RNA–Protein interactions for RNA: ENST00000530301.5

RDX-210, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-210ENST00000530301 HMCN2Q8NDA2 5059 aa13□□□□□ -0.33
RDX-210ENST00000530301 LCA10Q71F78 164 aa12.98□□□□□ -0.33
RDX-210ENST00000530301 HERC1Q15751 4861 aa12.98□□□□□ -0.33
RDX-210ENST00000530301 SEC61GP60059 68 aa12.93□□□□□ -0.34
RDX-210ENST00000530301 A0A1B0GU69 56 aa12.93□□□□□ -0.34
RDX-210ENST00000530301 PSPHP1O15172 72 aa12.93□□□□□ -0.34
RDX-210ENST00000530301 KRTAP3-3Q9BYR6 98 aa12.91□□□□□ -0.34
RDX-210ENST00000530301 CSAG1Q6PB30 78 aa12.85□□□□□ -0.35
RDX-210ENST00000530301 Q5VV11 94 aa12.84□□□□□ -0.35
RDX-210ENST00000530301 KRTAP19-2Q3LHN2 52 aa12.82□□□□□ -0.36
RDX-210ENST00000530301 H0YAA0 97 aa12.62□□□□□ -0.39
RDX-210ENST00000530301 A6NED7 52 aa12.62□□□□□ -0.39
RDX-210ENST00000530301 UQCR11O14957 56 aa12.59□□□□□ -0.39
RDX-210ENST00000530301 A0A1B0GU33 70 aa12.52□□□□□ -0.41
RDX-210ENST00000530301 LCE2CQ5TA81 110 aa12.49□□□□□ -0.41
RDX-210ENST00000530301 KRTAP10-6P60371 365 aaPredicted RBP12.47□□□□□ -0.41
RDX-210ENST00000530301 BRK1Q8WUW1 75 aa12.47□□□□□ -0.41
RDX-210ENST00000530301 ADM2Q7Z4H4 148 aa12.47□□□□□ -0.41
RDX-210ENST00000530301 KRTAP3-2Q9BYR7 98 aa12.46□□□□□ -0.42
RDX-210ENST00000530301 CDC42SE1Q9NRR8 79 aa12.45□□□□□ -0.42
RDX-210ENST00000530301 MIR22HGQ0VDD5 57 aa12.4□□□□□ -0.42
RDX-210ENST00000530301 SPATA8Q6RVD6 105 aa12.4□□□□□ -0.42
RDX-210ENST00000530301 MUC2Q02817 5179 aa12.37□□□□□ -0.43
RDX-210ENST00000530301 P0C880 135 aa12.33□□□□□ -0.44
RDX-210ENST00000530301 FLGP20930 4061 aaPredicted RBP12.32□□□□□ -0.44
RDX-210ENST00000530301 UBR4Q5T4S7 5183 aa12.31□□□□□ -0.44
RDX-210ENST00000530301 PRO0628Q9UI54 55 aa12.3□□□□□ -0.44
RDX-210ENST00000530301 RNF213Q63HN8 5207 aa12.28□□□□□ -0.44
RDX-210ENST00000530301 MT1HP80294 61 aa12.27□□□□□ -0.44
RDX-210ENST00000530301 M0QZ58 72 aa12.26□□□□□ -0.45
RDX-210ENST00000530301 M0R2T5 61 aa12.24□□□□□ -0.45
RDX-210ENST00000530301 CRIPTQ9P021 101 aa12.11□□□□□ -0.47
RDX-210ENST00000530301 A8MU10 97 aa12.1□□□□□ -0.47
RDX-210ENST00000530301 R4GN34 69 aa12.09□□□□□ -0.47
RDX-210ENST00000530301 KRTAP13-4Q3LI77 160 aa12.06□□□□□ -0.48
RDX-210ENST00000530301 K7ERS5 55 aa11.97□□□□□ -0.49
RDX-210ENST00000530301 FAT4Q6V0I7 4981 aa11.93□□□□□ -0.5
RDX-210ENST00000530301 A0A0D9SG42 100 aa11.89□□□□□ -0.51
RDX-210ENST00000530301 LORP23490 312 aaPredicted RBP11.89□□□□□ -0.51
RDX-210ENST00000530301 PMAIP1Q13794 54 aa11.86□□□□□ -0.51
RDX-210ENST00000530301 KRTAP9-8Q9BYQ0 159 aa11.83□□□□□ -0.52
RDX-210ENST00000530301 MT2AP02795 61 aa11.79□□□□□ -0.52
RDX-210ENST00000530301 LCE2AQ5TA79 106 aaPredicted RBP11.78□□□□□ -0.52
RDX-210ENST00000530301 KRTAP10-10P60014 251 aa11.76□□□□□ -0.53
RDX-210ENST00000530301 A6NN06 94 aa11.76□□□□□ -0.53
RDX-210ENST00000530301 LINC01554Q52M75 96 aa11.75□□□□□ -0.53
RDX-210ENST00000530301 MT1FP04733 61 aa11.7□□□□□ -0.54
RDX-210ENST00000530301 KRTAP12-1P59990 96 aa11.7□□□□□ -0.54
RDX-210ENST00000530301 SPRR2GQ9BYE4 73 aa11.7□□□□□ -0.54
RDX-210ENST00000530301 SPINT4Q6UDR6 99 aa11.67□□□□□ -0.54
RDX-210ENST00000530301 KRTAP12-2P59991 146 aa11.62□□□□□ -0.55
RDX-210ENST00000530301 KRTAP19-1Q8IUB9 90 aa11.55□□□□□ -0.56
RDX-210ENST00000530301 KRTAP9-3Q9BYQ3 159 aa11.42□□□□□ -0.58
RDX-210ENST00000530301 KTN1-AS1Q86SY8 53 aa11.39□□□□□ -0.59
RDX-210ENST00000530301 PLAC4Q8WY50 150 aa11.39□□□□□ -0.59
RDX-210ENST00000530301 KRTAP19-8Q3LI54 63 aa11.37□□□□□ -0.59
RDX-210ENST00000530301 ROMO1P60602 79 aa11.36□□□□□ -0.59
RDX-210ENST00000530301 CAMK2N1Q7Z7J9 78 aa11.33□□□□□ -0.6
RDX-210ENST00000530301 SVIPQ8NHG7 77 aa11.33□□□□□ -0.6
RDX-210ENST00000530301 MT1BP07438 61 aa11.11□□□□□ -0.63
RDX-210ENST00000530301 C10orf95Q9H7T3 257 aa11.04□□□□□ -0.64
RDX-210ENST00000530301 LCE2BO14633 110 aa11.02□□□□□ -0.65
RDX-210ENST00000530301 KRTAP25-1Q3LHN0 102 aa10.93□□□□□ -0.66
RDX-210ENST00000530301 PRAC1Q96KF2 57 aa10.92□□□□□ -0.66
RDX-210ENST00000530301 PRO2289Q9P1D8 64 aa10.87□□□□□ -0.67
RDX-210ENST00000530301 TNP1P09430 55 aa10.84□□□□□ -0.67
RDX-210ENST00000530301 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
RDX-210ENST00000530301 MT1XP80297 61 aa10.77□□□□□ -0.69
RDX-210ENST00000530301 KRTAP10-5P60370 271 aa10.75□□□□□ -0.69
RDX-210ENST00000530301 KRTAP23-1A1A580 65 aa10.64□□□□□ -0.71
RDX-210ENST00000530301 PP632Q6XCG6 107 aa10.64□□□□□ -0.71
RDX-210ENST00000530301 KRTAP19-6Q3LI70 58 aa10.46□□□□□ -0.74
RDX-210ENST00000530301 USH2AO75445 5202 aa10.45□□□□□ -0.74
RDX-210ENST00000530301 KRTAP10-12P60413 245 aa10.31□□□□□ -0.76
RDX-210ENST00000530301 KRTAP10-7P60409 375 aaPredicted RBP10.29□□□□□ -0.76
RDX-210ENST00000530301 LCE3AQ5TA76 89 aa10.21□□□□□ -0.78
RDX-210ENST00000530301 KRTAP9-2Q9BYQ4 174 aa10.19□□□□□ -0.78
RDX-210ENST00000530301 KRTAP8-1Q8IUC2 63 aa10.12□□□□□ -0.79
RDX-210ENST00000530301 SSPOA2VEC9 5147 aa10.11□□□□□ -0.79
RDX-210ENST00000530301 CRCT1Q9UGL9 99 aa9.89□□□□□ -0.83
RDX-210ENST00000530301 KRTAP12-3P60328 96 aa9.88□□□□□ -0.83
RDX-210ENST00000530301 KRTAP4-8A0A0G2JLE6 195 aa9.84□□□□□ -0.83
RDX-210ENST00000530301 KRTAP4-8Q9BYQ9 185 aa9.84□□□□□ -0.83
RDX-210ENST00000530301 FSIP2Q5CZC0 6907 aa9.83□□□□□ -0.84
RDX-210ENST00000530301 KRTAP19-5Q3LI72 72 aa9.73□□□□□ -0.85
RDX-210ENST00000530301 KRTAP15-1Q3LI76 137 aa9.72□□□□□ -0.85
RDX-210ENST00000530301 FCGBPQ9Y6R7 5405 aaPredicted RBP9.68□□□□□ -0.86
RDX-210ENST00000530301 KRTAP19-7Q3SYF9 63 aa9.61□□□□□ -0.87
RDX-210ENST00000530301 KRTAP19-4Q3LI73 84 aa9.56□□□□□ -0.88
RDX-210ENST00000530301 KMT2DO14686 5537 aa9.46□□□□□ -0.9
RDX-210ENST00000530301 MT1EP04732 61 aa9.46□□□□□ -0.9
RDX-210ENST00000530301 KRTAP9-6A0A140TA67 174 aa9.4□□□□□ -0.91
RDX-210ENST00000530301 SPRR5A0A1B0GTR4 108 aa9.32□□□□□ -0.92
RDX-210ENST00000530301 MT1LQ93083 61 aa9.28□□□□□ -0.92
RDX-210ENST00000530301 LCE3CQ5T5A8 94 aa9.24□□□□□ -0.93
RDX-210ENST00000530301 SPRR2FQ96RM1 72 aa9.24□□□□□ -0.93
RDX-210ENST00000530301 KRTAP5-9P26371 169 aa9.19□□□□□ -0.94
RDX-210ENST00000530301 LUZP6Q538Z0 58 aa9.15□□□□□ -0.95
RDX-210ENST00000530301 KRTAP19-3Q7Z4W3 81 aa9.13□□□□□ -0.95
RDX-210ENST00000530301 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms