RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 SNURFQ9Y675 71 aa8.28□□□□□ -1.08
CLP1-204ENST00000529773 COX7CP15954 63 aa8.27□□□□□ -1.09
CLP1-204ENST00000529773 MT1FP04733 61 aa8.26□□□□□ -1.09
CLP1-204ENST00000529773 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
CLP1-204ENST00000529773 KRTAP9-2Q9BYQ4 174 aa8.24□□□□□ -1.09
CLP1-204ENST00000529773 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
CLP1-204ENST00000529773 NDUFC1O43677 76 aa8.16□□□□□ -1.1
CLP1-204ENST00000529773 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
CLP1-204ENST00000529773 ANAPC13Q9BS18 74 aa8.16□□□□□ -1.1
CLP1-204ENST00000529773 KRTAP9-3Q9BYQ3 159 aa8.14□□□□□ -1.11
CLP1-204ENST00000529773 ACYP2P14621 99 aa8.11□□□□□ -1.11
CLP1-204ENST00000529773 H0YAA0 97 aa8.08□□□□□ -1.12
CLP1-204ENST00000529773 CYSTM1Q9H1C7 97 aa8.08□□□□□ -1.12
CLP1-204ENST00000529773 H7BZZ5 65 aa8.07□□□□□ -1.12
CLP1-204ENST00000529773 CCDC179H3BU77 68 aa7.99□□□□□ -1.13
CLP1-204ENST00000529773 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
CLP1-204ENST00000529773 USH2AO75445 5202 aa7.92□□□□□ -1.14
CLP1-204ENST00000529773 CHKB-CPT1BH3BT56 60 aa7.92□□□□□ -1.14
CLP1-204ENST00000529773 KRTAP19-1Q8IUB9 90 aa7.92□□□□□ -1.14
CLP1-204ENST00000529773 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
CLP1-204ENST00000529773 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
CLP1-204ENST00000529773 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
CLP1-204ENST00000529773 COA5Q86WW8 74 aa7.89□□□□□ -1.15
CLP1-204ENST00000529773 FSIP2Q5CZC0 6907 aa7.88□□□□□ -1.15
CLP1-204ENST00000529773 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
CLP1-204ENST00000529773 KRTAP9-6A0A140TA67 174 aa7.82□□□□□ -1.16
CLP1-204ENST00000529773 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
CLP1-204ENST00000529773 P0C880 135 aa7.8□□□□□ -1.16
CLP1-204ENST00000529773 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
CLP1-204ENST00000529773 SSPOA2VEC9 5147 aa7.78□□□□□ -1.16
CLP1-204ENST00000529773 TMEM258P61165 79 aa7.76□□□□□ -1.17
CLP1-204ENST00000529773 MT1BP07438 61 aa7.71□□□□□ -1.18
CLP1-204ENST00000529773 Q5VV11 94 aa7.69□□□□□ -1.18
CLP1-204ENST00000529773 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
CLP1-204ENST00000529773 R4GN34 69 aa7.67□□□□□ -1.18
CLP1-204ENST00000529773 M0QZ58 72 aa7.62□□□□□ -1.19
CLP1-204ENST00000529773 SEC61GP60059 68 aa7.54□□□□□ -1.2
CLP1-204ENST00000529773 PCP4P48539 62 aa7.52□□□□□ -1.21
CLP1-204ENST00000529773 SERP1Q9Y6X1 66 aa7.52□□□□□ -1.21
CLP1-204ENST00000529773 FCGBPQ9Y6R7 5405 aaPredicted RBP7.52□□□□□ -1.21
CLP1-204ENST00000529773 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
CLP1-204ENST00000529773 A0A1B0GU69 56 aa7.45□□□□□ -1.22
CLP1-204ENST00000529773 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
CLP1-204ENST00000529773 A6NN06 94 aa7.43□□□□□ -1.22
CLP1-204ENST00000529773 LINC01554Q52M75 96 aa7.43□□□□□ -1.22
CLP1-204ENST00000529773 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
CLP1-204ENST00000529773 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
CLP1-204ENST00000529773 A0A1B0GU33 70 aa7.4□□□□□ -1.22
CLP1-204ENST00000529773 PRR15LQ9BU68 103 aa7.36□□□□□ -1.23
CLP1-204ENST00000529773 MT1XP80297 61 aa7.34□□□□□ -1.23
CLP1-204ENST00000529773 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
CLP1-204ENST00000529773 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
CLP1-204ENST00000529773 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
CLP1-204ENST00000529773 RPS28P62857 69 aaKnown RBP7.24□□□□□ -1.25
CLP1-204ENST00000529773 V9GYY9 64 aa7.24□□□□□ -1.25
CLP1-204ENST00000529773 Q1T7F1 81 aa7.23□□□□□ -1.25
CLP1-204ENST00000529773 SMIM26A0A096LP01 95 aa7.21□□□□□ -1.26
CLP1-204ENST00000529773 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
CLP1-204ENST00000529773 A0A0D9SG42 100 aa7.2□□□□□ -1.26
CLP1-204ENST00000529773 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
CLP1-204ENST00000529773 UQCR11O14957 56 aa7.13□□□□□ -1.27
CLP1-204ENST00000529773 A8MU10 97 aa7.12□□□□□ -1.27
CLP1-204ENST00000529773 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
CLP1-204ENST00000529773 KRTAP9-7A8MTY7 169 aa7.08□□□□□ -1.28
CLP1-204ENST00000529773 CAMK2N1Q7Z7J9 78 aa7.08□□□□□ -1.28
CLP1-204ENST00000529773 PSPHP1O15172 72 aa7.07□□□□□ -1.28
CLP1-204ENST00000529773 SPINT4Q6UDR6 99 aa7.07□□□□□ -1.28
CLP1-204ENST00000529773 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
CLP1-204ENST00000529773 MIR22HGQ0VDD5 57 aa7□□□□□ -1.29
CLP1-204ENST00000529773 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
CLP1-204ENST00000529773 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
CLP1-204ENST00000529773 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
CLP1-204ENST00000529773 KRTAP5-9P26371 169 aa6.9□□□□□ -1.3
CLP1-204ENST00000529773 A6NED7 52 aa6.86□□□□□ -1.31
CLP1-204ENST00000529773 KMT2DO14686 5537 aa6.86□□□□□ -1.31
CLP1-204ENST00000529773 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
CLP1-204ENST00000529773 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
CLP1-204ENST00000529773 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
CLP1-204ENST00000529773 C10orf95Q9H7T3 257 aa6.8□□□□□ -1.32
CLP1-204ENST00000529773 K7ERS5 55 aa6.76□□□□□ -1.33
CLP1-204ENST00000529773 CDC42SE1Q9NRR8 79 aa6.7□□□□□ -1.34
CLP1-204ENST00000529773 SPRR2FQ96RM1 72 aa6.69□□□□□ -1.34
CLP1-204ENST00000529773 TNP1P09430 55 aa6.68□□□□□ -1.34
CLP1-204ENST00000529773 MUC12Q9UKN1 5478 aa6.68□□□□□ -1.34
CLP1-204ENST00000529773 NEBP20929 6669 aa6.6□□□□□ -1.35
CLP1-204ENST00000529773 LOC100996750A0A140TA64 210 aa6.58□□□□□ -1.36
CLP1-204ENST00000529773 KRTAP4-6Q9BYQ5 205 aa6.58□□□□□ -1.36
CLP1-204ENST00000529773 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
CLP1-204ENST00000529773 MDN1Q9NU22 5596 aa6.56□□□□□ -1.36
CLP1-204ENST00000529773 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
CLP1-204ENST00000529773 LCE1AQ5T7P2 110 aa6.52□□□□□ -1.37
CLP1-204ENST00000529773 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
CLP1-204ENST00000529773 SPRR2EP22531 72 aa6.49□□□□□ -1.37
CLP1-204ENST00000529773 SPRR2BP35325 72 aa6.49□□□□□ -1.37
CLP1-204ENST00000529773 SPRR2AP35326 72 aa6.49□□□□□ -1.37
CLP1-204ENST00000529773 H3BS24 57 aa6.48□□□□□ -1.37
CLP1-204ENST00000529773 MT1EP04732 61 aa6.47□□□□□ -1.37
CLP1-204ENST00000529773 KRTAP19-5Q3LI72 72 aa6.45□□□□□ -1.38
CLP1-204ENST00000529773 ROMO1P60602 79 aa6.41□□□□□ -1.38
CLP1-204ENST00000529773 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms