RNA–Protein interactions for RNA: ENST00000527052.5

NOD2-204, Transcript of nucleotide binding oligomerization domain containing 2, human

TSL 1 (best)

Gene NOD2, Length 338 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOD2-204	ENST00000527052	H1FX-AS1	Q4G0G2	97 aa		7.01	□□□□□ -1.29
NOD2-204	ENST00000527052	C1orf64	Q8NEQ6	169 aa		6.96	□□□□□ -1.3
NOD2-204	ENST00000527052	SYNE2	Q8WXH0	6885 aa	Known RBP	6.95	□□□□□ -1.3
NOD2-204	ENST00000527052	LINC00208	Q96KT6	92 aa		6.94	□□□□□ -1.3
NOD2-204	ENST00000527052	CYP4F30P	Q9H0H9	118 aa		6.94	□□□□□ -1.3
NOD2-204	ENST00000527052	SERP2	Q8N6R1	65 aa		6.93	□□□□□ -1.3
NOD2-204	ENST00000527052	COX7C	P15954	63 aa		6.84	□□□□□ -1.31
NOD2-204	ENST00000527052	ANAPC13	Q9BS18	74 aa		6.84	□□□□□ -1.31
NOD2-204	ENST00000527052	C4orf26	Q17RF5	130 aa		6.82	□□□□□ -1.32
NOD2-204	ENST00000527052		A8MUN3	132 aa		6.8	□□□□□ -1.32
NOD2-204	ENST00000527052	C20orf197	Q8N268	126 aa		6.8	□□□□□ -1.32
NOD2-204	ENST00000527052	KRTAP6-3	Q3LI67	103 aa		6.79	□□□□□ -1.32
NOD2-204	ENST00000527052	KLKP1	Q107X0	134 aa		6.78	□□□□□ -1.32
NOD2-204	ENST00000527052	NDUFC1	O43677	76 aa		6.77	□□□□□ -1.33
NOD2-204	ENST00000527052	SNURF	Q9Y675	71 aa		6.75	□□□□□ -1.33
NOD2-204	ENST00000527052		S4R3F8	94 aa		6.73	□□□□□ -1.33
NOD2-204	ENST00000527052	CSAG1	Q6PB30	78 aa		6.71	□□□□□ -1.34
NOD2-204	ENST00000527052	SPANXA2-OT1	Q8N9U9	137 aa		6.71	□□□□□ -1.34
NOD2-204	ENST00000527052	KRTAP3-1	Q9BYR8	98 aa		6.69	□□□□□ -1.34
NOD2-204	ENST00000527052		Q5VV11	94 aa		6.67	□□□□□ -1.34
NOD2-204	ENST00000527052	DMAC1	Q96GE9	116 aa		6.67	□□□□□ -1.34
NOD2-204	ENST00000527052		A6NN06	94 aa		6.66	□□□□□ -1.34
NOD2-204	ENST00000527052	LCA10	Q71F78	164 aa		6.66	□□□□□ -1.34
NOD2-204	ENST00000527052	ACYP2	P14621	99 aa		6.65	□□□□□ -1.34
NOD2-204	ENST00000527052	SPRR2G	Q9BYE4	73 aa		6.65	□□□□□ -1.34
NOD2-204	ENST00000527052	MT1B	P07438	61 aa		6.64	□□□□□ -1.35
NOD2-204	ENST00000527052	KRTAP19-8	Q3LI54	63 aa		6.63	□□□□□ -1.35
NOD2-204	ENST00000527052		H7BZZ5	65 aa		6.59	□□□□□ -1.35
NOD2-204	ENST00000527052	NEB	P20929	6669 aa		6.58	□□□□□ -1.36
NOD2-204	ENST00000527052	CCDC179	H3BU77	68 aa		6.58	□□□□□ -1.36
NOD2-204	ENST00000527052	SPTSSB	Q8NFR3	76 aa		6.58	□□□□□ -1.36
NOD2-204	ENST00000527052	ATP5E	P56381	51 aa	Predicted RBP	6.57	□□□□□ -1.36
NOD2-204	ENST00000527052	KRTAP10-5	P60370	271 aa		6.55	□□□□□ -1.36
NOD2-204	ENST00000527052	CHKB-CPT1B	H3BT56	60 aa		6.54	□□□□□ -1.36
NOD2-204	ENST00000527052	MUC12	Q9UKN1	5478 aa		6.53	□□□□□ -1.36
NOD2-204	ENST00000527052	KRTAP3-3	Q9BYR6	98 aa		6.52	□□□□□ -1.37
NOD2-204	ENST00000527052	CRIPT	Q9P021	101 aa		6.52	□□□□□ -1.37
NOD2-204	ENST00000527052	TMEM258	P61165	79 aa		6.5	□□□□□ -1.37
NOD2-204	ENST00000527052	CYSTM1	Q9H1C7	97 aa		6.49	□□□□□ -1.37
NOD2-204	ENST00000527052	PCP4	P48539	62 aa		6.44	□□□□□ -1.38
NOD2-204	ENST00000527052	COA5	Q86WW8	74 aa		6.43	□□□□□ -1.38
NOD2-204	ENST00000527052	KRTAP5-9	P26371	169 aa		6.42	□□□□□ -1.38
NOD2-204	ENST00000527052		H0YAA0	97 aa		6.41	□□□□□ -1.38
NOD2-204	ENST00000527052	MDN1	Q9NU22	5596 aa		6.41	□□□□□ -1.38
NOD2-204	ENST00000527052	KMT2D	O14686	5537 aa		6.4	□□□□□ -1.38
NOD2-204	ENST00000527052	KRTAP20-1	Q3LI63	56 aa		6.37	□□□□□ -1.39
NOD2-204	ENST00000527052	SEC61G	P60059	68 aa		6.3	□□□□□ -1.4
NOD2-204	ENST00000527052	ADM2	Q7Z4H4	148 aa		6.29	□□□□□ -1.4
NOD2-204	ENST00000527052	PRO2289	Q9P1D8	64 aa		6.29	□□□□□ -1.4
NOD2-204	ENST00000527052	SERP1	Q9Y6X1	66 aa		6.28	□□□□□ -1.4
NOD2-204	ENST00000527052	PLAC4	Q8WY50	150 aa		6.21	□□□□□ -1.42
NOD2-204	ENST00000527052	MT1X	P80297	61 aa		6.19	□□□□□ -1.42
NOD2-204	ENST00000527052	SPRR2F	Q96RM1	72 aa		6.18	□□□□□ -1.42
NOD2-204	ENST00000527052	PRR15L	Q9BU68	103 aa		6.18	□□□□□ -1.42
NOD2-204	ENST00000527052		R4GN34	69 aa		6.17	□□□□□ -1.42
NOD2-204	ENST00000527052		A0A1B0GU69	56 aa		6.16	□□□□□ -1.42
NOD2-204	ENST00000527052	KRTAP2-3	P0C7H8	128 aa		6.16	□□□□□ -1.42
NOD2-204	ENST00000527052	KRTAP2-4	Q9BYR9	128 aa		6.16	□□□□□ -1.42
NOD2-204	ENST00000527052		V9GYY9	64 aa		6.15	□□□□□ -1.42
NOD2-204	ENST00000527052	KRTAP3-2	Q9BYR7	98 aa		6.14	□□□□□ -1.43
NOD2-204	ENST00000527052		M0QZ58	72 aa		6.13	□□□□□ -1.43
NOD2-204	ENST00000527052		P0C880	135 aa		6.13	□□□□□ -1.43
NOD2-204	ENST00000527052	SPRR2E	P22531	72 aa		6.13	□□□□□ -1.43
NOD2-204	ENST00000527052	SPRR2B	P35325	72 aa		6.13	□□□□□ -1.43
NOD2-204	ENST00000527052	SPRR2A	P35326	72 aa		6.13	□□□□□ -1.43
NOD2-204	ENST00000527052	RPS28	P62857	69 aa	Known RBP	6.13	□□□□□ -1.43
NOD2-204	ENST00000527052	KRTAP12-2	P59991	146 aa		6.12	□□□□□ -1.43
NOD2-204	ENST00000527052	KRTAP8-1	Q8IUC2	63 aa		6.12	□□□□□ -1.43
NOD2-204	ENST00000527052	LINC01558	Q9Y6Z2	57 aa		6.11	□□□□□ -1.43
NOD2-204	ENST00000527052	SMIM26	A0A096LP01	95 aa		6.08	□□□□□ -1.44
NOD2-204	ENST00000527052		A0A1B0GU33	70 aa		6.04	□□□□□ -1.44
NOD2-204	ENST00000527052		Q1T7F1	81 aa		6.02	□□□□□ -1.45
NOD2-204	ENST00000527052	LCE1A	Q5T7P2	110 aa		6.02	□□□□□ -1.45
NOD2-204	ENST00000527052	LINC01554	Q52M75	96 aa		6.01	□□□□□ -1.45
NOD2-204	ENST00000527052	KRTAP2-2	Q9BYT5	123 aa		5.95	□□□□□ -1.46
NOD2-204	ENST00000527052	KRTAP2-1	Q9BYU5	128 aa		5.95	□□□□□ -1.46
NOD2-204	ENST00000527052	KRTAP4-8	A0A0G2JLE6	195 aa		5.94	□□□□□ -1.46
NOD2-204	ENST00000527052	KRTAP4-8	Q9BYQ9	185 aa		5.94	□□□□□ -1.46
NOD2-204	ENST00000527052	UQCR11	O14957	56 aa		5.93	□□□□□ -1.46
NOD2-204	ENST00000527052	SPRR2D	P22532	72 aa		5.93	□□□□□ -1.46
NOD2-204	ENST00000527052	KRTAP10-7	P60409	375 aa	Predicted RBP	5.89	□□□□□ -1.47
NOD2-204	ENST00000527052	KRTAP10-12	P60413	245 aa		5.89	□□□□□ -1.47
NOD2-204	ENST00000527052	PSPHP1	O15172	72 aa		5.86	□□□□□ -1.47
NOD2-204	ENST00000527052	KRTAP13-4	Q3LI77	160 aa		5.86	□□□□□ -1.47
NOD2-204	ENST00000527052	SPATA8	Q6RVD6	105 aa		5.86	□□□□□ -1.47
NOD2-204	ENST00000527052		A0A0D9SG42	100 aa		5.81	□□□□□ -1.48
NOD2-204	ENST00000527052	MIR22HG	Q0VDD5	57 aa		5.8	□□□□□ -1.48
NOD2-204	ENST00000527052	LCE3B	Q5TA77	95 aa		5.78	□□□□□ -1.48
NOD2-204	ENST00000527052		A6NED7	52 aa		5.77	□□□□□ -1.49
NOD2-204	ENST00000527052	SPINT4	Q6UDR6	99 aa		5.75	□□□□□ -1.49
NOD2-204	ENST00000527052		K7ERS5	55 aa		5.74	□□□□□ -1.49
NOD2-204	ENST00000527052	CAMK2N1	Q7Z7J9	78 aa		5.74	□□□□□ -1.49
NOD2-204	ENST00000527052		A8MU10	97 aa		5.71	□□□□□ -1.5
NOD2-204	ENST00000527052	KRTAP12-1	P59990	96 aa		5.69	□□□□□ -1.5
NOD2-204	ENST00000527052	CDC42SE1	Q9NRR8	79 aa		5.62	□□□□□ -1.51
NOD2-204	ENST00000527052	KRTAP19-7	Q3SYF9	63 aa		5.53	□□□□□ -1.52
NOD2-204	ENST00000527052	LCE5A	Q5TCM9	118 aa		5.53	□□□□□ -1.52
NOD2-204	ENST00000527052	MT1E	P04732	61 aa		5.51	□□□□□ -1.53
NOD2-204	ENST00000527052	GPR98	Q8WXG9	6306 aa		5.51	□□□□□ -1.53
NOD2-204	ENST00000527052	KRTAP19-3	Q7Z4W3	81 aa		5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms