RNA–Protein interactions for RNA: ENST00000526494.5

CAPRIN1-204, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-204ENST00000526494 LCA10Q71F78 164 aa7.77□□□□□ -1.17
CAPRIN1-204ENST00000526494 KRTAP9-6A0A140TA67 174 aa7.75□□□□□ -1.17
CAPRIN1-204ENST00000526494 MT1HP80294 61 aa7.73□□□□□ -1.17
CAPRIN1-204ENST00000526494 M0R2T5 61 aa7.7□□□□□ -1.18
CAPRIN1-204ENST00000526494 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
CAPRIN1-204ENST00000526494 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
CAPRIN1-204ENST00000526494 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
CAPRIN1-204ENST00000526494 SPTSSBQ8NFR3 76 aa7.68□□□□□ -1.18
CAPRIN1-204ENST00000526494 FAT4Q6V0I7 4981 aa7.68□□□□□ -1.18
CAPRIN1-204ENST00000526494 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
CAPRIN1-204ENST00000526494 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
CAPRIN1-204ENST00000526494 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
CAPRIN1-204ENST00000526494 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
CAPRIN1-204ENST00000526494 KRTAP10-6P60371 365 aaPredicted RBP7.48□□□□□ -1.21
CAPRIN1-204ENST00000526494 SMIM26A0A096LP01 95 aa7.47□□□□□ -1.21
CAPRIN1-204ENST00000526494 H0YAA0 97 aa7.45□□□□□ -1.22
CAPRIN1-204ENST00000526494 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
CAPRIN1-204ENST00000526494 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
CAPRIN1-204ENST00000526494 SEC61GP60059 68 aa7.43□□□□□ -1.22
CAPRIN1-204ENST00000526494 LINC01558Q9Y6Z2 57 aa7.4□□□□□ -1.22
CAPRIN1-204ENST00000526494 MT2AP02795 61 aa7.39□□□□□ -1.23
CAPRIN1-204ENST00000526494 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
CAPRIN1-204ENST00000526494 A0A1B0GU69 56 aa7.38□□□□□ -1.23
CAPRIN1-204ENST00000526494 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
CAPRIN1-204ENST00000526494 V9GYY9 64 aa7.37□□□□□ -1.23
CAPRIN1-204ENST00000526494 P0C880 135 aa7.35□□□□□ -1.23
CAPRIN1-204ENST00000526494 Q1T7F1 81 aa7.35□□□□□ -1.23
CAPRIN1-204ENST00000526494 PRR15LQ9BU68 103 aa7.35□□□□□ -1.23
CAPRIN1-204ENST00000526494 KRTAP10-10P60014 251 aa7.34□□□□□ -1.23
CAPRIN1-204ENST00000526494 MT1FP04733 61 aa7.33□□□□□ -1.24
CAPRIN1-204ENST00000526494 PSPHP1O15172 72 aa7.27□□□□□ -1.25
CAPRIN1-204ENST00000526494 A0A1B0GU33 70 aa7.23□□□□□ -1.25
CAPRIN1-204ENST00000526494 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
CAPRIN1-204ENST00000526494 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
CAPRIN1-204ENST00000526494 R4GN34 69 aa7.19□□□□□ -1.26
CAPRIN1-204ENST00000526494 M0QZ58 72 aa7.18□□□□□ -1.26
CAPRIN1-204ENST00000526494 Q5VV11 94 aa7.17□□□□□ -1.26
CAPRIN1-204ENST00000526494 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
CAPRIN1-204ENST00000526494 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
CAPRIN1-204ENST00000526494 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
CAPRIN1-204ENST00000526494 UQCR11O14957 56 aa7.1□□□□□ -1.27
CAPRIN1-204ENST00000526494 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
CAPRIN1-204ENST00000526494 SPRR2GQ9BYE4 73 aa7.1□□□□□ -1.27
CAPRIN1-204ENST00000526494 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
CAPRIN1-204ENST00000526494 A6NED7 52 aa7.06□□□□□ -1.28
CAPRIN1-204ENST00000526494 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
CAPRIN1-204ENST00000526494 A0A0D9SG42 100 aa7.02□□□□□ -1.29
CAPRIN1-204ENST00000526494 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.29
CAPRIN1-204ENST00000526494 A8MU10 97 aa6.98□□□□□ -1.29
CAPRIN1-204ENST00000526494 LCE2BO14633 110 aa6.98□□□□□ -1.29
CAPRIN1-204ENST00000526494 LCE2DQ5TA82 110 aaPredicted RBP6.98□□□□□ -1.29
CAPRIN1-204ENST00000526494 KRTAP19-8Q3LI54 63 aa6.95□□□□□ -1.3
CAPRIN1-204ENST00000526494 A6NN06 94 aa6.89□□□□□ -1.31
CAPRIN1-204ENST00000526494 MT1BP07438 61 aa6.88□□□□□ -1.31
CAPRIN1-204ENST00000526494 SPINT4Q6UDR6 99 aa6.87□□□□□ -1.31
CAPRIN1-204ENST00000526494 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
CAPRIN1-204ENST00000526494 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
CAPRIN1-204ENST00000526494 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
CAPRIN1-204ENST00000526494 KRTAP12-1P59990 96 aa6.84□□□□□ -1.31
CAPRIN1-204ENST00000526494 KRTAP12-2P59991 146 aa6.81□□□□□ -1.32
CAPRIN1-204ENST00000526494 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
CAPRIN1-204ENST00000526494 K7ERS5 55 aa6.77□□□□□ -1.33
CAPRIN1-204ENST00000526494 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
CAPRIN1-204ENST00000526494 USH2AO75445 5202 aa6.73□□□□□ -1.33
CAPRIN1-204ENST00000526494 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
CAPRIN1-204ENST00000526494 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
CAPRIN1-204ENST00000526494 MT1XP80297 61 aa6.6□□□□□ -1.35
CAPRIN1-204ENST00000526494 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
CAPRIN1-204ENST00000526494 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
CAPRIN1-204ENST00000526494 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
CAPRIN1-204ENST00000526494 PRO0628Q9UI54 55 aa6.51□□□□□ -1.37
CAPRIN1-204ENST00000526494 C10orf95Q9H7T3 257 aa6.49□□□□□ -1.37
CAPRIN1-204ENST00000526494 ROMO1P60602 79 aa6.43□□□□□ -1.38
CAPRIN1-204ENST00000526494 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
CAPRIN1-204ENST00000526494 SYNE2Q8WXH0 6885 aaKnown RBP6.4□□□□□ -1.38
CAPRIN1-204ENST00000526494 TNP1P09430 55 aa6.36□□□□□ -1.39
CAPRIN1-204ENST00000526494 KRTAP10-7P60409 375 aaPredicted RBP6.33□□□□□ -1.4
CAPRIN1-204ENST00000526494 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
CAPRIN1-204ENST00000526494 KRTAP25-1Q3LHN0 102 aa6.3□□□□□ -1.4
CAPRIN1-204ENST00000526494 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
CAPRIN1-204ENST00000526494 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
CAPRIN1-204ENST00000526494 NEBP20929 6669 aa6.18□□□□□ -1.42
CAPRIN1-204ENST00000526494 KRTAP4-8A0A0G2JLE6 195 aa6.13□□□□□ -1.43
CAPRIN1-204ENST00000526494 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
CAPRIN1-204ENST00000526494 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
CAPRIN1-204ENST00000526494 KTN1-AS1Q86SY8 53 aa6.07□□□□□ -1.44
CAPRIN1-204ENST00000526494 KRTAP8-1Q8IUC2 63 aa6.06□□□□□ -1.44
CAPRIN1-204ENST00000526494 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
CAPRIN1-204ENST00000526494 PRAC1Q96KF2 57 aa6.04□□□□□ -1.44
CAPRIN1-204ENST00000526494 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
CAPRIN1-204ENST00000526494 KMT2DO14686 5537 aa5.94□□□□□ -1.46
CAPRIN1-204ENST00000526494 KRTAP19-5Q3LI72 72 aa5.94□□□□□ -1.46
CAPRIN1-204ENST00000526494 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
CAPRIN1-204ENST00000526494 GPR98Q8WXG9 6306 aa5.88□□□□□ -1.47
CAPRIN1-204ENST00000526494 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
CAPRIN1-204ENST00000526494 KRTAP6-3Q3LI67 103 aa5.88□□□□□ -1.47
CAPRIN1-204ENST00000526494 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
CAPRIN1-204ENST00000526494 SPRR2FQ96RM1 72 aa5.88□□□□□ -1.47
CAPRIN1-204ENST00000526494 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
CAPRIN1-204ENST00000526494 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms