RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 DEFB116Q30KQ4 102 aa5.76□□□□□ -1.49
TRAPPC4-204ENST00000524797 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
TRAPPC4-204ENST00000524797 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
TRAPPC4-204ENST00000524797 MP68P56378 58 aa5.74□□□□□ -1.49
TRAPPC4-204ENST00000524797 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
TRAPPC4-204ENST00000524797 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
TRAPPC4-204ENST00000524797 CHKB-CPT1BH3BT56 60 aa5.72□□□□□ -1.49
TRAPPC4-204ENST00000524797 K7EQZ3 153 aa5.72□□□□□ -1.49
TRAPPC4-204ENST00000524797 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
TRAPPC4-204ENST00000524797 IGHV6-1A0A0B4J1U7 121 aa5.72□□□□□ -1.49
TRAPPC4-204ENST00000524797 A8MU10 97 aa5.7□□□□□ -1.5
TRAPPC4-204ENST00000524797 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
TRAPPC4-204ENST00000524797 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
TRAPPC4-204ENST00000524797 H3BPC8 53 aa5.68□□□□□ -1.5
TRAPPC4-204ENST00000524797 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
TRAPPC4-204ENST00000524797 LINC00208Q96KT6 92 aa5.67□□□□□ -1.5
TRAPPC4-204ENST00000524797 LOC101927531A0A1B0GV80 90 aa5.66□□□□□ -1.5
TRAPPC4-204ENST00000524797 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC4-204ENST00000524797 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
TRAPPC4-204ENST00000524797 A6NED7 52 aa5.64□□□□□ -1.51
TRAPPC4-204ENST00000524797 HRES1P13985 223 aa5.64□□□□□ -1.51
TRAPPC4-204ENST00000524797 PRR15LQ9BU68 103 aa5.64□□□□□ -1.51
TRAPPC4-204ENST00000524797 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC4-204ENST00000524797 H0Y9P7 68 aa5.63□□□□□ -1.51
TRAPPC4-204ENST00000524797 CASC2Q6XLA1 102 aa5.6□□□□□ -1.51
TRAPPC4-204ENST00000524797 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
TRAPPC4-204ENST00000524797 A8MWP4 228 aa5.59□□□□□ -1.51
TRAPPC4-204ENST00000524797 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
TRAPPC4-204ENST00000524797 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
TRAPPC4-204ENST00000524797 COA5Q86WW8 74 aa5.56□□□□□ -1.52
TRAPPC4-204ENST00000524797 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
TRAPPC4-204ENST00000524797 SPINK7P58062 85 aa5.54□□□□□ -1.52
TRAPPC4-204ENST00000524797 MT2AP02795 61 aa5.52□□□□□ -1.53
TRAPPC4-204ENST00000524797 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
TRAPPC4-204ENST00000524797 MMP24-AS1A0A0U1RRL7 71 aa5.51□□□□□ -1.53
TRAPPC4-204ENST00000524797 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
TRAPPC4-204ENST00000524797 TP53AIP1Q9HCN2 124 aa5.49□□□□□ -1.53
TRAPPC4-204ENST00000524797 MRPL34Q9BQ48 92 aaKnown RBP5.48□□□□□ -1.53
TRAPPC4-204ENST00000524797 MT1FP04733 61 aa5.47□□□□□ -1.53
TRAPPC4-204ENST00000524797 KRTAP10-10P60014 251 aa5.42□□□□□ -1.54
TRAPPC4-204ENST00000524797 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
TRAPPC4-204ENST00000524797 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
TRAPPC4-204ENST00000524797 USH2AO75445 5202 aa5.4□□□□□ -1.54
TRAPPC4-204ENST00000524797 ADM2Q7Z4H4 148 aa5.39□□□□□ -1.55
TRAPPC4-204ENST00000524797 Q5W150 140 aa5.38□□□□□ -1.55
TRAPPC4-204ENST00000524797 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
TRAPPC4-204ENST00000524797 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
TRAPPC4-204ENST00000524797 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
TRAPPC4-204ENST00000524797 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
TRAPPC4-204ENST00000524797 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
TRAPPC4-204ENST00000524797 ROMO1P60602 79 aa5.34□□□□□ -1.55
TRAPPC4-204ENST00000524797 KRTAP9-9Q9BYP9 154 aa5.34□□□□□ -1.55
TRAPPC4-204ENST00000524797 KRTAP9-4Q9BYQ2 154 aa5.34□□□□□ -1.55
TRAPPC4-204ENST00000524797 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
TRAPPC4-204ENST00000524797 ACYP2P14621 99 aa5.32□□□□□ -1.56
TRAPPC4-204ENST00000524797 CSAG1Q6PB30 78 aa5.32□□□□□ -1.56
TRAPPC4-204ENST00000524797 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
TRAPPC4-204ENST00000524797 A0A1B0GU69 56 aa5.27□□□□□ -1.57
TRAPPC4-204ENST00000524797 SPATA8Q6RVD6 105 aa5.26□□□□□ -1.57
TRAPPC4-204ENST00000524797 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
TRAPPC4-204ENST00000524797 KRTAP9-7A8MTY7 169 aa5.23□□□□□ -1.57
TRAPPC4-204ENST00000524797 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC4-204ENST00000524797 UQCR11O14957 56 aa5.22□□□□□ -1.57
TRAPPC4-204ENST00000524797 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
TRAPPC4-204ENST00000524797 KRTAP3-1Q9BYR8 98 aa5.21□□□□□ -1.58
TRAPPC4-204ENST00000524797 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
TRAPPC4-204ENST00000524797 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
TRAPPC4-204ENST00000524797 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
TRAPPC4-204ENST00000524797 S4R3F8 94 aa5.17□□□□□ -1.58
TRAPPC4-204ENST00000524797 P0C880 135 aa5.13□□□□□ -1.59
TRAPPC4-204ENST00000524797 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
TRAPPC4-204ENST00000524797 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
TRAPPC4-204ENST00000524797 SPRR2GQ9BYE4 73 aa5.03□□□□□ -1.6
TRAPPC4-204ENST00000524797 MT1BP07438 61 aa5.02□□□□□ -1.61
TRAPPC4-204ENST00000524797 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
TRAPPC4-204ENST00000524797 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
TRAPPC4-204ENST00000524797 K7ERS5 55 aa4.99□□□□□ -1.61
TRAPPC4-204ENST00000524797 SYNE2Q8WXH0 6885 aaKnown RBP4.98□□□□□ -1.61
TRAPPC4-204ENST00000524797 LUZP6Q538Z0 58 aa4.97□□□□□ -1.61
TRAPPC4-204ENST00000524797 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
TRAPPC4-204ENST00000524797 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
TRAPPC4-204ENST00000524797 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
TRAPPC4-204ENST00000524797 CRIPTQ9P021 101 aa4.93□□□□□ -1.62
TRAPPC4-204ENST00000524797 H0YAA0 97 aa4.91□□□□□ -1.62
TRAPPC4-204ENST00000524797 KRTAP10-5P60370 271 aa4.91□□□□□ -1.62
TRAPPC4-204ENST00000524797 A0A1B0GU33 70 aa4.89□□□□□ -1.63
TRAPPC4-204ENST00000524797 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
TRAPPC4-204ENST00000524797 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
TRAPPC4-204ENST00000524797 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
TRAPPC4-204ENST00000524797 NEBP20929 6669 aa4.76□□□□□ -1.65
TRAPPC4-204ENST00000524797 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
TRAPPC4-204ENST00000524797 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
TRAPPC4-204ENST00000524797 R4GN34 69 aa4.71□□□□□ -1.66
TRAPPC4-204ENST00000524797 MT1XP80297 61 aa4.7□□□□□ -1.66
TRAPPC4-204ENST00000524797 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
TRAPPC4-204ENST00000524797 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
TRAPPC4-204ENST00000524797 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
TRAPPC4-204ENST00000524797 M0QZ58 72 aa4.68□□□□□ -1.66
TRAPPC4-204ENST00000524797 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
TRAPPC4-204ENST00000524797 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms