RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 SPTSSBQ8NFR3 76 aa8.23□□□□□ -1.09
PACS1-209ENST00000529757 LCA10Q71F78 164 aa8.22□□□□□ -1.09
PACS1-209ENST00000529757 RNF213Q63HN8 5207 aa8.22□□□□□ -1.09
PACS1-209ENST00000529757 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
PACS1-209ENST00000529757 Q1T7F1 81 aa8.13□□□□□ -1.11
PACS1-209ENST00000529757 V9GYY9 64 aa8.12□□□□□ -1.11
PACS1-209ENST00000529757 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
PACS1-209ENST00000529757 LINC01558Q9Y6Z2 57 aa8.09□□□□□ -1.11
PACS1-209ENST00000529757 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
PACS1-209ENST00000529757 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
PACS1-209ENST00000529757 PRR15LQ9BU68 103 aa8.02□□□□□ -1.13
PACS1-209ENST00000529757 A0A1B0GU69 56 aa8□□□□□ -1.13
PACS1-209ENST00000529757 PSPHP1O15172 72 aa7.99□□□□□ -1.13
PACS1-209ENST00000529757 SEC61GP60059 68 aa7.98□□□□□ -1.13
PACS1-209ENST00000529757 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
PACS1-209ENST00000529757 MT1HP80294 61 aa7.95□□□□□ -1.14
PACS1-209ENST00000529757 Q5VV11 94 aa7.92□□□□□ -1.14
PACS1-209ENST00000529757 H0YAA0 97 aa7.89□□□□□ -1.15
PACS1-209ENST00000529757 M0R2T5 61 aa7.88□□□□□ -1.15
PACS1-209ENST00000529757 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
PACS1-209ENST00000529757 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
PACS1-209ENST00000529757 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
PACS1-209ENST00000529757 P0C880 135 aa7.81□□□□□ -1.16
PACS1-209ENST00000529757 SVIPQ8NHG7 77 aa7.81□□□□□ -1.16
PACS1-209ENST00000529757 A0A1B0GU33 70 aa7.78□□□□□ -1.16
PACS1-209ENST00000529757 A6NED7 52 aa7.76□□□□□ -1.17
PACS1-209ENST00000529757 UQCR11O14957 56 aa7.74□□□□□ -1.17
PACS1-209ENST00000529757 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
PACS1-209ENST00000529757 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.18
PACS1-209ENST00000529757 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
PACS1-209ENST00000529757 KRTAP9-8Q9BYQ0 159 aa7.63□□□□□ -1.19
PACS1-209ENST00000529757 M0QZ58 72 aa7.63□□□□□ -1.19
PACS1-209ENST00000529757 LORP23490 312 aaPredicted RBP7.63□□□□□ -1.19
PACS1-209ENST00000529757 KRTAP13-4Q3LI77 160 aa7.63□□□□□ -1.19
PACS1-209ENST00000529757 MT2AP02795 61 aa7.62□□□□□ -1.19
PACS1-209ENST00000529757 BRK1Q8WUW1 75 aa7.62□□□□□ -1.19
PACS1-209ENST00000529757 R4GN34 69 aa7.61□□□□□ -1.19
PACS1-209ENST00000529757 CDC42SE1Q9NRR8 79 aa7.6□□□□□ -1.19
PACS1-209ENST00000529757 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
PACS1-209ENST00000529757 MT1FP04733 61 aa7.57□□□□□ -1.2
PACS1-209ENST00000529757 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
PACS1-209ENST00000529757 A8MU10 97 aa7.54□□□□□ -1.2
PACS1-209ENST00000529757 A0A0D9SG42 100 aa7.49□□□□□ -1.21
PACS1-209ENST00000529757 PRO0628Q9UI54 55 aa7.48□□□□□ -1.21
PACS1-209ENST00000529757 LINC01554Q52M75 96 aa7.46□□□□□ -1.22
PACS1-209ENST00000529757 SPRR2GQ9BYE4 73 aa7.43□□□□□ -1.22
PACS1-209ENST00000529757 KRTAP19-1Q8IUB9 90 aa7.41□□□□□ -1.22
PACS1-209ENST00000529757 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
PACS1-209ENST00000529757 K7ERS5 55 aa7.34□□□□□ -1.23
PACS1-209ENST00000529757 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
PACS1-209ENST00000529757 A6NN06 94 aa7.33□□□□□ -1.24
PACS1-209ENST00000529757 SPINT4Q6UDR6 99 aa7.32□□□□□ -1.24
PACS1-209ENST00000529757 KRTAP12-2P59991 146 aa7.32□□□□□ -1.24
PACS1-209ENST00000529757 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
PACS1-209ENST00000529757 PMAIP1Q13794 54 aa7.19□□□□□ -1.26
PACS1-209ENST00000529757 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
PACS1-209ENST00000529757 LCE2BO14633 110 aa7.16□□□□□ -1.26
PACS1-209ENST00000529757 MT1BP07438 61 aa7.15□□□□□ -1.27
PACS1-209ENST00000529757 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
PACS1-209ENST00000529757 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
PACS1-209ENST00000529757 ROMO1P60602 79 aa7□□□□□ -1.29
PACS1-209ENST00000529757 USH2AO75445 5202 aa6.96□□□□□ -1.29
PACS1-209ENST00000529757 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
PACS1-209ENST00000529757 MT1XP80297 61 aa6.9□□□□□ -1.3
PACS1-209ENST00000529757 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
PACS1-209ENST00000529757 KTN1-AS1Q86SY8 53 aa6.87□□□□□ -1.31
PACS1-209ENST00000529757 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
PACS1-209ENST00000529757 SSPOA2VEC9 5147 aa6.78□□□□□ -1.32
PACS1-209ENST00000529757 TNP1P09430 55 aa6.77□□□□□ -1.33
PACS1-209ENST00000529757 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
PACS1-209ENST00000529757 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
PACS1-209ENST00000529757 KRTAP19-6Q3LI70 58 aa6.76□□□□□ -1.33
PACS1-209ENST00000529757 PRAC1Q96KF2 57 aa6.74□□□□□ -1.33
PACS1-209ENST00000529757 FSIP2Q5CZC0 6907 aa6.66□□□□□ -1.34
PACS1-209ENST00000529757 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
PACS1-209ENST00000529757 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
PACS1-209ENST00000529757 KRTAP23-1A1A580 65 aa6.53□□□□□ -1.36
PACS1-209ENST00000529757 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
PACS1-209ENST00000529757 CRCT1Q9UGL9 99 aa6.52□□□□□ -1.37
PACS1-209ENST00000529757 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
PACS1-209ENST00000529757 FCGBPQ9Y6R7 5405 aaPredicted RBP6.48□□□□□ -1.37
PACS1-209ENST00000529757 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
PACS1-209ENST00000529757 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
PACS1-209ENST00000529757 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
PACS1-209ENST00000529757 KMT2DO14686 5537 aa6.31□□□□□ -1.4
PACS1-209ENST00000529757 KRTAP9-6A0A140TA67 174 aa6.26□□□□□ -1.41
PACS1-209ENST00000529757 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
PACS1-209ENST00000529757 KRTAP19-5Q3LI72 72 aa6.22□□□□□ -1.41
PACS1-209ENST00000529757 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.42
PACS1-209ENST00000529757 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
PACS1-209ENST00000529757 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
PACS1-209ENST00000529757 MT1EP04732 61 aa6.06□□□□□ -1.44
PACS1-209ENST00000529757 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
PACS1-209ENST00000529757 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
PACS1-209ENST00000529757 KRTAP5-9P26371 169 aa5.95□□□□□ -1.46
PACS1-209ENST00000529757 MT1LQ93083 61 aa5.92□□□□□ -1.46
PACS1-209ENST00000529757 SYNE2Q8WXH0 6885 aaKnown RBP5.91□□□□□ -1.46
PACS1-209ENST00000529757 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
PACS1-209ENST00000529757 KRTAP6-3Q3LI67 103 aa5.88□□□□□ -1.47
PACS1-209ENST00000529757 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms