RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
VEGFA-225ENST00000523950 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
VEGFA-225ENST00000523950 LOC101927531A0A1B0GV80 90 aa6.29□□□□□ -1.4
VEGFA-225ENST00000523950 KRTAP9-2Q9BYQ4 174 aa6.28□□□□□ -1.4
VEGFA-225ENST00000523950 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
VEGFA-225ENST00000523950 Q5W150 140 aa6.27□□□□□ -1.41
VEGFA-225ENST00000523950 C7orf65Q6ZTY9 151 aa6.27□□□□□ -1.41
VEGFA-225ENST00000523950 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
VEGFA-225ENST00000523950 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
VEGFA-225ENST00000523950 COA5Q86WW8 74 aa6.17□□□□□ -1.42
VEGFA-225ENST00000523950 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
VEGFA-225ENST00000523950 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
VEGFA-225ENST00000523950 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
VEGFA-225ENST00000523950 ACYP2P14621 99 aa6.11□□□□□ -1.43
VEGFA-225ENST00000523950 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
VEGFA-225ENST00000523950 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
VEGFA-225ENST00000523950 PSPHP1O15172 72 aa6.06□□□□□ -1.44
VEGFA-225ENST00000523950 MT2AP02795 61 aa6.06□□□□□ -1.44
VEGFA-225ENST00000523950 Q5VV11 94 aa6.06□□□□□ -1.44
VEGFA-225ENST00000523950 A8MUN3 132 aa6.05□□□□□ -1.44
VEGFA-225ENST00000523950 PRR15LQ9BU68 103 aa6.04□□□□□ -1.44
VEGFA-225ENST00000523950 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
VEGFA-225ENST00000523950 CHKB-CPT1BH3BT56 60 aa6.02□□□□□ -1.45
VEGFA-225ENST00000523950 MT1FP04733 61 aa6□□□□□ -1.45
VEGFA-225ENST00000523950 KRTAP3-1Q9BYR8 98 aa6□□□□□ -1.45
VEGFA-225ENST00000523950 LCE2BO14633 110 aa5.99□□□□□ -1.45
VEGFA-225ENST00000523950 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
VEGFA-225ENST00000523950 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
VEGFA-225ENST00000523950 S4R3F8 94 aa5.97□□□□□ -1.45
VEGFA-225ENST00000523950 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.46
VEGFA-225ENST00000523950 A6NED7 52 aa5.95□□□□□ -1.46
VEGFA-225ENST00000523950 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
VEGFA-225ENST00000523950 CSAG1Q6PB30 78 aa5.91□□□□□ -1.46
VEGFA-225ENST00000523950 LCA10Q71F78 164 aa5.91□□□□□ -1.46
VEGFA-225ENST00000523950 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
VEGFA-225ENST00000523950 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.46
VEGFA-225ENST00000523950 A0A1B0GU69 56 aa5.87□□□□□ -1.47
VEGFA-225ENST00000523950 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
VEGFA-225ENST00000523950 USH2AO75445 5202 aa5.81□□□□□ -1.48
VEGFA-225ENST00000523950 UQCR11O14957 56 aa5.79□□□□□ -1.48
VEGFA-225ENST00000523950 SEC61GP60059 68 aa5.79□□□□□ -1.48
VEGFA-225ENST00000523950 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
VEGFA-225ENST00000523950 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
VEGFA-225ENST00000523950 A6NN06 94 aa5.75□□□□□ -1.49
VEGFA-225ENST00000523950 H0YAA0 97 aa5.74□□□□□ -1.49
VEGFA-225ENST00000523950 MIR22HGQ0VDD5 57 aa5.72□□□□□ -1.49
VEGFA-225ENST00000523950 A8MU10 97 aa5.71□□□□□ -1.5
VEGFA-225ENST00000523950 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
VEGFA-225ENST00000523950 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
VEGFA-225ENST00000523950 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
VEGFA-225ENST00000523950 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
VEGFA-225ENST00000523950 KRTAP19-6Q3LI70 58 aa5.67□□□□□ -1.5
VEGFA-225ENST00000523950 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
VEGFA-225ENST00000523950 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
VEGFA-225ENST00000523950 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
VEGFA-225ENST00000523950 MT1BP07438 61 aa5.57□□□□□ -1.52
VEGFA-225ENST00000523950 A0A1B0GU33 70 aa5.56□□□□□ -1.52
VEGFA-225ENST00000523950 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
VEGFA-225ENST00000523950 K7ERS5 55 aa5.5□□□□□ -1.53
VEGFA-225ENST00000523950 P0C880 135 aa5.49□□□□□ -1.53
VEGFA-225ENST00000523950 R4GN34 69 aa5.49□□□□□ -1.53
VEGFA-225ENST00000523950 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
VEGFA-225ENST00000523950 M0QZ58 72 aa5.43□□□□□ -1.54
VEGFA-225ENST00000523950 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
VEGFA-225ENST00000523950 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
VEGFA-225ENST00000523950 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
VEGFA-225ENST00000523950 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
VEGFA-225ENST00000523950 LINC01554Q52M75 96 aa5.31□□□□□ -1.56
VEGFA-225ENST00000523950 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
VEGFA-225ENST00000523950 SYNE2Q8WXH0 6885 aaKnown RBP5.28□□□□□ -1.56
VEGFA-225ENST00000523950 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
VEGFA-225ENST00000523950 MT1XP80297 61 aa5.26□□□□□ -1.57
VEGFA-225ENST00000523950 ROMO1P60602 79 aa5.25□□□□□ -1.57
VEGFA-225ENST00000523950 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
VEGFA-225ENST00000523950 KRTAP13-4Q3LI77 160 aa5.19□□□□□ -1.58
VEGFA-225ENST00000523950 KRTAP12-2P59991 146 aa5.16□□□□□ -1.58
VEGFA-225ENST00000523950 A0A0D9SG42 100 aa5.14□□□□□ -1.59
VEGFA-225ENST00000523950 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
VEGFA-225ENST00000523950 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
VEGFA-225ENST00000523950 CAMK2N1Q7Z7J9 78 aa5.07□□□□□ -1.6
VEGFA-225ENST00000523950 SPINT4Q6UDR6 99 aa5.04□□□□□ -1.6
VEGFA-225ENST00000523950 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
VEGFA-225ENST00000523950 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
VEGFA-225ENST00000523950 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
VEGFA-225ENST00000523950 KMT2DO14686 5537 aa4.99□□□□□ -1.61
VEGFA-225ENST00000523950 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
VEGFA-225ENST00000523950 NEBP20929 6669 aa4.97□□□□□ -1.61
VEGFA-225ENST00000523950 SPRR2FQ96RM1 72 aa4.96□□□□□ -1.62
VEGFA-225ENST00000523950 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
VEGFA-225ENST00000523950 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
VEGFA-225ENST00000523950 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
VEGFA-225ENST00000523950 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
VEGFA-225ENST00000523950 SPRR2EP22531 72 aa4.86□□□□□ -1.63
VEGFA-225ENST00000523950 SPRR2BP35325 72 aa4.86□□□□□ -1.63
VEGFA-225ENST00000523950 SPRR2AP35326 72 aa4.86□□□□□ -1.63
VEGFA-225ENST00000523950 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
VEGFA-225ENST00000523950 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
VEGFA-225ENST00000523950 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
VEGFA-225ENST00000523950 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
VEGFA-225ENST00000523950 KRTAP20-1Q3LI63 56 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms