RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 SEC61GP60059 68 aa5.11□□□□□ -1.59
CAPN1-210ENST00000527699 LINC00472Q9H8W2 130 aa5.11□□□□□ -1.59
CAPN1-210ENST00000527699 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
CAPN1-210ENST00000527699 Q96NJ1 140 aa5.1□□□□□ -1.59
CAPN1-210ENST00000527699 A8MUN3 132 aa5.09□□□□□ -1.59
CAPN1-210ENST00000527699 LCE2BO14633 110 aa5.09□□□□□ -1.59
CAPN1-210ENST00000527699 DEFB116Q30KQ4 102 aa5.09□□□□□ -1.59
CAPN1-210ENST00000527699 Q75L30 129 aa5.09□□□□□ -1.59
CAPN1-210ENST00000527699 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
CAPN1-210ENST00000527699 CHKB-CPT1BH3BT56 60 aa5.08□□□□□ -1.6
CAPN1-210ENST00000527699 Q5VV11 94 aa5.08□□□□□ -1.6
CAPN1-210ENST00000527699 Q8N9P0 234 aaPredicted RBP5.08□□□□□ -1.6
CAPN1-210ENST00000527699 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
CAPN1-210ENST00000527699 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
CAPN1-210ENST00000527699 LOC101927531A0A1B0GV80 90 aa5.07□□□□□ -1.6
CAPN1-210ENST00000527699 COA5Q86WW8 74 aa5.06□□□□□ -1.6
CAPN1-210ENST00000527699 NDUFS5O43920 106 aa5.05□□□□□ -1.6
CAPN1-210ENST00000527699 A6NED7 52 aa5.03□□□□□ -1.6
CAPN1-210ENST00000527699 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
CAPN1-210ENST00000527699 C8orf17Q9NRJ1 99 aa5.03□□□□□ -1.6
CAPN1-210ENST00000527699 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
CAPN1-210ENST00000527699 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
CAPN1-210ENST00000527699 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
CAPN1-210ENST00000527699 A0A1B0GVX0 72 aa5.01□□□□□ -1.61
CAPN1-210ENST00000527699 MT2AP02795 61 aa5.01□□□□□ -1.61
CAPN1-210ENST00000527699 MRPL34Q9BQ48 92 aaKnown RBP5□□□□□ -1.61
CAPN1-210ENST00000527699 A8MUU9 505 aa4.98□□□□□ -1.61
CAPN1-210ENST00000527699 C20orf166-AS1Q96NR2 134 aa4.98□□□□□ -1.61
CAPN1-210ENST00000527699 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
CAPN1-210ENST00000527699 MT1FP04733 61 aa4.97□□□□□ -1.61
CAPN1-210ENST00000527699 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
CAPN1-210ENST00000527699 SPTSSBQ8NFR3 76 aa4.97□□□□□ -1.61
CAPN1-210ENST00000527699 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
CAPN1-210ENST00000527699 KMT2DO14686 5537 aa4.96□□□□□ -1.62
CAPN1-210ENST00000527699 C8orf87E5RJ46 101 aa4.96□□□□□ -1.62
CAPN1-210ENST00000527699 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
CAPN1-210ENST00000527699 IGHV6-1A0A0B4J1U7 121 aa4.95□□□□□ -1.62
CAPN1-210ENST00000527699 ACYP2P14621 99 aa4.93□□□□□ -1.62
CAPN1-210ENST00000527699 C7orf65Q6ZTY9 151 aa4.93□□□□□ -1.62
CAPN1-210ENST00000527699 A6NN06 94 aa4.92□□□□□ -1.62
CAPN1-210ENST00000527699 LCA10Q71F78 164 aa4.92□□□□□ -1.62
CAPN1-210ENST00000527699 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
CAPN1-210ENST00000527699 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
CAPN1-210ENST00000527699 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
CAPN1-210ENST00000527699 HRES1P13985 223 aa4.91□□□□□ -1.62
CAPN1-210ENST00000527699 LINC00313P59037 77 aa4.91□□□□□ -1.62
CAPN1-210ENST00000527699 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.63
CAPN1-210ENST00000527699 DMAC1Q96GE9 116 aa4.86□□□□□ -1.63
CAPN1-210ENST00000527699 A8MU10 97 aa4.85□□□□□ -1.63
CAPN1-210ENST00000527699 MDN1Q9NU22 5596 aa4.84□□□□□ -1.63
CAPN1-210ENST00000527699 A0A1B0GU69 56 aa4.83□□□□□ -1.64
CAPN1-210ENST00000527699 SPINK7P58062 85 aa4.83□□□□□ -1.64
CAPN1-210ENST00000527699 IGKV2-30P06310 120 aa4.79□□□□□ -1.64
CAPN1-210ENST00000527699 Q5W150 140 aa4.79□□□□□ -1.64
CAPN1-210ENST00000527699 UQCR11O14957 56 aa4.78□□□□□ -1.64
CAPN1-210ENST00000527699 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
CAPN1-210ENST00000527699 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
CAPN1-210ENST00000527699 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
CAPN1-210ENST00000527699 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
CAPN1-210ENST00000527699 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
CAPN1-210ENST00000527699 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
CAPN1-210ENST00000527699 LINC01554Q52M75 96 aa4.65□□□□□ -1.67
CAPN1-210ENST00000527699 SPRR2EP22531 72 aa4.63□□□□□ -1.67
CAPN1-210ENST00000527699 SPRR2BP35325 72 aa4.63□□□□□ -1.67
CAPN1-210ENST00000527699 SPRR2AP35326 72 aa4.63□□□□□ -1.67
CAPN1-210ENST00000527699 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
CAPN1-210ENST00000527699 PRAC1Q96KF2 57 aa4.6□□□□□ -1.67
CAPN1-210ENST00000527699 K7ERS5 55 aa4.55□□□□□ -1.68
CAPN1-210ENST00000527699 ADM2Q7Z4H4 148 aa4.54□□□□□ -1.68
CAPN1-210ENST00000527699 CSAG1Q6PB30 78 aa4.52□□□□□ -1.69
CAPN1-210ENST00000527699 A0A1B0GU33 70 aa4.5□□□□□ -1.69
CAPN1-210ENST00000527699 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
CAPN1-210ENST00000527699 MT1BP07438 61 aa4.49□□□□□ -1.69
CAPN1-210ENST00000527699 SPRR2DP22532 72 aa4.49□□□□□ -1.69
CAPN1-210ENST00000527699 H0YAA0 97 aa4.45□□□□□ -1.7
CAPN1-210ENST00000527699 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
CAPN1-210ENST00000527699 S4R3F8 94 aa4.42□□□□□ -1.7
CAPN1-210ENST00000527699 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
CAPN1-210ENST00000527699 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
CAPN1-210ENST00000527699 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
CAPN1-210ENST00000527699 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
CAPN1-210ENST00000527699 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
CAPN1-210ENST00000527699 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
CAPN1-210ENST00000527699 H3BS24 57 aa4.35□□□□□ -1.71
CAPN1-210ENST00000527699 ROMO1P60602 79 aa4.35□□□□□ -1.71
CAPN1-210ENST00000527699 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
CAPN1-210ENST00000527699 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
CAPN1-210ENST00000527699 KRTAP3-3Q9BYR6 98 aa4.29□□□□□ -1.72
CAPN1-210ENST00000527699 SPRR5A0A1B0GTR4 108 aa4.23□□□□□ -1.73
CAPN1-210ENST00000527699 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
CAPN1-210ENST00000527699 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
CAPN1-210ENST00000527699 CRIPTQ9P021 101 aa4.2□□□□□ -1.74
CAPN1-210ENST00000527699 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
CAPN1-210ENST00000527699 A0A0D9SG42 100 aa4.16□□□□□ -1.74
CAPN1-210ENST00000527699 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
CAPN1-210ENST00000527699 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.74
CAPN1-210ENST00000527699 MT1XP80297 61 aa4.15□□□□□ -1.75
CAPN1-210ENST00000527699 M0QZ58 72 aa4.14□□□□□ -1.75
CAPN1-210ENST00000527699 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
CAPN1-210ENST00000527699 KRTAP13-4Q3LI77 160 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms