RNA–Protein interactions for RNA: ENST00000528900.5

RDX-206, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-206ENST00000528900 A0A1B0GU69 56 aa13.96□□□□□ -0.17
RDX-206ENST00000528900 HERC1Q15751 4861 aa13.96□□□□□ -0.18
RDX-206ENST00000528900 S4R3F8 94 aa13.94□□□□□ -0.18
RDX-206ENST00000528900 HMCN2Q8NDA2 5059 aa13.92□□□□□ -0.18
RDX-206ENST00000528900 KRTAP4-1Q9BYQ7 146 aa13.91□□□□□ -0.18
RDX-206ENST00000528900 LCA10Q71F78 164 aa13.9□□□□□ -0.18
RDX-206ENST00000528900 KRTAP3-3Q9BYR6 98 aa13.85□□□□□ -0.19
RDX-206ENST00000528900 SEC61GP60059 68 aa13.85□□□□□ -0.19
RDX-206ENST00000528900 A6NED7 52 aa13.75□□□□□ -0.21
RDX-206ENST00000528900 BRK1Q8WUW1 75 aa13.74□□□□□ -0.21
RDX-206ENST00000528900 CSAG1Q6PB30 78 aa13.63□□□□□ -0.23
RDX-206ENST00000528900 KRTAP19-2Q3LHN2 52 aa13.61□□□□□ -0.23
RDX-206ENST00000528900 UQCR11O14957 56 aa13.59□□□□□ -0.23
RDX-206ENST00000528900 PRO0628Q9UI54 55 aa13.58□□□□□ -0.24
RDX-206ENST00000528900 CDC42SE1Q9NRR8 79 aa13.56□□□□□ -0.24
RDX-206ENST00000528900 A0A1B0GU33 70 aa13.48□□□□□ -0.25
RDX-206ENST00000528900 SPATA8Q6RVD6 105 aa13.45□□□□□ -0.26
RDX-206ENST00000528900 MIR22HGQ0VDD5 57 aa13.43□□□□□ -0.26
RDX-206ENST00000528900 KRTAP10-6P60371 365 aaPredicted RBP13.43□□□□□ -0.26
RDX-206ENST00000528900 KRTAP3-2Q9BYR7 98 aa13.43□□□□□ -0.26
RDX-206ENST00000528900 A8MU10 97 aa13.41□□□□□ -0.26
RDX-206ENST00000528900 H0YAA0 97 aa13.38□□□□□ -0.27
RDX-206ENST00000528900 MUC2Q02817 5179 aa13.35□□□□□ -0.27
RDX-206ENST00000528900 ADM2Q7Z4H4 148 aa13.34□□□□□ -0.27
RDX-206ENST00000528900 FLGP20930 4061 aaPredicted RBP13.29□□□□□ -0.28
RDX-206ENST00000528900 P0C880 135 aa13.27□□□□□ -0.28
RDX-206ENST00000528900 RNF213Q63HN8 5207 aa13.2□□□□□ -0.3
RDX-206ENST00000528900 LCE2CQ5TA81 110 aa13.2□□□□□ -0.3
RDX-206ENST00000528900 UBR4Q5T4S7 5183 aa13.18□□□□□ -0.3
RDX-206ENST00000528900 KRTAP13-4Q3LI77 160 aa13.06□□□□□ -0.32
RDX-206ENST00000528900 M0QZ58 72 aa13.04□□□□□ -0.32
RDX-206ENST00000528900 PMAIP1Q13794 54 aa13.02□□□□□ -0.33
RDX-206ENST00000528900 MT1HP80294 61 aa12.92□□□□□ -0.34
RDX-206ENST00000528900 A6NN06 94 aa12.9□□□□□ -0.34
RDX-206ENST00000528900 SVIPQ8NHG7 77 aa12.89□□□□□ -0.35
RDX-206ENST00000528900 R4GN34 69 aa12.87□□□□□ -0.35
RDX-206ENST00000528900 A0A0D9SG42 100 aa12.85□□□□□ -0.35
RDX-206ENST00000528900 M0R2T5 61 aa12.85□□□□□ -0.35
RDX-206ENST00000528900 K7ERS5 55 aa12.83□□□□□ -0.35
RDX-206ENST00000528900 FAT4Q6V0I7 4981 aa12.81□□□□□ -0.36
RDX-206ENST00000528900 LORP23490 312 aaPredicted RBP12.78□□□□□ -0.36
RDX-206ENST00000528900 CRIPTQ9P021 101 aa12.74□□□□□ -0.37
RDX-206ENST00000528900 KRTAP12-1P59990 96 aa12.61□□□□□ -0.39
RDX-206ENST00000528900 LINC01554Q52M75 96 aa12.6□□□□□ -0.39
RDX-206ENST00000528900 KRTAP12-2P59991 146 aa12.57□□□□□ -0.4
RDX-206ENST00000528900 SPINT4Q6UDR6 99 aa12.55□□□□□ -0.4
RDX-206ENST00000528900 KTN1-AS1Q86SY8 53 aa12.55□□□□□ -0.4
RDX-206ENST00000528900 KRTAP9-8Q9BYQ0 159 aa12.48□□□□□ -0.41
RDX-206ENST00000528900 MT2AP02795 61 aa12.47□□□□□ -0.41
RDX-206ENST00000528900 KRTAP10-10P60014 251 aa12.39□□□□□ -0.43
RDX-206ENST00000528900 MT1FP04733 61 aa12.39□□□□□ -0.43
RDX-206ENST00000528900 SPRR2GQ9BYE4 73 aa12.37□□□□□ -0.43
RDX-206ENST00000528900 ROMO1P60602 79 aa12.31□□□□□ -0.44
RDX-206ENST00000528900 KRTAP19-1Q8IUB9 90 aa12.27□□□□□ -0.44
RDX-206ENST00000528900 LCE2AQ5TA79 106 aaPredicted RBP12.26□□□□□ -0.45
RDX-206ENST00000528900 PRAC1Q96KF2 57 aa12.11□□□□□ -0.47
RDX-206ENST00000528900 CAMK2N1Q7Z7J9 78 aa12.08□□□□□ -0.48
RDX-206ENST00000528900 PLAC4Q8WY50 150 aa12.03□□□□□ -0.48
RDX-206ENST00000528900 KRTAP9-3Q9BYQ3 159 aa12.03□□□□□ -0.48
RDX-206ENST00000528900 KRTAP19-8Q3LI54 63 aa12.01□□□□□ -0.49
RDX-206ENST00000528900 C10orf95Q9H7T3 257 aa11.91□□□□□ -0.5
RDX-206ENST00000528900 KRTAP25-1Q3LHN0 102 aa11.85□□□□□ -0.51
RDX-206ENST00000528900 MT1BP07438 61 aa11.79□□□□□ -0.52
RDX-206ENST00000528900 LCE2BO14633 110 aa11.63□□□□□ -0.55
RDX-206ENST00000528900 TNP1P09430 55 aa11.56□□□□□ -0.56
RDX-206ENST00000528900 MT1XP80297 61 aa11.46□□□□□ -0.58
RDX-206ENST00000528900 KRTAP10-5P60370 271 aa11.44□□□□□ -0.58
RDX-206ENST00000528900 PRO2289Q9P1D8 64 aa11.38□□□□□ -0.59
RDX-206ENST00000528900 PP632Q6XCG6 107 aa11.37□□□□□ -0.59
RDX-206ENST00000528900 KRTAP23-1A1A580 65 aa11.32□□□□□ -0.6
RDX-206ENST00000528900 USH2AO75445 5202 aa11.23□□□□□ -0.61
RDX-206ENST00000528900 LCE2DQ5TA82 110 aaPredicted RBP11.09□□□□□ -0.63
RDX-206ENST00000528900 KRTAP10-7P60409 375 aaPredicted RBP10.99□□□□□ -0.65
RDX-206ENST00000528900 KRTAP10-12P60413 245 aa10.97□□□□□ -0.65
RDX-206ENST00000528900 LCE3AQ5TA76 89 aa10.97□□□□□ -0.65
RDX-206ENST00000528900 KRTAP19-6Q3LI70 58 aa10.91□□□□□ -0.66
RDX-206ENST00000528900 SSPOA2VEC9 5147 aa10.86□□□□□ -0.67
RDX-206ENST00000528900 KRTAP8-1Q8IUC2 63 aa10.8□□□□□ -0.68
RDX-206ENST00000528900 FSIP2Q5CZC0 6907 aa10.56□□□□□ -0.72
RDX-206ENST00000528900 KRTAP12-3P60328 96 aa10.56□□□□□ -0.72
RDX-206ENST00000528900 KRTAP15-1Q3LI76 137 aa10.52□□□□□ -0.73
RDX-206ENST00000528900 KRTAP4-8A0A0G2JLE6 195 aa10.49□□□□□ -0.73
RDX-206ENST00000528900 KRTAP4-8Q9BYQ9 185 aa10.49□□□□□ -0.73
RDX-206ENST00000528900 KRTAP9-2Q9BYQ4 174 aa10.48□□□□□ -0.73
RDX-206ENST00000528900 KRTAP19-5Q3LI72 72 aa10.4□□□□□ -0.74
RDX-206ENST00000528900 FCGBPQ9Y6R7 5405 aaPredicted RBP10.33□□□□□ -0.76
RDX-206ENST00000528900 KMT2DO14686 5537 aa10.33□□□□□ -0.76
RDX-206ENST00000528900 KRTAP19-7Q3SYF9 63 aa10.22□□□□□ -0.77
RDX-206ENST00000528900 CRCT1Q9UGL9 99 aa10.17□□□□□ -0.78
RDX-206ENST00000528900 SPRR5A0A1B0GTR4 108 aa10.13□□□□□ -0.79
RDX-206ENST00000528900 MT1EP04732 61 aa10.04□□□□□ -0.8
RDX-206ENST00000528900 KRTAP19-4Q3LI73 84 aa9.96□□□□□ -0.81
RDX-206ENST00000528900 LUZP6Q538Z0 58 aa9.91□□□□□ -0.82
RDX-206ENST00000528900 LCE3CQ5T5A8 94 aa9.88□□□□□ -0.83
RDX-206ENST00000528900 MT1LQ93083 61 aa9.87□□□□□ -0.83
RDX-206ENST00000528900 KRTAP9-6A0A140TA67 174 aa9.82□□□□□ -0.84
RDX-206ENST00000528900 MACF1Q9UPN3 7388 aaKnown RBP9.79□□□□□ -0.84
RDX-206ENST00000528900 NDUFAF8A1L188 74 aa9.77□□□□□ -0.85
RDX-206ENST00000528900 SPRR2FQ96RM1 72 aa9.69□□□□□ -0.86
RDX-206ENST00000528900 KRTAP19-3Q7Z4W3 81 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms