RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 LINC00304Q8N9R0 145 aa5.67□□□□□ -1.5
MSRA-210ENST00000528246 C20orf166-AS1Q96NR2 134 aa5.66□□□□□ -1.5
MSRA-210ENST00000528246 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
MSRA-210ENST00000528246 A8MUU9 505 aa5.65□□□□□ -1.51
MSRA-210ENST00000528246 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
MSRA-210ENST00000528246 Q8N1X5 172 aa5.62□□□□□ -1.51
MSRA-210ENST00000528246 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
MSRA-210ENST00000528246 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
MSRA-210ENST00000528246 FAT1Q14517 4588 aa5.6□□□□□ -1.51
MSRA-210ENST00000528246 VPS13BQ7Z7G8 4022 aa5.6□□□□□ -1.51
MSRA-210ENST00000528246 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
MSRA-210ENST00000528246 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
MSRA-210ENST00000528246 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
MSRA-210ENST00000528246 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
MSRA-210ENST00000528246 SMR3BP02814 79 aaPredicted RBP5.54□□□□□ -1.52
MSRA-210ENST00000528246 PRAC1Q96KF2 57 aa5.54□□□□□ -1.52
MSRA-210ENST00000528246 Q5VSD8 79 aa5.54□□□□□ -1.52
MSRA-210ENST00000528246 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
MSRA-210ENST00000528246 A0A1B0GU33 70 aa5.51□□□□□ -1.53
MSRA-210ENST00000528246 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
MSRA-210ENST00000528246 H0YAA0 97 aa5.5□□□□□ -1.53
MSRA-210ENST00000528246 KRTAP3-1Q9BYR8 98 aa5.5□□□□□ -1.53
MSRA-210ENST00000528246 PKHD1L1Q86WI1 4243 aa5.5□□□□□ -1.53
MSRA-210ENST00000528246 KRTAP10-4P60372 401 aaPredicted RBP5.49□□□□□ -1.53
MSRA-210ENST00000528246 H1FX-AS1Q4G0G2 97 aa5.48□□□□□ -1.53
MSRA-210ENST00000528246 COX6B2Q6YFQ2 88 aa5.48□□□□□ -1.53
MSRA-210ENST00000528246 LCE2CQ5TA81 110 aa5.47□□□□□ -1.53
MSRA-210ENST00000528246 HMCN2Q8NDA2 5059 aa5.44□□□□□ -1.54
MSRA-210ENST00000528246 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
MSRA-210ENST00000528246 CSAG1Q6PB30 78 aa5.44□□□□□ -1.54
MSRA-210ENST00000528246 K7ERS5 55 aa5.43□□□□□ -1.54
MSRA-210ENST00000528246 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
MSRA-210ENST00000528246 KRTAP4-12Q9BQ66 201 aa5.4□□□□□ -1.55
MSRA-210ENST00000528246 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
MSRA-210ENST00000528246 KRTAP25-1Q3LHN0 102 aa5.38□□□□□ -1.55
MSRA-210ENST00000528246 FAT3Q8TDW7 4589 aa5.34□□□□□ -1.56
MSRA-210ENST00000528246 RPL37P61927 97 aaKnown RBP5.33□□□□□ -1.56
MSRA-210ENST00000528246 KRTAP10-8P60410 259 aa5.32□□□□□ -1.56
MSRA-210ENST00000528246 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
MSRA-210ENST00000528246 RNF213Q63HN8 5207 aa5.3□□□□□ -1.56
MSRA-210ENST00000528246 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
MSRA-210ENST00000528246 KRTAP10-6P60371 365 aaPredicted RBP5.29□□□□□ -1.56
MSRA-210ENST00000528246 ROMO1P60602 79 aa5.27□□□□□ -1.57
MSRA-210ENST00000528246 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
MSRA-210ENST00000528246 LRP2P98164 4655 aa5.26□□□□□ -1.57
MSRA-210ENST00000528246 S4R3F8 94 aa5.25□□□□□ -1.57
MSRA-210ENST00000528246 TNXBP22105 4242 aa5.25□□□□□ -1.57
MSRA-210ENST00000528246 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
MSRA-210ENST00000528246 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
MSRA-210ENST00000528246 MT1HL1P0DM35 61 aa5.2□□□□□ -1.58
MSRA-210ENST00000528246 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
MSRA-210ENST00000528246 H3BS24 57 aa5.16□□□□□ -1.58
MSRA-210ENST00000528246 M0QZ58 72 aa5.12□□□□□ -1.59
MSRA-210ENST00000528246 P0C880 135 aa5.1□□□□□ -1.59
MSRA-210ENST00000528246 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
MSRA-210ENST00000528246 A0A0D9SG42 100 aa5.07□□□□□ -1.6
MSRA-210ENST00000528246 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
MSRA-210ENST00000528246 KRTAP12-1P59990 96 aa5.04□□□□□ -1.6
MSRA-210ENST00000528246 CRIPTQ9P021 101 aa5.04□□□□□ -1.6
MSRA-210ENST00000528246 LPAP08519 4548 aa5.04□□□□□ -1.6
MSRA-210ENST00000528246 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
MSRA-210ENST00000528246 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
MSRA-210ENST00000528246 MUC2Q02817 5179 aa4.97□□□□□ -1.61
MSRA-210ENST00000528246 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
MSRA-210ENST00000528246 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
MSRA-210ENST00000528246 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.62
MSRA-210ENST00000528246 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
MSRA-210ENST00000528246 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
MSRA-210ENST00000528246 R4GN34 69 aa4.86□□□□□ -1.63
MSRA-210ENST00000528246 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
MSRA-210ENST00000528246 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
MSRA-210ENST00000528246 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
MSRA-210ENST00000528246 MUC17Q685J3 4493 aa4.73□□□□□ -1.65
MSRA-210ENST00000528246 NDUFAF8A1L188 74 aa4.72□□□□□ -1.65
MSRA-210ENST00000528246 KRTAP19-2Q3LHN2 52 aa4.71□□□□□ -1.66
MSRA-210ENST00000528246 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
MSRA-210ENST00000528246 PLAC4Q8WY50 150 aa4.66□□□□□ -1.66
MSRA-210ENST00000528246 KRTAP4-1Q9BYQ7 146 aa4.65□□□□□ -1.67
MSRA-210ENST00000528246 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
MSRA-210ENST00000528246 CAMK2N1Q7Z7J9 78 aa4.59□□□□□ -1.67
MSRA-210ENST00000528246 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
MSRA-210ENST00000528246 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
MSRA-210ENST00000528246 TNP1P09430 55 aa4.52□□□□□ -1.69
MSRA-210ENST00000528246 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
MSRA-210ENST00000528246 MT1HP80294 61 aa4.44□□□□□ -1.7
MSRA-210ENST00000528246 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
MSRA-210ENST00000528246 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
MSRA-210ENST00000528246 M0R2T5 61 aa4.39□□□□□ -1.71
MSRA-210ENST00000528246 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
MSRA-210ENST00000528246 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
MSRA-210ENST00000528246 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
MSRA-210ENST00000528246 USH2AO75445 5202 aa4.25□□□□□ -1.73
MSRA-210ENST00000528246 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
MSRA-210ENST00000528246 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
MSRA-210ENST00000528246 MACF1Q9UPN3 7388 aaKnown RBP4.2□□□□□ -1.74
MSRA-210ENST00000528246 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
MSRA-210ENST00000528246 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
MSRA-210ENST00000528246 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
MSRA-210ENST00000528246 MT2AP02795 61 aa4.18□□□□□ -1.74
MSRA-210ENST00000528246 LCE3AQ5TA76 89 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 498.7 ms