□□□□ -0.68
GSDMD-211ENST00000531184 MT1HL1P0DM35 61 aa10.75□□□□□ -0.69
GSDMD-211ENST00000531184 J3QL48 77 aa10.73□□□□□ -0.69
GSDMD-211ENST00000531184 TNXBP22105 4242 aa10.73□□□□□ -0.69
GSDMD-211ENST00000531184 KRTAP10-8P60410 259 aa10.72□□□□□ -0.69
GSDMD-211ENST00000531184 S4R3F8 94 aa10.72□□□□□ -0.69
GSDMD-211ENST00000531184 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
GSDMD-211ENST00000531184 RPS29P62273 56 aaKnown RBP10.65□□□□□ -0.7
GSDMD-211ENST00000531184 XP32Q5T750 250 aa10.64□□□□□ -0.71
GSDMD-211ENST00000531184 HERC1Q15751 4861 aa10.64□□□□□ -0.71
GSDMD-211ENST00000531184 KRTAP12-2P59991 146 aa10.59□□□□□ -0.71
GSDMD-211ENST00000531184 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
GSDMD-211ENST00000531184 C9orf92A6NGG3 77 aa10.54□□□□□ -0.72
GSDMD-211ENST00000531184 KRTAP12-1P59990 96 aa10.47□□□□□ -0.73
GSDMD-211ENST00000531184 PLAC4Q8WY50 150 aa10.35□□□□□ -0.75
GSDMD-211ENST00000531184 HMCN2Q8NDA2 5059 aa10.32□□□□□ -0.76
GSDMD-211ENST00000531184 SEC61BP60468 96 aaKnown RBP10.25□□□□□ -0.77
GSDMD-211ENST00000531184 LPAP08519 4548 aa10.2□□□□□ -0.78
GSDMD-211ENST00000531184 LRP2P98164 4655 aa10.18□□□□□ -0.78
GSDMD-211ENST00000531184 M0QZ58 72 aa10.15□□□□□ -0.78
GSDMD-211ENST00000531184 UBR4Q5T4S7 5183 aa10.05□□□□□ -0.8
GSDMD-211ENST00000531184 RNF213Q63HN8 5207 aa9.85□□□□□ -0.83
GSDMD-211ENST00000531184 PP632Q6XCG6 107 aa9.82□□□□□ -0.84
GSDMD-211ENST00000531184 MUC2Q02817 5179 aa9.8□□□□□ -0.84
GSDMD-211ENST00000531184 CAMK2N1Q7Z7J9 78 aa9.75□□□□□ -0.85
GSDMD-211ENST00000531184 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
GSDMD-211ENST00000531184 KRTAP4-1Q9BYQ7 146 aa9.63□□□□□ -0.87
GSDMD-211ENST00000531184 R4GN34 69 aa9.62□□□□□ -0.87
GSDMD-211ENST00000531184 PRO2289Q9P1D8 64 aa9.58□□□□□ -0.88
GSDMD-211ENST00000531184 SPRR5A0A1B0GTR4 108 aa9.55□□□□□ -0.88
GSDMD-211ENST00000531184 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
GSDMD-211ENST00000531184 KRTAP19-2Q3LHN2 52 aa9.31□□□□□ -0.92
GSDMD-211ENST00000531184 KRTAP23-1A1A580 65 aa9.27□□□□□ -0.93
GSDMD-211ENST00000531184 INE1O15225 51 aa9.25□□□□□ -0.93
GSDMD-211ENST00000531184 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
GSDMD-211ENST00000531184 LCE2CQ5TA81 110 aa9.25□□□□□ -0.93
GSDMD-211ENST00000531184 LCE2AQ5TA79 106 aaPredicted RBP9.13□□□□□ -0.95
GSDMD-211ENST00000531184 MT1HP80294 61 aa9.1□□□□□ -0.95
GSDMD-211ENST00000531184 TNP1P09430 55 aa9.07□□□□□ -0.96
GSDMD-211ENST00000531184 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
GSDMD-211ENST00000531184 M0R2T5 61 aa8.98□□□□□ -0.97
GSDMD-211ENST00000531184 KRTAP9-8Q9BYQ0 159 aa8.69□□□□□ -1.02
GSDMD-211ENST00000531184 MT2AP02795 61 aa8.61□□□□□ -1.03
GSDMD-211ENST00000531184 MT1FP04733 61 aa8.56□□□□□ -1.04
GSDMD-211ENST00000531184 KRTAP10-10P60014 251 aa8.52□□□□□ -1.05
GSDMD-211ENST00000531184 KRTAP9-2Q9BYQ4 174 aa8.49□□□□□ -1.05
GSDMD-211ENST00000531184 LCE2DQ5TA82 110 aaPredicted RBP8.45□□□□□ -1.06
GSDMD-211ENST00000531184 LCE3AQ5TA76 89 aa8.43□□□□□ -1.06
GSDMD-211ENST00000531184 FSIP2Q5CZC0 6907 aa8.4□□□□□ -1.06
GSDMD-211ENST00000531184 KRTAP9-3Q9BYQ3 159 aa8.39□□□□□ -1.07
GSDMD-211ENST00000531184 LCE2BO14633 110 aa8.28□□□□□ -1.08
GSDMD-211ENST00000531184 KRTAP8-1Q8IUC2 63 aa8.28□□□□□ -1.08
GSDMD-211ENST00000531184 USH2AO75445 5202 aa8.24□□□□□ -1.09
GSDMD-211ENST00000531184 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
GSDMD-211ENST00000531184 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
GSDMD-211ENST00000531184 SPRR2GQ9BYE4 73 aa8.12□□□□□ -1.11
GSDMD-211ENST00000531184 SSPOA2VEC9 5147 aa8.08□□□□□ -1.12
GSDMD-211ENST00000531184 CRCT1Q9UGL9 99 aa8.08□□□□□ -1.12
GSDMD-211ENST00000531184 KRTAP9-6A0A140TA67 174 aa8.02□□□□□ -1.13
GSDMD-211ENST00000531184 KRTAP12-3P60328 96 aa8□□□□□ -1.13
GSDMD-211ENST00000531184 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
GSDMD-211ENST00000531184 MT1BP07438 61 aa7.97□□□□□ -1.13
GSDMD-211ENST00000531184 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
GSDMD-211ENST00000531184 FCGBPQ9Y6R7 5405 aaPredicted RBP7.83□□□□□ -1.16
GSDMD-211ENST00000531184 KRTAP10-5P60370 271 aa7.83□□□□□ -1.16
GSDMD-211ENST00000531184 LCE3CQ5T5A8 94 aa7.61□□□□□ -1.19
GSDMD-211ENST00000531184 MT1XP80297 61 aa7.59□□□□□ -1.19
GSDMD-211ENST00000531184 KRTAP2-3P0C7H8 128 aa7.58□□□□□ -1.2
GSDMD-211ENST00000531184 KRTAP2-4Q9BYR9 128 aa7.58□□□□□ -1.2
GSDMD-211ENST00000531184 KRTAP2-1Q9BYU5 128 aa7.58□□□□□ -1.2
GSDMD-211ENST00000531184 MACF1Q9UPN3 7388 aaKnown RBP7.54□□□□□ -1.2
GSDMD-211ENST00000531184 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
GSDMD-211ENST00000531184 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
GSDMD-211ENST00000531184 SYNE2Q8WXH0 6885 aaKnown RBP7.43□□□□□ -1.22
GSDMD-211ENST00000531184 KRTAP9-6A8MVA2 160 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms