RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
CHRNA6-202ENST00000529467 LINC00313P59037 77 aa3.34□□□□□ -1.87
CHRNA6-202ENST00000529467 DEFB116Q30KQ4 102 aa3.34□□□□□ -1.87
CHRNA6-202ENST00000529467 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
CHRNA6-202ENST00000529467 C9orf92A6NGG3 77 aa3.33□□□□□ -1.88
CHRNA6-202ENST00000529467 IGHV6-1A0A0B4J1U7 121 aa3.32□□□□□ -1.88
CHRNA6-202ENST00000529467 MP68P56378 58 aa3.32□□□□□ -1.88
CHRNA6-202ENST00000529467 Q8N9P0 234 aaPredicted RBP3.32□□□□□ -1.88
CHRNA6-202ENST00000529467 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
CHRNA6-202ENST00000529467 WFDC13Q8IUB5 93 aa3.31□□□□□ -1.88
CHRNA6-202ENST00000529467 TRAV22A0A0B4J277 110 aa3.3□□□□□ -1.88
CHRNA6-202ENST00000529467 M0R2T5 61 aa3.29□□□□□ -1.88
CHRNA6-202ENST00000529467 C20orf197Q8N268 126 aa3.29□□□□□ -1.88
CHRNA6-202ENST00000529467 LOC101927531A0A1B0GV80 90 aa3.27□□□□□ -1.89
CHRNA6-202ENST00000529467 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
CHRNA6-202ENST00000529467 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
CHRNA6-202ENST00000529467 COX6B2Q6YFQ2 88 aa3.27□□□□□ -1.89
CHRNA6-202ENST00000529467 ZCCHC13Q8WW36 166 aaKnown RBP3.27□□□□□ -1.89
CHRNA6-202ENST00000529467 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
CHRNA6-202ENST00000529467 H0Y9P7 68 aa3.26□□□□□ -1.89
CHRNA6-202ENST00000529467 H7BZZ5 65 aa3.26□□□□□ -1.89
CHRNA6-202ENST00000529467 NDUFS5O43920 106 aa3.26□□□□□ -1.89
CHRNA6-202ENST00000529467 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
CHRNA6-202ENST00000529467 C20orf166-AS1Q96NR2 134 aa3.26□□□□□ -1.89
CHRNA6-202ENST00000529467 NOTCH2NLQ7Z3S9 236 aa3.25□□□□□ -1.89
CHRNA6-202ENST00000529467 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
CHRNA6-202ENST00000529467 A8MUU9 505 aa3.24□□□□□ -1.89
CHRNA6-202ENST00000529467 Q75L30 129 aa3.24□□□□□ -1.89
CHRNA6-202ENST00000529467 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
CHRNA6-202ENST00000529467 C1orf64Q8NEQ6 169 aa3.24□□□□□ -1.89
CHRNA6-202ENST00000529467 LINC00208Q96KT6 92 aa3.24□□□□□ -1.89
CHRNA6-202ENST00000529467 KRTAP15-1Q3LI76 137 aa3.22□□□□□ -1.89
CHRNA6-202ENST00000529467 SNURFQ9Y675 71 aa3.22□□□□□ -1.89
CHRNA6-202ENST00000529467 CYP4F30PQ9H0H9 118 aa3.21□□□□□ -1.9
CHRNA6-202ENST00000529467 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
CHRNA6-202ENST00000529467 USH2AO75445 5202 aa3.19□□□□□ -1.9
CHRNA6-202ENST00000529467 IGKV2-30P06310 120 aa3.19□□□□□ -1.9
CHRNA6-202ENST00000529467 Q1T7F1 81 aa3.19□□□□□ -1.9
CHRNA6-202ENST00000529467 Q5W150 140 aa3.19□□□□□ -1.9
CHRNA6-202ENST00000529467 C7orf65Q6ZTY9 151 aa3.19□□□□□ -1.9
CHRNA6-202ENST00000529467 KRTAP23-1A1A580 65 aa3.18□□□□□ -1.9
CHRNA6-202ENST00000529467 ATP11AUNQ6ZP68 121 aa3.17□□□□□ -1.9
CHRNA6-202ENST00000529467 LCA10Q71F78 164 aa3.17□□□□□ -1.9
CHRNA6-202ENST00000529467 A8MUN3 132 aa3.16□□□□□ -1.9
CHRNA6-202ENST00000529467 MPLKIPQ8TAP9 179 aa3.16□□□□□ -1.9
CHRNA6-202ENST00000529467 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.91
CHRNA6-202ENST00000529467 MT2AP02795 61 aa3.14□□□□□ -1.91
CHRNA6-202ENST00000529467 ACYP2P14621 99 aa3.14□□□□□ -1.91
CHRNA6-202ENST00000529467 HRES1P13985 223 aa3.12□□□□□ -1.91
CHRNA6-202ENST00000529467 DMAC1Q96GE9 116 aa3.12□□□□□ -1.91
CHRNA6-202ENST00000529467 IGKV2D-30A0A075B6S6 120 aa3.11□□□□□ -1.91
CHRNA6-202ENST00000529467 MT1FP04733 61 aa3.11□□□□□ -1.91
CHRNA6-202ENST00000529467 SPINK7P58062 85 aa3.1□□□□□ -1.91
CHRNA6-202ENST00000529467 A6NN06 94 aa3.09□□□□□ -1.91
CHRNA6-202ENST00000529467 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
CHRNA6-202ENST00000529467 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
CHRNA6-202ENST00000529467 COA5Q86WW8 74 aa3.07□□□□□ -1.92
CHRNA6-202ENST00000529467 SPTSSBQ8NFR3 76 aa3.07□□□□□ -1.92
CHRNA6-202ENST00000529467 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
CHRNA6-202ENST00000529467 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
CHRNA6-202ENST00000529467 CHKB-CPT1BH3BT56 60 aa3.04□□□□□ -1.92
CHRNA6-202ENST00000529467 PSPHP1O15172 72 aa3.04□□□□□ -1.92
CHRNA6-202ENST00000529467 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
CHRNA6-202ENST00000529467 Q5VV11 94 aa3.03□□□□□ -1.92
CHRNA6-202ENST00000529467 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
CHRNA6-202ENST00000529467 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
CHRNA6-202ENST00000529467 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
CHRNA6-202ENST00000529467 A0A0A0MQY5 61 aa3□□□□□ -1.93
CHRNA6-202ENST00000529467 A6NED7 52 aa2.99□□□□□ -1.93
CHRNA6-202ENST00000529467 MACF1Q9UPN3 7388 aaKnown RBP2.99□□□□□ -1.93
CHRNA6-202ENST00000529467 H1FX-AS1Q4G0G2 97 aa2.98□□□□□ -1.93
CHRNA6-202ENST00000529467 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
CHRNA6-202ENST00000529467 A8MU10 97 aa2.95□□□□□ -1.94
CHRNA6-202ENST00000529467 S4R3F8 94 aa2.94□□□□□ -1.94
CHRNA6-202ENST00000529467 A0A1B0GU69 56 aa2.93□□□□□ -1.94
CHRNA6-202ENST00000529467 H0YAA0 97 aa2.92□□□□□ -1.94
CHRNA6-202ENST00000529467 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
CHRNA6-202ENST00000529467 CSAG1Q6PB30 78 aa2.91□□□□□ -1.94
CHRNA6-202ENST00000529467 UQCR11O14957 56 aa2.89□□□□□ -1.95
CHRNA6-202ENST00000529467 PRAC1Q96KF2 57 aa2.87□□□□□ -1.95
CHRNA6-202ENST00000529467 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
CHRNA6-202ENST00000529467 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
CHRNA6-202ENST00000529467 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
CHRNA6-202ENST00000529467 NEBP20929 6669 aa2.85□□□□□ -1.95
CHRNA6-202ENST00000529467 A0A1B0GU33 70 aa2.83□□□□□ -1.96
CHRNA6-202ENST00000529467 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
CHRNA6-202ENST00000529467 M0QZ58 72 aa2.82□□□□□ -1.96
CHRNA6-202ENST00000529467 MT1BP07438 61 aa2.82□□□□□ -1.96
CHRNA6-202ENST00000529467 ROMO1P60602 79 aa2.82□□□□□ -1.96
CHRNA6-202ENST00000529467 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
CHRNA6-202ENST00000529467 MIR22HGQ0VDD5 57 aa2.81□□□□□ -1.96
CHRNA6-202ENST00000529467 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
CHRNA6-202ENST00000529467 CRIPTQ9P021 101 aa2.8□□□□□ -1.96
CHRNA6-202ENST00000529467 KRTAP19-8Q3LI54 63 aa2.79□□□□□ -1.96
CHRNA6-202ENST00000529467 KRTAP10-5P60370 271 aa2.78□□□□□ -1.96
CHRNA6-202ENST00000529467 SPRR2GQ9BYE4 73 aa2.77□□□□□ -1.97
CHRNA6-202ENST00000529467 KRTAP10-7P60409 375 aaPredicted RBP2.76□□□□□ -1.97
CHRNA6-202ENST00000529467 K7ERS5 55 aa2.75□□□□□ -1.97
CHRNA6-202ENST00000529467 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
CHRNA6-202ENST00000529467 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms