RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 H7BZZ5 65 aa6.94□□□□□ -1.3
CAPN1-212ENST00000527887 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
CAPN1-212ENST00000527887 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
CAPN1-212ENST00000527887 CYP4F30PQ9H0H9 118 aa6.92□□□□□ -1.3
CAPN1-212ENST00000527887 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.91□□□□□ -1.3
CAPN1-212ENST00000527887 TMEM258P61165 79 aa6.91□□□□□ -1.3
CAPN1-212ENST00000527887 LCE2BO14633 110 aa6.9□□□□□ -1.3
CAPN1-212ENST00000527887 CYSTM1Q9H1C7 97 aa6.9□□□□□ -1.3
CAPN1-212ENST00000527887 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
CAPN1-212ENST00000527887 ATP5EP56381 51 aaPredicted RBP6.88□□□□□ -1.31
CAPN1-212ENST00000527887 C7orf65Q6ZTY9 151 aa6.88□□□□□ -1.31
CAPN1-212ENST00000527887 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
CAPN1-212ENST00000527887 KRTAP9-7A8MTY7 169 aa6.86□□□□□ -1.31
CAPN1-212ENST00000527887 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
CAPN1-212ENST00000527887 IGKV2D-30A0A075B6S6 120 aa6.81□□□□□ -1.32
CAPN1-212ENST00000527887 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
CAPN1-212ENST00000527887 A8MUN3 132 aa6.73□□□□□ -1.33
CAPN1-212ENST00000527887 RPS28P62857 69 aaKnown RBP6.73□□□□□ -1.33
CAPN1-212ENST00000527887 KRTAP19-6Q3LI70 58 aa6.72□□□□□ -1.33
CAPN1-212ENST00000527887 DMAC1Q96GE9 116 aa6.7□□□□□ -1.34
CAPN1-212ENST00000527887 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
CAPN1-212ENST00000527887 MACF1Q9UPN3 7388 aaKnown RBP6.7□□□□□ -1.34
CAPN1-212ENST00000527887 ACYP2P14621 99 aa6.69□□□□□ -1.34
CAPN1-212ENST00000527887 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
CAPN1-212ENST00000527887 SYNE2Q8WXH0 6885 aaKnown RBP6.62□□□□□ -1.35
CAPN1-212ENST00000527887 COA5Q86WW8 74 aa6.58□□□□□ -1.36
CAPN1-212ENST00000527887 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
CAPN1-212ENST00000527887 SMIM26A0A096LP01 95 aa6.53□□□□□ -1.36
CAPN1-212ENST00000527887 CHKB-CPT1BH3BT56 60 aa6.51□□□□□ -1.37
CAPN1-212ENST00000527887 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
CAPN1-212ENST00000527887 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
CAPN1-212ENST00000527887 S4R3F8 94 aa6.51□□□□□ -1.37
CAPN1-212ENST00000527887 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
CAPN1-212ENST00000527887 V9GYY9 64 aa6.45□□□□□ -1.38
CAPN1-212ENST00000527887 LCA10Q71F78 164 aa6.44□□□□□ -1.38
CAPN1-212ENST00000527887 Q1T7F1 81 aa6.42□□□□□ -1.38
CAPN1-212ENST00000527887 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
CAPN1-212ENST00000527887 Q5VV11 94 aa6.41□□□□□ -1.38
CAPN1-212ENST00000527887 KRTAP19-8Q3LI54 63 aa6.39□□□□□ -1.39
CAPN1-212ENST00000527887 A6NN06 94 aa6.38□□□□□ -1.39
CAPN1-212ENST00000527887 MT1BP07438 61 aa6.37□□□□□ -1.39
CAPN1-212ENST00000527887 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
CAPN1-212ENST00000527887 KRTAP3-3Q9BYR6 98 aa6.36□□□□□ -1.39
CAPN1-212ENST00000527887 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
CAPN1-212ENST00000527887 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
CAPN1-212ENST00000527887 SEC61GP60059 68 aa6.28□□□□□ -1.4
CAPN1-212ENST00000527887 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
CAPN1-212ENST00000527887 H0YAA0 97 aa6.26□□□□□ -1.41
CAPN1-212ENST00000527887 A0A1B0GU69 56 aa6.25□□□□□ -1.41
CAPN1-212ENST00000527887 NEBP20929 6669 aa6.22□□□□□ -1.41
CAPN1-212ENST00000527887 MUC12Q9UKN1 5478 aa6.19□□□□□ -1.42
CAPN1-212ENST00000527887 PSPHP1O15172 72 aa6.18□□□□□ -1.42
CAPN1-212ENST00000527887 KRTAP5-9P26371 169 aa6.13□□□□□ -1.43
CAPN1-212ENST00000527887 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
CAPN1-212ENST00000527887 UQCR11O14957 56 aa6.1□□□□□ -1.43
CAPN1-212ENST00000527887 ADM2Q7Z4H4 148 aa6.1□□□□□ -1.43
CAPN1-212ENST00000527887 A0A1B0GU33 70 aa6.09□□□□□ -1.43
CAPN1-212ENST00000527887 MDN1Q9NU22 5596 aa6.09□□□□□ -1.44
CAPN1-212ENST00000527887 KMT2DO14686 5537 aa6.09□□□□□ -1.44
CAPN1-212ENST00000527887 PRO2289Q9P1D8 64 aa6.06□□□□□ -1.44
CAPN1-212ENST00000527887 A6NED7 52 aa6.04□□□□□ -1.44
CAPN1-212ENST00000527887 P0C880 135 aa6.04□□□□□ -1.44
CAPN1-212ENST00000527887 M0QZ58 72 aa6.02□□□□□ -1.45
CAPN1-212ENST00000527887 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
CAPN1-212ENST00000527887 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
CAPN1-212ENST00000527887 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
CAPN1-212ENST00000527887 R4GN34 69 aa5.99□□□□□ -1.45
CAPN1-212ENST00000527887 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
CAPN1-212ENST00000527887 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
CAPN1-212ENST00000527887 MT1XP80297 61 aa5.95□□□□□ -1.46
CAPN1-212ENST00000527887 BRK1Q8WUW1 75 aa5.91□□□□□ -1.46
CAPN1-212ENST00000527887 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
CAPN1-212ENST00000527887 KRTAP13-4Q3LI77 160 aa5.88□□□□□ -1.47
CAPN1-212ENST00000527887 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
CAPN1-212ENST00000527887 KRTAP2-3P0C7H8 128 aa5.86□□□□□ -1.47
CAPN1-212ENST00000527887 KRTAP2-4Q9BYR9 128 aa5.86□□□□□ -1.47
CAPN1-212ENST00000527887 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
CAPN1-212ENST00000527887 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
CAPN1-212ENST00000527887 SPRR2EP22531 72 aa5.82□□□□□ -1.48
CAPN1-212ENST00000527887 SPRR2BP35325 72 aa5.82□□□□□ -1.48
CAPN1-212ENST00000527887 SPRR2AP35326 72 aa5.82□□□□□ -1.48
CAPN1-212ENST00000527887 LINC01554Q52M75 96 aa5.8□□□□□ -1.48
CAPN1-212ENST00000527887 K7ERS5 55 aa5.79□□□□□ -1.48
CAPN1-212ENST00000527887 A8MU10 97 aa5.78□□□□□ -1.48
CAPN1-212ENST00000527887 A0A0D9SG42 100 aa5.74□□□□□ -1.49
CAPN1-212ENST00000527887 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
CAPN1-212ENST00000527887 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
CAPN1-212ENST00000527887 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
CAPN1-212ENST00000527887 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
CAPN1-212ENST00000527887 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
CAPN1-212ENST00000527887 KRTAP2-2Q9BYT5 123 aa5.68□□□□□ -1.5
CAPN1-212ENST00000527887 KRTAP2-1Q9BYU5 128 aa5.68□□□□□ -1.5
CAPN1-212ENST00000527887 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
CAPN1-212ENST00000527887 SPINT4Q6UDR6 99 aa5.65□□□□□ -1.5
CAPN1-212ENST00000527887 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
CAPN1-212ENST00000527887 SPRR2DP22532 72 aa5.63□□□□□ -1.51
CAPN1-212ENST00000527887 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
CAPN1-212ENST00000527887 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
CAPN1-212ENST00000527887 ROMO1P60602 79 aa5.49□□□□□ -1.53
CAPN1-212ENST00000527887 KTN1-AS1Q86SY8 53 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms