RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
SMPD1-202ENST00000526280 M0R2T5 61 aa6.46□□□□□ -1.38
SMPD1-202ENST00000526280 COA5Q86WW8 74 aa6.43□□□□□ -1.38
SMPD1-202ENST00000526280 KRTAP10-6P60371 365 aaPredicted RBP6.41□□□□□ -1.38
SMPD1-202ENST00000526280 Q1T7F1 81 aa6.41□□□□□ -1.38
SMPD1-202ENST00000526280 LORP23490 312 aaPredicted RBP6.4□□□□□ -1.39
SMPD1-202ENST00000526280 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
SMPD1-202ENST00000526280 V9GYY9 64 aa6.36□□□□□ -1.39
SMPD1-202ENST00000526280 ACYP2P14621 99 aa6.34□□□□□ -1.39
SMPD1-202ENST00000526280 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.39
SMPD1-202ENST00000526280 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
SMPD1-202ENST00000526280 PSPHP1O15172 72 aa6.28□□□□□ -1.4
SMPD1-202ENST00000526280 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
SMPD1-202ENST00000526280 A8MUN3 132 aa6.27□□□□□ -1.41
SMPD1-202ENST00000526280 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
SMPD1-202ENST00000526280 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
SMPD1-202ENST00000526280 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
SMPD1-202ENST00000526280 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
SMPD1-202ENST00000526280 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
SMPD1-202ENST00000526280 Q5VV11 94 aa6.23□□□□□ -1.41
SMPD1-202ENST00000526280 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
SMPD1-202ENST00000526280 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
SMPD1-202ENST00000526280 MT2AP02795 61 aa6.2□□□□□ -1.42
SMPD1-202ENST00000526280 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
SMPD1-202ENST00000526280 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
SMPD1-202ENST00000526280 KRTAP3-2Q9BYR7 98 aa6.2□□□□□ -1.42
SMPD1-202ENST00000526280 PRO0628Q9UI54 55 aa6.19□□□□□ -1.42
SMPD1-202ENST00000526280 S4R3F8 94 aa6.17□□□□□ -1.42
SMPD1-202ENST00000526280 MT1FP04733 61 aa6.15□□□□□ -1.43
SMPD1-202ENST00000526280 LCA10Q71F78 164 aa6.14□□□□□ -1.43
SMPD1-202ENST00000526280 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
SMPD1-202ENST00000526280 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
SMPD1-202ENST00000526280 A6NED7 52 aa6.09□□□□□ -1.43
SMPD1-202ENST00000526280 SPTSSBQ8NFR3 76 aa6.07□□□□□ -1.44
SMPD1-202ENST00000526280 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
SMPD1-202ENST00000526280 A0A1B0GU69 56 aa6.06□□□□□ -1.44
SMPD1-202ENST00000526280 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
SMPD1-202ENST00000526280 A8MU10 97 aa6□□□□□ -1.45
SMPD1-202ENST00000526280 LCE2BO14633 110 aa5.98□□□□□ -1.45
SMPD1-202ENST00000526280 USH2AO75445 5202 aa5.96□□□□□ -1.46
SMPD1-202ENST00000526280 SEC61GP60059 68 aa5.96□□□□□ -1.46
SMPD1-202ENST00000526280 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
SMPD1-202ENST00000526280 H0YAA0 97 aa5.91□□□□□ -1.46
SMPD1-202ENST00000526280 UQCR11O14957 56 aa5.91□□□□□ -1.46
SMPD1-202ENST00000526280 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
SMPD1-202ENST00000526280 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
SMPD1-202ENST00000526280 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
SMPD1-202ENST00000526280 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
SMPD1-202ENST00000526280 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
SMPD1-202ENST00000526280 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
SMPD1-202ENST00000526280 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
SMPD1-202ENST00000526280 A0A1B0GU33 70 aa5.81□□□□□ -1.48
SMPD1-202ENST00000526280 A6NN06 94 aa5.81□□□□□ -1.48
SMPD1-202ENST00000526280 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
SMPD1-202ENST00000526280 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.77□□□□□ -1.49
SMPD1-202ENST00000526280 KRTAP19-8Q3LI54 63 aa5.75□□□□□ -1.49
SMPD1-202ENST00000526280 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
SMPD1-202ENST00000526280 P0C880 135 aa5.74□□□□□ -1.49
SMPD1-202ENST00000526280 KRTAP19-6Q3LI70 58 aa5.73□□□□□ -1.49
SMPD1-202ENST00000526280 MT1BP07438 61 aa5.72□□□□□ -1.49
SMPD1-202ENST00000526280 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
SMPD1-202ENST00000526280 R4GN34 69 aa5.67□□□□□ -1.5
SMPD1-202ENST00000526280 M0QZ58 72 aa5.63□□□□□ -1.51
SMPD1-202ENST00000526280 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
SMPD1-202ENST00000526280 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
SMPD1-202ENST00000526280 K7ERS5 55 aa5.56□□□□□ -1.52
SMPD1-202ENST00000526280 A0A0D9SG42 100 aa5.54□□□□□ -1.52
SMPD1-202ENST00000526280 KRTAP10-5P60370 271 aa5.53□□□□□ -1.52
SMPD1-202ENST00000526280 LINC01554Q52M75 96 aa5.53□□□□□ -1.52
SMPD1-202ENST00000526280 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
SMPD1-202ENST00000526280 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
SMPD1-202ENST00000526280 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
SMPD1-202ENST00000526280 MT1XP80297 61 aa5.43□□□□□ -1.54
SMPD1-202ENST00000526280 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
SMPD1-202ENST00000526280 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
SMPD1-202ENST00000526280 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
SMPD1-202ENST00000526280 ROMO1P60602 79 aa5.4□□□□□ -1.55
SMPD1-202ENST00000526280 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.55
SMPD1-202ENST00000526280 SPINT4Q6UDR6 99 aa5.39□□□□□ -1.55
SMPD1-202ENST00000526280 KRTAP25-1Q3LHN0 102 aa5.29□□□□□ -1.56
SMPD1-202ENST00000526280 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
SMPD1-202ENST00000526280 NEBP20929 6669 aa5.2□□□□□ -1.58
SMPD1-202ENST00000526280 KMT2DO14686 5537 aa5.19□□□□□ -1.58
SMPD1-202ENST00000526280 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
SMPD1-202ENST00000526280 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
SMPD1-202ENST00000526280 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
SMPD1-202ENST00000526280 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
SMPD1-202ENST00000526280 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
SMPD1-202ENST00000526280 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
SMPD1-202ENST00000526280 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
SMPD1-202ENST00000526280 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
SMPD1-202ENST00000526280 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
SMPD1-202ENST00000526280 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
SMPD1-202ENST00000526280 MDN1Q9NU22 5596 aa5.02□□□□□ -1.61
SMPD1-202ENST00000526280 SPRR2EP22531 72 aa4.95□□□□□ -1.62
SMPD1-202ENST00000526280 SPRR2BP35325 72 aa4.95□□□□□ -1.62
SMPD1-202ENST00000526280 SPRR2AP35326 72 aa4.95□□□□□ -1.62
SMPD1-202ENST00000526280 TNP1P09430 55 aa4.91□□□□□ -1.62
SMPD1-202ENST00000526280 H3BS24 57 aa4.9□□□□□ -1.63
SMPD1-202ENST00000526280 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms