RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
GMDS-208ENST00000530927 C7orf65Q6ZTY9 151 aa9.18□□□□□ -0.94
GMDS-208ENST00000530927 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
GMDS-208ENST00000530927 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
GMDS-208ENST00000530927 MT2AP02795 61 aa9.15□□□□□ -0.94
GMDS-208ENST00000530927 LINC00208Q96KT6 92 aa9.14□□□□□ -0.95
GMDS-208ENST00000530927 CRCT1Q9UGL9 99 aa9.14□□□□□ -0.95
GMDS-208ENST00000530927 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
GMDS-208ENST00000530927 MT1FP04733 61 aa9.1□□□□□ -0.95
GMDS-208ENST00000530927 C1orf64Q8NEQ6 169 aa9.1□□□□□ -0.95
GMDS-208ENST00000530927 SVIPQ8NHG7 77 aa9.05□□□□□ -0.96
GMDS-208ENST00000530927 C4orf26Q17RF5 130 aa9.02□□□□□ -0.97
GMDS-208ENST00000530927 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
GMDS-208ENST00000530927 KRTAP10-10P60014 251 aa9□□□□□ -0.97
GMDS-208ENST00000530927 KRTAP9-3Q9BYQ3 159 aa8.96□□□□□ -0.98
GMDS-208ENST00000530927 Q1T7F1 81 aa8.93□□□□□ -0.98
GMDS-208ENST00000530927 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
GMDS-208ENST00000530927 V9GYY9 64 aa8.92□□□□□ -0.98
GMDS-208ENST00000530927 LCE2BO14633 110 aa8.91□□□□□ -0.98
GMDS-208ENST00000530927 USH2AO75445 5202 aa8.91□□□□□ -0.98
GMDS-208ENST00000530927 SSPOA2VEC9 5147 aa8.81□□□□□ -1
GMDS-208ENST00000530927 COA5Q86WW8 74 aa8.8□□□□□ -1
GMDS-208ENST00000530927 A8MUN3 132 aa8.77□□□□□ -1.01
GMDS-208ENST00000530927 S4R3F8 94 aa8.75□□□□□ -1.01
GMDS-208ENST00000530927 LCA10Q71F78 164 aa8.73□□□□□ -1.01
GMDS-208ENST00000530927 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
GMDS-208ENST00000530927 ACYP2P14621 99 aa8.71□□□□□ -1.02
GMDS-208ENST00000530927 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
GMDS-208ENST00000530927 KRTAP19-1Q8IUB9 90 aa8.68□□□□□ -1.02
GMDS-208ENST00000530927 LINC01558Q9Y6Z2 57 aa8.64□□□□□ -1.03
GMDS-208ENST00000530927 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
GMDS-208ENST00000530927 PSPHP1O15172 72 aa8.6□□□□□ -1.03
GMDS-208ENST00000530927 BRK1Q8WUW1 75 aa8.6□□□□□ -1.03
GMDS-208ENST00000530927 Q5VV11 94 aa8.59□□□□□ -1.03
GMDS-208ENST00000530927 FCGBPQ9Y6R7 5405 aaPredicted RBP8.57□□□□□ -1.04
GMDS-208ENST00000530927 PRR15LQ9BU68 103 aa8.56□□□□□ -1.04
GMDS-208ENST00000530927 CHKB-CPT1BH3BT56 60 aa8.53□□□□□ -1.04
GMDS-208ENST00000530927 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
GMDS-208ENST00000530927 KRTAP19-6Q3LI70 58 aa8.51□□□□□ -1.05
GMDS-208ENST00000530927 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
GMDS-208ENST00000530927 A6NED7 52 aa8.39□□□□□ -1.07
GMDS-208ENST00000530927 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
GMDS-208ENST00000530927 MT1BP07438 61 aa8.38□□□□□ -1.07
GMDS-208ENST00000530927 CDC42SE1Q9NRR8 79 aa8.37□□□□□ -1.07
GMDS-208ENST00000530927 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
GMDS-208ENST00000530927 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
GMDS-208ENST00000530927 A0A1B0GU69 56 aa8.32□□□□□ -1.08
GMDS-208ENST00000530927 H0YAA0 97 aa8.32□□□□□ -1.08
GMDS-208ENST00000530927 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
GMDS-208ENST00000530927 ADM2Q7Z4H4 148 aa8.29□□□□□ -1.08
GMDS-208ENST00000530927 CRIPTQ9P021 101 aa8.22□□□□□ -1.09
GMDS-208ENST00000530927 SEC61GP60059 68 aa8.2□□□□□ -1.1
GMDS-208ENST00000530927 UQCR11O14957 56 aa8.2□□□□□ -1.1
GMDS-208ENST00000530927 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
GMDS-208ENST00000530927 PMAIP1Q13794 54 aa8.17□□□□□ -1.1
GMDS-208ENST00000530927 SYNE2Q8WXH0 6885 aaKnown RBP8.16□□□□□ -1.1
GMDS-208ENST00000530927 A6NN06 94 aa8.16□□□□□ -1.1
GMDS-208ENST00000530927 A8MU10 97 aa8.16□□□□□ -1.1
GMDS-208ENST00000530927 P0C880 135 aa8.14□□□□□ -1.11
GMDS-208ENST00000530927 KRTAP10-5P60370 271 aa8.11□□□□□ -1.11
GMDS-208ENST00000530927 MIR22HGQ0VDD5 57 aa8.1□□□□□ -1.11
GMDS-208ENST00000530927 KTN1-AS1Q86SY8 53 aa8.02□□□□□ -1.13
GMDS-208ENST00000530927 R4GN34 69 aa8□□□□□ -1.13
GMDS-208ENST00000530927 M0QZ58 72 aa7.99□□□□□ -1.13
GMDS-208ENST00000530927 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
GMDS-208ENST00000530927 A0A1B0GU33 70 aa7.95□□□□□ -1.14
GMDS-208ENST00000530927 LOC100996750A0A140TA64 210 aa7.9□□□□□ -1.14
GMDS-208ENST00000530927 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
GMDS-208ENST00000530927 KRTAP4-6Q9BYQ5 205 aa7.9□□□□□ -1.14
GMDS-208ENST00000530927 MT1XP80297 61 aa7.89□□□□□ -1.15
GMDS-208ENST00000530927 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
GMDS-208ENST00000530927 KRTAP13-4Q3LI77 160 aa7.79□□□□□ -1.16
GMDS-208ENST00000530927 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
GMDS-208ENST00000530927 K7ERS5 55 aa7.73□□□□□ -1.17
GMDS-208ENST00000530927 KMT2DO14686 5537 aa7.72□□□□□ -1.17
GMDS-208ENST00000530927 MUC12Q9UKN1 5478 aa7.69□□□□□ -1.18
GMDS-208ENST00000530927 KRTAP5-9P26371 169 aa7.67□□□□□ -1.18
GMDS-208ENST00000530927 A0A0D9SG42 100 aa7.62□□□□□ -1.19
GMDS-208ENST00000530927 NEBP20929 6669 aa7.61□□□□□ -1.19
GMDS-208ENST00000530927 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
GMDS-208ENST00000530927 KRTAP10-7P60409 375 aaPredicted RBP7.57□□□□□ -1.2
GMDS-208ENST00000530927 KRTAP4-8A0A0G2JLE6 195 aa7.55□□□□□ -1.2
GMDS-208ENST00000530927 KRTAP4-8Q9BYQ9 185 aa7.55□□□□□ -1.2
GMDS-208ENST00000530927 SPRR2FQ96RM1 72 aa7.52□□□□□ -1.21
GMDS-208ENST00000530927 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
GMDS-208ENST00000530927 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
GMDS-208ENST00000530927 PRAC1Q96KF2 57 aa7.5□□□□□ -1.21
GMDS-208ENST00000530927 MDN1Q9NU22 5596 aa7.49□□□□□ -1.21
GMDS-208ENST00000530927 KRTAP12-1P59990 96 aa7.49□□□□□ -1.21
GMDS-208ENST00000530927 KRTAP10-12P60413 245 aa7.45□□□□□ -1.22
GMDS-208ENST00000530927 ROMO1P60602 79 aa7.44□□□□□ -1.22
GMDS-208ENST00000530927 CAMK2N1Q7Z7J9 78 aa7.44□□□□□ -1.22
GMDS-208ENST00000530927 SPRR2EP22531 72 aa7.37□□□□□ -1.23
GMDS-208ENST00000530927 SPRR2BP35325 72 aa7.37□□□□□ -1.23
GMDS-208ENST00000530927 SPRR2AP35326 72 aa7.37□□□□□ -1.23
GMDS-208ENST00000530927 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
GMDS-208ENST00000530927 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
GMDS-208ENST00000530927 LCE1AQ5T7P2 110 aa7.3□□□□□ -1.24
GMDS-208ENST00000530927 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
GMDS-208ENST00000530927 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms