RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 LCE2BO14633 110 aa7.84□□□□□ -1.15
CSGALNACT1-216ENST00000524213 LCA10Q71F78 164 aa7.84□□□□□ -1.15
CSGALNACT1-216ENST00000524213 KLKP1Q107X0 134 aa7.83□□□□□ -1.16
CSGALNACT1-216ENST00000524213 TRAV7A0A075B6U4 112 aa7.8□□□□□ -1.16
CSGALNACT1-216ENST00000524213 SSPOA2VEC9 5147 aa7.77□□□□□ -1.17
CSGALNACT1-216ENST00000524213 KRTAP3-3Q9BYR6 98 aa7.74□□□□□ -1.17
CSGALNACT1-216ENST00000524213 NDUFC1O43677 76 aa7.73□□□□□ -1.17
CSGALNACT1-216ENST00000524213 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
CSGALNACT1-216ENST00000524213 DMAC1Q96GE9 116 aa7.66□□□□□ -1.18
CSGALNACT1-216ENST00000524213 SERP2Q8N6R1 65 aa7.63□□□□□ -1.19
CSGALNACT1-216ENST00000524213 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.59□□□□□ -1.19
CSGALNACT1-216ENST00000524213 H0YAA0 97 aa7.59□□□□□ -1.19
CSGALNACT1-216ENST00000524213 FCGBPQ9Y6R7 5405 aaPredicted RBP7.59□□□□□ -1.19
CSGALNACT1-216ENST00000524213 SNURFQ9Y675 71 aa7.58□□□□□ -1.2
CSGALNACT1-216ENST00000524213 ACYP2P14621 99 aa7.57□□□□□ -1.2
CSGALNACT1-216ENST00000524213 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
CSGALNACT1-216ENST00000524213 KRTAP19-6Q3LI70 58 aa7.54□□□□□ -1.2
CSGALNACT1-216ENST00000524213 CRIPTQ9P021 101 aa7.53□□□□□ -1.2
CSGALNACT1-216ENST00000524213 SPANXA2-OT1Q8N9U9 137 aa7.5□□□□□ -1.21
CSGALNACT1-216ENST00000524213 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
CSGALNACT1-216ENST00000524213 COX7CP15954 63 aa7.48□□□□□ -1.21
CSGALNACT1-216ENST00000524213 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
CSGALNACT1-216ENST00000524213 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
CSGALNACT1-216ENST00000524213 SPTSSBQ8NFR3 76 aa7.46□□□□□ -1.22
CSGALNACT1-216ENST00000524213 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
CSGALNACT1-216ENST00000524213 Q5VV11 94 aa7.41□□□□□ -1.22
CSGALNACT1-216ENST00000524213 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
CSGALNACT1-216ENST00000524213 MT1BP07438 61 aa7.35□□□□□ -1.23
CSGALNACT1-216ENST00000524213 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
CSGALNACT1-216ENST00000524213 MACF1Q9UPN3 7388 aaKnown RBP7.34□□□□□ -1.23
CSGALNACT1-216ENST00000524213 P0C880 135 aa7.3□□□□□ -1.24
CSGALNACT1-216ENST00000524213 R4GN34 69 aa7.3□□□□□ -1.24
CSGALNACT1-216ENST00000524213 KRTAP3-2Q9BYR7 98 aa7.28□□□□□ -1.24
CSGALNACT1-216ENST00000524213 H7BZZ5 65 aa7.27□□□□□ -1.25
CSGALNACT1-216ENST00000524213 COA5Q86WW8 74 aa7.24□□□□□ -1.25
CSGALNACT1-216ENST00000524213 M0QZ58 72 aa7.23□□□□□ -1.25
CSGALNACT1-216ENST00000524213 A6NN06 94 aa7.22□□□□□ -1.25
CSGALNACT1-216ENST00000524213 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
CSGALNACT1-216ENST00000524213 SYNE2Q8WXH0 6885 aaKnown RBP7.21□□□□□ -1.25
CSGALNACT1-216ENST00000524213 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
CSGALNACT1-216ENST00000524213 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
CSGALNACT1-216ENST00000524213 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
CSGALNACT1-216ENST00000524213 KRTAP6-3Q3LI67 103 aa7.1□□□□□ -1.27
CSGALNACT1-216ENST00000524213 SEC61GP60059 68 aa7.09□□□□□ -1.27
CSGALNACT1-216ENST00000524213 LINC01554Q52M75 96 aa7.09□□□□□ -1.27
CSGALNACT1-216ENST00000524213 ATP5EP56381 51 aaPredicted RBP7.07□□□□□ -1.28
CSGALNACT1-216ENST00000524213 SERP1Q9Y6X1 66 aa7.06□□□□□ -1.28
CSGALNACT1-216ENST00000524213 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
CSGALNACT1-216ENST00000524213 TMEM258P61165 79 aa6.95□□□□□ -1.3
CSGALNACT1-216ENST00000524213 MT1XP80297 61 aa6.94□□□□□ -1.3
CSGALNACT1-216ENST00000524213 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
CSGALNACT1-216ENST00000524213 A0A1B0GU69 56 aa6.9□□□□□ -1.3
CSGALNACT1-216ENST00000524213 A0A1B0GU33 70 aa6.89□□□□□ -1.31
CSGALNACT1-216ENST00000524213 PCP4P48539 62 aa6.82□□□□□ -1.32
CSGALNACT1-216ENST00000524213 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
CSGALNACT1-216ENST00000524213 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
CSGALNACT1-216ENST00000524213 PRR15LQ9BU68 103 aa6.8□□□□□ -1.32
CSGALNACT1-216ENST00000524213 MUC12Q9UKN1 5478 aa6.77□□□□□ -1.33
CSGALNACT1-216ENST00000524213 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
CSGALNACT1-216ENST00000524213 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
CSGALNACT1-216ENST00000524213 A0A0D9SG42 100 aa6.76□□□□□ -1.33
CSGALNACT1-216ENST00000524213 NEBP20929 6669 aa6.75□□□□□ -1.33
CSGALNACT1-216ENST00000524213 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
CSGALNACT1-216ENST00000524213 SMIM26A0A096LP01 95 aa6.74□□□□□ -1.33
CSGALNACT1-216ENST00000524213 KMT2DO14686 5537 aa6.73□□□□□ -1.33
CSGALNACT1-216ENST00000524213 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
CSGALNACT1-216ENST00000524213 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
CSGALNACT1-216ENST00000524213 SPRR2FQ96RM1 72 aa6.64□□□□□ -1.35
CSGALNACT1-216ENST00000524213 KRTAP8-1Q8IUC2 63 aa6.63□□□□□ -1.35
CSGALNACT1-216ENST00000524213 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
CSGALNACT1-216ENST00000524213 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
CSGALNACT1-216ENST00000524213 MDN1Q9NU22 5596 aa6.61□□□□□ -1.35
CSGALNACT1-216ENST00000524213 KRTAP4-8A0A0G2JLE6 195 aa6.59□□□□□ -1.35
CSGALNACT1-216ENST00000524213 KRTAP4-8Q9BYQ9 185 aa6.59□□□□□ -1.35
CSGALNACT1-216ENST00000524213 A8MU10 97 aa6.58□□□□□ -1.36
CSGALNACT1-216ENST00000524213 V9GYY9 64 aa6.58□□□□□ -1.36
CSGALNACT1-216ENST00000524213 UQCR11O14957 56 aa6.57□□□□□ -1.36
CSGALNACT1-216ENST00000524213 KRTAP20-1Q3LI63 56 aa6.55□□□□□ -1.36
CSGALNACT1-216ENST00000524213 SPRR2EP22531 72 aa6.53□□□□□ -1.36
CSGALNACT1-216ENST00000524213 SPRR2BP35325 72 aa6.53□□□□□ -1.36
CSGALNACT1-216ENST00000524213 SPRR2AP35326 72 aa6.53□□□□□ -1.36
CSGALNACT1-216ENST00000524213 Q1T7F1 81 aa6.49□□□□□ -1.37
CSGALNACT1-216ENST00000524213 LCE1AQ5T7P2 110 aa6.46□□□□□ -1.38
CSGALNACT1-216ENST00000524213 MIR22HGQ0VDD5 57 aa6.43□□□□□ -1.38
CSGALNACT1-216ENST00000524213 PSPHP1O15172 72 aa6.41□□□□□ -1.38
CSGALNACT1-216ENST00000524213 KRTAP2-3P0C7H8 128 aa6.4□□□□□ -1.38
CSGALNACT1-216ENST00000524213 RPS28P62857 69 aaKnown RBP6.4□□□□□ -1.38
CSGALNACT1-216ENST00000524213 KRTAP2-4Q9BYR9 128 aa6.4□□□□□ -1.38
CSGALNACT1-216ENST00000524213 K7ERS5 55 aa6.31□□□□□ -1.4
CSGALNACT1-216ENST00000524213 TNP1P09430 55 aa6.31□□□□□ -1.4
CSGALNACT1-216ENST00000524213 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
CSGALNACT1-216ENST00000524213 SPRR2DP22532 72 aa6.3□□□□□ -1.4
CSGALNACT1-216ENST00000524213 A6NED7 52 aa6.24□□□□□ -1.41
CSGALNACT1-216ENST00000524213 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
CSGALNACT1-216ENST00000524213 KRTAP2-2Q9BYT5 123 aa6.2□□□□□ -1.42
CSGALNACT1-216ENST00000524213 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
CSGALNACT1-216ENST00000524213 MT1EP04732 61 aa6.15□□□□□ -1.42
CSGALNACT1-216ENST00000524213 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
CSGALNACT1-216ENST00000524213 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
CSGALNACT1-216ENST00000524213 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms