RNA–Protein interactions for RNA: ENST00000529189.5

LTBP3-212, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-212ENST00000529189 ACYP2P14621 99 aa12.43□□□□□ -0.42
LTBP3-212ENST00000529189 TPRXLQ17RH7 258 aa12.41□□□□□ -0.42
LTBP3-212ENST00000529189 LPAP08519 4548 aa12.38□□□□□ -0.43
LTBP3-212ENST00000529189 XP32Q5T750 250 aa12.35□□□□□ -0.43
LTBP3-212ENST00000529189 SPINK7P58062 85 aa12.33□□□□□ -0.44
LTBP3-212ENST00000529189 HMCN2Q8NDA2 5059 aa12.31□□□□□ -0.44
LTBP3-212ENST00000529189 RPL37P61927 97 aaKnown RBP12.31□□□□□ -0.44
LTBP3-212ENST00000529189 LRP2P98164 4655 aa12.23□□□□□ -0.45
LTBP3-212ENST00000529189 KRTAP3-1Q9BYR8 98 aa12.04□□□□□ -0.48
LTBP3-212ENST00000529189 COX6B2Q6YFQ2 88 aa12.03□□□□□ -0.48
LTBP3-212ENST00000529189 SPATA8Q6RVD6 105 aa12□□□□□ -0.49
LTBP3-212ENST00000529189 SEC61BP60468 96 aaKnown RBP11.99□□□□□ -0.49
LTBP3-212ENST00000529189 A0A1B0GU69 56 aa11.97□□□□□ -0.49
LTBP3-212ENST00000529189 MUC17Q685J3 4493 aa11.94□□□□□ -0.5
LTBP3-212ENST00000529189 PRAC1Q96KF2 57 aa11.87□□□□□ -0.51
LTBP3-212ENST00000529189 UQCR11O14957 56 aa11.85□□□□□ -0.51
LTBP3-212ENST00000529189 MIR22HGQ0VDD5 57 aa11.85□□□□□ -0.51
LTBP3-212ENST00000529189 UBR4Q5T4S7 5183 aa11.81□□□□□ -0.52
LTBP3-212ENST00000529189 KRTAP4-1Q9BYQ7 146 aa11.8□□□□□ -0.52
LTBP3-212ENST00000529189 ADM2Q7Z4H4 148 aa11.79□□□□□ -0.52
LTBP3-212ENST00000529189 LINC01554Q52M75 96 aa11.78□□□□□ -0.52
LTBP3-212ENST00000529189 MUC2Q02817 5179 aa11.67□□□□□ -0.54
LTBP3-212ENST00000529189 H1FX-AS1Q4G0G2 97 aa11.65□□□□□ -0.55
LTBP3-212ENST00000529189 S4R3F8 94 aa11.65□□□□□ -0.55
LTBP3-212ENST00000529189 RNF213Q63HN8 5207 aa11.64□□□□□ -0.55
LTBP3-212ENST00000529189 KRTAP3-3Q9BYR6 98 aa11.59□□□□□ -0.55
LTBP3-212ENST00000529189 CSAG1Q6PB30 78 aa11.52□□□□□ -0.57
LTBP3-212ENST00000529189 KRTAP19-2Q3LHN2 52 aa11.41□□□□□ -0.58
LTBP3-212ENST00000529189 A0A1B0GU33 70 aa11.4□□□□□ -0.58
LTBP3-212ENST00000529189 H0YAA0 97 aa11.34□□□□□ -0.59
LTBP3-212ENST00000529189 H3BS24 57 aa11.3□□□□□ -0.6
LTBP3-212ENST00000529189 KRTAP10-6P60371 365 aaPredicted RBP11.28□□□□□ -0.6
LTBP3-212ENST00000529189 KRTAP3-2Q9BYR7 98 aa11.27□□□□□ -0.61
LTBP3-212ENST00000529189 LCE2CQ5TA81 110 aa11.27□□□□□ -0.61
LTBP3-212ENST00000529189 KRTAP25-1Q3LHN0 102 aa11.24□□□□□ -0.61
LTBP3-212ENST00000529189 FAT4Q6V0I7 4981 aa11.23□□□□□ -0.61
LTBP3-212ENST00000529189 FLGP20930 4061 aaPredicted RBP11.18□□□□□ -0.62
LTBP3-212ENST00000529189 P0C880 135 aa11.16□□□□□ -0.62
LTBP3-212ENST00000529189 MT1HP80294 61 aa11.07□□□□□ -0.64
LTBP3-212ENST00000529189 ROMO1P60602 79 aa11.04□□□□□ -0.64
LTBP3-212ENST00000529189 KRTAP13-4Q3LI77 160 aa11.03□□□□□ -0.64
LTBP3-212ENST00000529189 K7ERS5 55 aa11.02□□□□□ -0.65
LTBP3-212ENST00000529189 M0R2T5 61 aa10.94□□□□□ -0.66
LTBP3-212ENST00000529189 A0A0D9SG42 100 aa10.88□□□□□ -0.67
LTBP3-212ENST00000529189 M0QZ58 72 aa10.88□□□□□ -0.67
LTBP3-212ENST00000529189 LCE2AQ5TA79 106 aaPredicted RBP10.81□□□□□ -0.68
LTBP3-212ENST00000529189 R4GN34 69 aa10.74□□□□□ -0.69
LTBP3-212ENST00000529189 CRIPTQ9P021 101 aa10.71□□□□□ -0.69
LTBP3-212ENST00000529189 LORP23490 312 aaPredicted RBP10.69□□□□□ -0.7
LTBP3-212ENST00000529189 KRTAP12-1P59990 96 aa10.63□□□□□ -0.71
LTBP3-212ENST00000529189 KRTAP12-2P59991 146 aa10.62□□□□□ -0.71
LTBP3-212ENST00000529189 KRTAP9-8Q9BYQ0 159 aa10.6□□□□□ -0.71
LTBP3-212ENST00000529189 SPINT4Q6UDR6 99 aa10.59□□□□□ -0.71
LTBP3-212ENST00000529189 MT2AP02795 61 aa10.56□□□□□ -0.72
LTBP3-212ENST00000529189 MT1FP04733 61 aa10.51□□□□□ -0.73
LTBP3-212ENST00000529189 KRTAP10-10P60014 251 aa10.46□□□□□ -0.74
LTBP3-212ENST00000529189 KRTAP15-1Q3LI76 137 aa10.37□□□□□ -0.75
LTBP3-212ENST00000529189 C10orf95Q9H7T3 257 aa10.33□□□□□ -0.76
LTBP3-212ENST00000529189 KRTAP9-3Q9BYQ3 159 aa10.23□□□□□ -0.77
LTBP3-212ENST00000529189 SPRR2GQ9BYE4 73 aa10.21□□□□□ -0.77
LTBP3-212ENST00000529189 KRTAP19-1Q8IUB9 90 aa10.2□□□□□ -0.78
LTBP3-212ENST00000529189 NDUFAF8A1L188 74 aa10.16□□□□□ -0.78
LTBP3-212ENST00000529189 CAMK2N1Q7Z7J9 78 aa10.12□□□□□ -0.79
LTBP3-212ENST00000529189 LCE2BO14633 110 aa10.01□□□□□ -0.81
LTBP3-212ENST00000529189 PLAC4Q8WY50 150 aa9.97□□□□□ -0.81
LTBP3-212ENST00000529189 KRTAP19-8Q3LI54 63 aa9.95□□□□□ -0.82
LTBP3-212ENST00000529189 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.83
LTBP3-212ENST00000529189 MT1BP07438 61 aa9.87□□□□□ -0.83
LTBP3-212ENST00000529189 USH2AO75445 5202 aa9.84□□□□□ -0.83
LTBP3-212ENST00000529189 KRTAP9-2Q9BYQ4 174 aa9.7□□□□□ -0.86
LTBP3-212ENST00000529189 TNP1P09430 55 aa9.67□□□□□ -0.86
LTBP3-212ENST00000529189 FSIP2Q5CZC0 6907 aa9.65□□□□□ -0.86
LTBP3-212ENST00000529189 PP632Q6XCG6 107 aa9.63□□□□□ -0.87
LTBP3-212ENST00000529189 SSPOA2VEC9 5147 aa9.58□□□□□ -0.88
LTBP3-212ENST00000529189 KRTAP23-1A1A580 65 aa9.52□□□□□ -0.89
LTBP3-212ENST00000529189 MT1XP80297 61 aa9.5□□□□□ -0.89
LTBP3-212ENST00000529189 A0A0A0MQY5 61 aa9.5□□□□□ -0.89
LTBP3-212ENST00000529189 KRTAP10-5P60370 271 aa9.49□□□□□ -0.89
LTBP3-212ENST00000529189 KRTAP19-6Q3LI70 58 aa9.43□□□□□ -0.9
LTBP3-212ENST00000529189 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
LTBP3-212ENST00000529189 LUZP6Q538Z0 58 aa9.34□□□□□ -0.91
LTBP3-212ENST00000529189 CRCT1Q9UGL9 99 aa9.3□□□□□ -0.92
LTBP3-212ENST00000529189 LCE3AQ5TA76 89 aa9.21□□□□□ -0.93
LTBP3-212ENST00000529189 FCGBPQ9Y6R7 5405 aaPredicted RBP9.21□□□□□ -0.94
LTBP3-212ENST00000529189 KRTAP10-7P60409 375 aaPredicted RBP9.15□□□□□ -0.95
LTBP3-212ENST00000529189 KRTAP10-12P60413 245 aa9.13□□□□□ -0.95
LTBP3-212ENST00000529189 SPRR5A0A1B0GTR4 108 aa9.04□□□□□ -0.96
LTBP3-212ENST00000529189 KRTAP9-6A0A140TA67 174 aa9.04□□□□□ -0.96
LTBP3-212ENST00000529189 KRTAP8-1Q8IUC2 63 aa9.01□□□□□ -0.97
LTBP3-212ENST00000529189 KMT2DO14686 5537 aa8.88□□□□□ -0.99
LTBP3-212ENST00000529189 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
LTBP3-212ENST00000529189 KRTAP4-8Q9BYQ9 185 aa8.83□□□□□ -1
LTBP3-212ENST00000529189 MACF1Q9UPN3 7388 aaKnown RBP8.83□□□□□ -1
LTBP3-212ENST00000529189 KRTAP12-3P60328 96 aa8.82□□□□□ -1
LTBP3-212ENST00000529189 KRTAP19-5Q3LI72 72 aa8.68□□□□□ -1.02
LTBP3-212ENST00000529189 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.63□□□□□ -1.03
LTBP3-212ENST00000529189 SYNE2Q8WXH0 6885 aaKnown RBP8.61□□□□□ -1.03
LTBP3-212ENST00000529189 KRTAP19-7Q3SYF9 63 aa8.47□□□□□ -1.05
LTBP3-212ENST00000529189 SPRR2FQ96RM1 72 aa8.39□□□□□ -1.07
LTBP3-212ENST00000529189 INE1O15225 51 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms