RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 SEC61BP60468 96 aaKnown RBP5.25□□□□□ -1.57
CTNND1-228ENST00000531007 CYP4F30PQ9H0H9 118 aa5.25□□□□□ -1.57
CTNND1-228ENST00000531007 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
CTNND1-228ENST00000531007 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
CTNND1-228ENST00000531007 H7BZZ5 65 aa5.23□□□□□ -1.57
CTNND1-228ENST00000531007 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
CTNND1-228ENST00000531007 TMEM258P61165 79 aa5.23□□□□□ -1.57
CTNND1-228ENST00000531007 SPANXA2-OT1Q8N9U9 137 aa5.23□□□□□ -1.57
CTNND1-228ENST00000531007 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
CTNND1-228ENST00000531007 SPINK7P58062 85 aa5.19□□□□□ -1.58
CTNND1-228ENST00000531007 PCOTHQ58A44 107 aa5.18□□□□□ -1.58
CTNND1-228ENST00000531007 CYSTM1Q9H1C7 97 aa5.18□□□□□ -1.58
CTNND1-228ENST00000531007 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
CTNND1-228ENST00000531007 FAM236DA0A1B0GTK5 79 aa5.15□□□□□ -1.59
CTNND1-228ENST00000531007 FAM236CP0DP71 79 aa5.15□□□□□ -1.59
CTNND1-228ENST00000531007 A8MUN3 132 aa5.14□□□□□ -1.59
CTNND1-228ENST00000531007 HRES1P13985 223 aa5.14□□□□□ -1.59
CTNND1-228ENST00000531007 LRP2P98164 4655 aa5.14□□□□□ -1.59
CTNND1-228ENST00000531007 LPAP08519 4548 aa5.12□□□□□ -1.59
CTNND1-228ENST00000531007 UBR4Q5T4S7 5183 aa5.11□□□□□ -1.59
CTNND1-228ENST00000531007 DMAC1Q96GE9 116 aa5.1□□□□□ -1.59
CTNND1-228ENST00000531007 MUC17Q685J3 4493 aa5.09□□□□□ -1.59
CTNND1-228ENST00000531007 ACYP2P14621 99 aa5.09□□□□□ -1.59
CTNND1-228ENST00000531007 RBM12B-AS1Q9P1G2 102 aa5.08□□□□□ -1.6
CTNND1-228ENST00000531007 COX6B2Q6YFQ2 88 aa5.07□□□□□ -1.6
CTNND1-228ENST00000531007 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
CTNND1-228ENST00000531007 C4orf26Q17RF5 130 aa5.06□□□□□ -1.6
CTNND1-228ENST00000531007 SERP1Q9Y6X1 66 aa5.06□□□□□ -1.6
CTNND1-228ENST00000531007 MPLKIPQ8TAP9 179 aa5.05□□□□□ -1.6
CTNND1-228ENST00000531007 H1FX-AS1Q4G0G2 97 aa4.99□□□□□ -1.61
CTNND1-228ENST00000531007 COA5Q86WW8 74 aa4.99□□□□□ -1.61
CTNND1-228ENST00000531007 CHKB-CPT1BH3BT56 60 aa4.98□□□□□ -1.61
CTNND1-228ENST00000531007 SPTSSBQ8NFR3 76 aa4.98□□□□□ -1.61
CTNND1-228ENST00000531007 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
CTNND1-228ENST00000531007 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
CTNND1-228ENST00000531007 SMIM26A0A096LP01 95 aa4.92□□□□□ -1.62
CTNND1-228ENST00000531007 S4R3F8 94 aa4.91□□□□□ -1.62
CTNND1-228ENST00000531007 V9GYY9 64 aa4.91□□□□□ -1.62
CTNND1-228ENST00000531007 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
CTNND1-228ENST00000531007 MUC2Q02817 5179 aa4.87□□□□□ -1.63
CTNND1-228ENST00000531007 LCA10Q71F78 164 aa4.86□□□□□ -1.63
CTNND1-228ENST00000531007 Q1T7F1 81 aa4.85□□□□□ -1.63
CTNND1-228ENST00000531007 CSAG1Q6PB30 78 aa4.85□□□□□ -1.63
CTNND1-228ENST00000531007 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
CTNND1-228ENST00000531007 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
CTNND1-228ENST00000531007 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
CTNND1-228ENST00000531007 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
CTNND1-228ENST00000531007 SEC61GP60059 68 aa4.8□□□□□ -1.64
CTNND1-228ENST00000531007 H0YAA0 97 aa4.77□□□□□ -1.65
CTNND1-228ENST00000531007 A0A1B0GU69 56 aa4.76□□□□□ -1.65
CTNND1-228ENST00000531007 FAT4Q6V0I7 4981 aa4.74□□□□□ -1.65
CTNND1-228ENST00000531007 MT1HP80294 61 aa4.71□□□□□ -1.66
CTNND1-228ENST00000531007 M0R2T5 61 aa4.69□□□□□ -1.66
CTNND1-228ENST00000531007 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
CTNND1-228ENST00000531007 PSPHP1O15172 72 aa4.67□□□□□ -1.66
CTNND1-228ENST00000531007 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
CTNND1-228ENST00000531007 Q5VV11 94 aa4.65□□□□□ -1.67
CTNND1-228ENST00000531007 ADM2Q7Z4H4 148 aa4.65□□□□□ -1.67
CTNND1-228ENST00000531007 MT3P25713 68 aa4.64□□□□□ -1.67
CTNND1-228ENST00000531007 UQCR11O14957 56 aa4.63□□□□□ -1.67
CTNND1-228ENST00000531007 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
CTNND1-228ENST00000531007 A0A1B0GU33 70 aa4.62□□□□□ -1.67
CTNND1-228ENST00000531007 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.61□□□□□ -1.67
CTNND1-228ENST00000531007 M0QZ58 72 aa4.6□□□□□ -1.67
CTNND1-228ENST00000531007 A6NED7 52 aa4.58□□□□□ -1.68
CTNND1-228ENST00000531007 P0C880 135 aa4.58□□□□□ -1.68
CTNND1-228ENST00000531007 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
CTNND1-228ENST00000531007 R4GN34 69 aa4.55□□□□□ -1.68
CTNND1-228ENST00000531007 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
CTNND1-228ENST00000531007 SPATA8Q6RVD6 105 aa4.54□□□□□ -1.68
CTNND1-228ENST00000531007 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
CTNND1-228ENST00000531007 A0A0A0MQY5 61 aa4.5□□□□□ -1.69
CTNND1-228ENST00000531007 MT2AP02795 61 aa4.5□□□□□ -1.69
CTNND1-228ENST00000531007 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
CTNND1-228ENST00000531007 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
CTNND1-228ENST00000531007 BRK1Q8WUW1 75 aa4.47□□□□□ -1.69
CTNND1-228ENST00000531007 A6NN06 94 aa4.45□□□□□ -1.7
CTNND1-228ENST00000531007 MT1FP04733 61 aa4.45□□□□□ -1.7
CTNND1-228ENST00000531007 KRTAP13-4Q3LI77 160 aa4.45□□□□□ -1.7
CTNND1-228ENST00000531007 SPRR2GQ9BYE4 73 aa4.45□□□□□ -1.7
CTNND1-228ENST00000531007 K7ERS5 55 aa4.43□□□□□ -1.7
CTNND1-228ENST00000531007 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
CTNND1-228ENST00000531007 A0A0D9SG42 100 aa4.37□□□□□ -1.71
CTNND1-228ENST00000531007 A8MU10 97 aa4.37□□□□□ -1.71
CTNND1-228ENST00000531007 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
CTNND1-228ENST00000531007 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
CTNND1-228ENST00000531007 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
CTNND1-228ENST00000531007 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
CTNND1-228ENST00000531007 SPINT4Q6UDR6 99 aa4.32□□□□□ -1.72
CTNND1-228ENST00000531007 PLAC4Q8WY50 150 aa4.31□□□□□ -1.72
CTNND1-228ENST00000531007 KRTAP12-2P59991 146 aa4.29□□□□□ -1.72
CTNND1-228ENST00000531007 FSIP2Q5CZC0 6907 aa4.27□□□□□ -1.73
CTNND1-228ENST00000531007 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
CTNND1-228ENST00000531007 CAMK2N1Q7Z7J9 78 aa4.24□□□□□ -1.73
CTNND1-228ENST00000531007 MT1BP07438 61 aa4.21□□□□□ -1.74
CTNND1-228ENST00000531007 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
CTNND1-228ENST00000531007 ROMO1P60602 79 aa4.17□□□□□ -1.74
CTNND1-228ENST00000531007 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
CTNND1-228ENST00000531007 USH2AO75445 5202 aa4.16□□□□□ -1.74
CTNND1-228ENST00000531007 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms