RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 MT2AP02795 61 aa6.79□□□□□ -1.32
CTSB-217ENST00000530296 FAM236AA0A1B0GUQ0 79 aa6.77□□□□□ -1.33
CTSB-217ENST00000530296 FAM236BA0A1B0GV22 79 aa6.77□□□□□ -1.33
CTSB-217ENST00000530296 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
CTSB-217ENST00000530296 V9GYY9 64 aa6.77□□□□□ -1.33
CTSB-217ENST00000530296 S4R3F8 94 aa6.76□□□□□ -1.33
CTSB-217ENST00000530296 LCE2BO14633 110 aa6.75□□□□□ -1.33
CTSB-217ENST00000530296 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
CTSB-217ENST00000530296 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
CTSB-217ENST00000530296 TRAV7A0A075B6U4 112 aa6.73□□□□□ -1.33
CTSB-217ENST00000530296 A8MUN3 132 aa6.73□□□□□ -1.33
CTSB-217ENST00000530296 MT1FP04733 61 aa6.72□□□□□ -1.33
CTSB-217ENST00000530296 PRO0628Q9UI54 55 aa6.72□□□□□ -1.33
CTSB-217ENST00000530296 CSAG1Q6PB30 78 aa6.71□□□□□ -1.34
CTSB-217ENST00000530296 KLKP1Q107X0 134 aa6.69□□□□□ -1.34
CTSB-217ENST00000530296 LCA10Q71F78 164 aa6.68□□□□□ -1.34
CTSB-217ENST00000530296 KRTAP19-6Q3LI70 58 aa6.64□□□□□ -1.35
CTSB-217ENST00000530296 CCDC179H3BU77 68 aa6.62□□□□□ -1.35
CTSB-217ENST00000530296 NDUFC1O43677 76 aa6.62□□□□□ -1.35
CTSB-217ENST00000530296 SERP2Q8N6R1 65 aa6.6□□□□□ -1.35
CTSB-217ENST00000530296 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
CTSB-217ENST00000530296 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
CTSB-217ENST00000530296 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
CTSB-217ENST00000530296 TMEM258P61165 79 aa6.55□□□□□ -1.36
CTSB-217ENST00000530296 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
CTSB-217ENST00000530296 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
CTSB-217ENST00000530296 SNURFQ9Y675 71 aa6.52□□□□□ -1.37
CTSB-217ENST00000530296 ACYP2P14621 99 aa6.51□□□□□ -1.37
CTSB-217ENST00000530296 SYNE2Q8WXH0 6885 aaKnown RBP6.5□□□□□ -1.37
CTSB-217ENST00000530296 H0YAA0 97 aa6.48□□□□□ -1.37
CTSB-217ENST00000530296 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
CTSB-217ENST00000530296 COX7CP15954 63 aa6.46□□□□□ -1.38
CTSB-217ENST00000530296 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
CTSB-217ENST00000530296 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
CTSB-217ENST00000530296 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
CTSB-217ENST00000530296 PMAIP1Q13794 54 aa6.37□□□□□ -1.39
CTSB-217ENST00000530296 ADM2Q7Z4H4 148 aa6.37□□□□□ -1.39
CTSB-217ENST00000530296 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
CTSB-217ENST00000530296 SERP1Q9Y6X1 66 aa6.35□□□□□ -1.39
CTSB-217ENST00000530296 SMIM26A0A096LP01 95 aa6.34□□□□□ -1.39
CTSB-217ENST00000530296 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
CTSB-217ENST00000530296 Q5VV11 94 aa6.29□□□□□ -1.4
CTSB-217ENST00000530296 H7BZZ5 65 aa6.28□□□□□ -1.4
CTSB-217ENST00000530296 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
CTSB-217ENST00000530296 R4GN34 69 aa6.24□□□□□ -1.41
CTSB-217ENST00000530296 A6NN06 94 aa6.23□□□□□ -1.41
CTSB-217ENST00000530296 COA5Q86WW8 74 aa6.23□□□□□ -1.41
CTSB-217ENST00000530296 P0C880 135 aa6.22□□□□□ -1.41
CTSB-217ENST00000530296 BRK1Q8WUW1 75 aa6.22□□□□□ -1.41
CTSB-217ENST00000530296 KRTAP20-1Q3LI63 56 aa6.21□□□□□ -1.42
CTSB-217ENST00000530296 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
CTSB-217ENST00000530296 MUC12Q9UKN1 5478 aa6.2□□□□□ -1.42
CTSB-217ENST00000530296 KRTAP3-2Q9BYR7 98 aa6.19□□□□□ -1.42
CTSB-217ENST00000530296 MT1BP07438 61 aa6.18□□□□□ -1.42
CTSB-217ENST00000530296 M0QZ58 72 aa6.17□□□□□ -1.42
CTSB-217ENST00000530296 NEBP20929 6669 aa6.14□□□□□ -1.43
CTSB-217ENST00000530296 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
CTSB-217ENST00000530296 H3BS24 57 aa6.09□□□□□ -1.43
CTSB-217ENST00000530296 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
CTSB-217ENST00000530296 KRTAP10-5P60370 271 aa6.08□□□□□ -1.44
CTSB-217ENST00000530296 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
CTSB-217ENST00000530296 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
CTSB-217ENST00000530296 MDN1Q9NU22 5596 aa6.02□□□□□ -1.45
CTSB-217ENST00000530296 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
CTSB-217ENST00000530296 KMT2DO14686 5537 aa6□□□□□ -1.45
CTSB-217ENST00000530296 KRTAP2-3P0C7H8 128 aa5.99□□□□□ -1.45
CTSB-217ENST00000530296 KRTAP2-4Q9BYR9 128 aa5.99□□□□□ -1.45
CTSB-217ENST00000530296 A0A1B0GU69 56 aa5.95□□□□□ -1.46
CTSB-217ENST00000530296 Q1T7F1 81 aa5.95□□□□□ -1.46
CTSB-217ENST00000530296 A0A1B0GU33 70 aa5.93□□□□□ -1.46
CTSB-217ENST00000530296 PRR15LQ9BU68 103 aa5.9□□□□□ -1.46
CTSB-217ENST00000530296 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
CTSB-217ENST00000530296 MT1XP80297 61 aa5.87□□□□□ -1.47
CTSB-217ENST00000530296 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
CTSB-217ENST00000530296 SPRR2EP22531 72 aa5.82□□□□□ -1.48
CTSB-217ENST00000530296 SPRR2BP35325 72 aa5.82□□□□□ -1.48
CTSB-217ENST00000530296 SPRR2AP35326 72 aa5.82□□□□□ -1.48
CTSB-217ENST00000530296 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
CTSB-217ENST00000530296 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
CTSB-217ENST00000530296 KRTAP2-2Q9BYT5 123 aa5.79□□□□□ -1.48
CTSB-217ENST00000530296 KRTAP2-1Q9BYU5 128 aa5.79□□□□□ -1.48
CTSB-217ENST00000530296 A0A0D9SG42 100 aa5.78□□□□□ -1.48
CTSB-217ENST00000530296 CAMK2N1Q7Z7J9 78 aa5.78□□□□□ -1.48
CTSB-217ENST00000530296 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
CTSB-217ENST00000530296 SPINT4Q6UDR6 99 aa5.72□□□□□ -1.49
CTSB-217ENST00000530296 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
CTSB-217ENST00000530296 UQCR11O14957 56 aa5.68□□□□□ -1.5
CTSB-217ENST00000530296 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
CTSB-217ENST00000530296 PSPHP1O15172 72 aa5.67□□□□□ -1.5
CTSB-217ENST00000530296 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
CTSB-217ENST00000530296 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
CTSB-217ENST00000530296 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
CTSB-217ENST00000530296 SPRR2DP22532 72 aa5.64□□□□□ -1.51
CTSB-217ENST00000530296 A8MU10 97 aa5.63□□□□□ -1.51
CTSB-217ENST00000530296 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
CTSB-217ENST00000530296 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
CTSB-217ENST00000530296 A6NED7 52 aa5.55□□□□□ -1.52
CTSB-217ENST00000530296 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
CTSB-217ENST00000530296 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
CTSB-217ENST00000530296 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms