RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 RNF213Q63HN8 5207 aa9.84□□□□□ -0.83
PPP1CA-204ENST00000526510 LCA10Q71F78 164 aa9.83□□□□□ -0.84
PPP1CA-204ENST00000526510 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
PPP1CA-204ENST00000526510 S4R3F8 94 aa9.82□□□□□ -0.84
PPP1CA-204ENST00000526510 Q1T7F1 81 aa9.76□□□□□ -0.85
PPP1CA-204ENST00000526510 SPTSSBQ8NFR3 76 aa9.72□□□□□ -0.85
PPP1CA-204ENST00000526510 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
PPP1CA-204ENST00000526510 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
PPP1CA-204ENST00000526510 V9GYY9 64 aa9.67□□□□□ -0.86
PPP1CA-204ENST00000526510 FLGP20930 4061 aaPredicted RBP9.67□□□□□ -0.86
PPP1CA-204ENST00000526510 PSPHP1O15172 72 aa9.61□□□□□ -0.87
PPP1CA-204ENST00000526510 PRR15LQ9BU68 103 aa9.59□□□□□ -0.87
PPP1CA-204ENST00000526510 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
PPP1CA-204ENST00000526510 A0A1B0GU69 56 aa9.54□□□□□ -0.88
PPP1CA-204ENST00000526510 Q5VV11 94 aa9.53□□□□□ -0.88
PPP1CA-204ENST00000526510 FAT4Q6V0I7 4981 aa9.53□□□□□ -0.88
PPP1CA-204ENST00000526510 MT1HP80294 61 aa9.46□□□□□ -0.89
PPP1CA-204ENST00000526510 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.89
PPP1CA-204ENST00000526510 SEC61GP60059 68 aa9.45□□□□□ -0.9
PPP1CA-204ENST00000526510 KRTAP10-6P60371 365 aaPredicted RBP9.43□□□□□ -0.9
PPP1CA-204ENST00000526510 ADM2Q7Z4H4 148 aa9.39□□□□□ -0.91
PPP1CA-204ENST00000526510 H0YAA0 97 aa9.38□□□□□ -0.91
PPP1CA-204ENST00000526510 P0C880 135 aa9.37□□□□□ -0.91
PPP1CA-204ENST00000526510 M0R2T5 61 aa9.3□□□□□ -0.92
PPP1CA-204ENST00000526510 A0A1B0GU33 70 aa9.28□□□□□ -0.92
PPP1CA-204ENST00000526510 A6NED7 52 aa9.26□□□□□ -0.93
PPP1CA-204ENST00000526510 UQCR11O14957 56 aa9.23□□□□□ -0.93
PPP1CA-204ENST00000526510 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
PPP1CA-204ENST00000526510 KRTAP13-4Q3LI77 160 aa9.19□□□□□ -0.94
PPP1CA-204ENST00000526510 A8MU10 97 aa9.17□□□□□ -0.94
PPP1CA-204ENST00000526510 SPATA8Q6RVD6 105 aa9.17□□□□□ -0.94
PPP1CA-204ENST00000526510 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
PPP1CA-204ENST00000526510 MIR22HGQ0VDD5 57 aa9.14□□□□□ -0.95
PPP1CA-204ENST00000526510 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
PPP1CA-204ENST00000526510 KRTAP9-8Q9BYQ0 159 aa9.13□□□□□ -0.95
PPP1CA-204ENST00000526510 CDC42SE1Q9NRR8 79 aa9.11□□□□□ -0.95
PPP1CA-204ENST00000526510 MT2AP02795 61 aa9.09□□□□□ -0.95
PPP1CA-204ENST00000526510 PRO0628Q9UI54 55 aa9.07□□□□□ -0.96
PPP1CA-204ENST00000526510 M0QZ58 72 aa9.04□□□□□ -0.96
PPP1CA-204ENST00000526510 MT1FP04733 61 aa9.04□□□□□ -0.96
PPP1CA-204ENST00000526510 R4GN34 69 aa9.03□□□□□ -0.96
PPP1CA-204ENST00000526510 KRTAP10-10P60014 251 aa8.97□□□□□ -0.97
PPP1CA-204ENST00000526510 CRIPTQ9P021 101 aa8.96□□□□□ -0.98
PPP1CA-204ENST00000526510 A0A0D9SG42 100 aa8.95□□□□□ -0.98
PPP1CA-204ENST00000526510 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
PPP1CA-204ENST00000526510 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
PPP1CA-204ENST00000526510 SPRR2GQ9BYE4 73 aa8.85□□□□□ -0.99
PPP1CA-204ENST00000526510 KRTAP12-1P59990 96 aa8.8□□□□□ -1
PPP1CA-204ENST00000526510 KRTAP9-3Q9BYQ3 159 aa8.8□□□□□ -1
PPP1CA-204ENST00000526510 KRTAP12-2P59991 146 aa8.78□□□□□ -1
PPP1CA-204ENST00000526510 SPINT4Q6UDR6 99 aa8.72□□□□□ -1.01
PPP1CA-204ENST00000526510 A6NN06 94 aa8.7□□□□□ -1.02
PPP1CA-204ENST00000526510 PMAIP1Q13794 54 aa8.66□□□□□ -1.02
PPP1CA-204ENST00000526510 K7ERS5 55 aa8.65□□□□□ -1.02
PPP1CA-204ENST00000526510 KRTAP19-8Q3LI54 63 aa8.64□□□□□ -1.03
PPP1CA-204ENST00000526510 LCE2BO14633 110 aa8.58□□□□□ -1.04
PPP1CA-204ENST00000526510 MT1BP07438 61 aa8.56□□□□□ -1.04
PPP1CA-204ENST00000526510 SVIPQ8NHG7 77 aa8.55□□□□□ -1.04
PPP1CA-204ENST00000526510 PLAC4Q8WY50 150 aa8.49□□□□□ -1.05
PPP1CA-204ENST00000526510 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
PPP1CA-204ENST00000526510 KTN1-AS1Q86SY8 53 aa8.38□□□□□ -1.07
PPP1CA-204ENST00000526510 USH2AO75445 5202 aa8.36□□□□□ -1.07
PPP1CA-204ENST00000526510 ROMO1P60602 79 aa8.36□□□□□ -1.07
PPP1CA-204ENST00000526510 C10orf95Q9H7T3 257 aa8.35□□□□□ -1.07
PPP1CA-204ENST00000526510 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
PPP1CA-204ENST00000526510 MT1XP80297 61 aa8.26□□□□□ -1.09
PPP1CA-204ENST00000526510 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
PPP1CA-204ENST00000526510 PRAC1Q96KF2 57 aa8.15□□□□□ -1.1
PPP1CA-204ENST00000526510 KRTAP9-2Q9BYQ4 174 aa8.15□□□□□ -1.1
PPP1CA-204ENST00000526510 SSPOA2VEC9 5147 aa8.11□□□□□ -1.11
PPP1CA-204ENST00000526510 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
PPP1CA-204ENST00000526510 KRTAP25-1Q3LHN0 102 aa8.04□□□□□ -1.12
PPP1CA-204ENST00000526510 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
PPP1CA-204ENST00000526510 TNP1P09430 55 aa8.02□□□□□ -1.13
PPP1CA-204ENST00000526510 FSIP2Q5CZC0 6907 aa7.98□□□□□ -1.13
PPP1CA-204ENST00000526510 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
PPP1CA-204ENST00000526510 KRTAP10-12P60413 245 aa7.81□□□□□ -1.16
PPP1CA-204ENST00000526510 CRCT1Q9UGL9 99 aa7.79□□□□□ -1.16
PPP1CA-204ENST00000526510 LCE3AQ5TA76 89 aa7.76□□□□□ -1.17
PPP1CA-204ENST00000526510 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
PPP1CA-204ENST00000526510 FCGBPQ9Y6R7 5405 aaPredicted RBP7.74□□□□□ -1.17
PPP1CA-204ENST00000526510 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
PPP1CA-204ENST00000526510 KRTAP9-6A0A140TA67 174 aa7.72□□□□□ -1.17
PPP1CA-204ENST00000526510 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
PPP1CA-204ENST00000526510 KRTAP4-8Q9BYQ9 185 aa7.65□□□□□ -1.18
PPP1CA-204ENST00000526510 KMT2DO14686 5537 aa7.62□□□□□ -1.19
PPP1CA-204ENST00000526510 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
PPP1CA-204ENST00000526510 KRTAP19-5Q3LI72 72 aa7.44□□□□□ -1.22
PPP1CA-204ENST00000526510 KRTAP12-3P60328 96 aa7.42□□□□□ -1.22
PPP1CA-204ENST00000526510 KRTAP19-7Q3SYF9 63 aa7.38□□□□□ -1.23
PPP1CA-204ENST00000526510 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
PPP1CA-204ENST00000526510 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
PPP1CA-204ENST00000526510 MT1EP04732 61 aa7.23□□□□□ -1.25
PPP1CA-204ENST00000526510 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.22□□□□□ -1.25
PPP1CA-204ENST00000526510 SPRR2FQ96RM1 72 aa7.11□□□□□ -1.27
PPP1CA-204ENST00000526510 MT1LQ93083 61 aa7.09□□□□□ -1.27
PPP1CA-204ENST00000526510 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
PPP1CA-204ENST00000526510 KRTAP5-9P26371 169 aa7.06□□□□□ -1.28
PPP1CA-204ENST00000526510 MUC12Q9UKN1 5478 aa7.05□□□□□ -1.28
PPP1CA-204ENST00000526510 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms