RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 RBM12B-AS1Q9P1G2 102 aa10.44□□□□□ -0.74
SQLE-206ENST00000523430 SPTSSBQ8NFR3 76 aa10.42□□□□□ -0.74
SQLE-206ENST00000523430 LCA10Q71F78 164 aa10.41□□□□□ -0.74
SQLE-206ENST00000523430 H1FX-AS1Q4G0G2 97 aa10.4□□□□□ -0.75
SQLE-206ENST00000523430 S4R3F8 94 aa10.38□□□□□ -0.75
SQLE-206ENST00000523430 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
SQLE-206ENST00000523430 A0A1B0GU69 56 aa10.36□□□□□ -0.75
SQLE-206ENST00000523430 MUC2Q02817 5179 aa10.29□□□□□ -0.76
SQLE-206ENST00000523430 BRK1Q8WUW1 75 aa10.25□□□□□ -0.77
SQLE-206ENST00000523430 A6NED7 52 aa10.23□□□□□ -0.77
SQLE-206ENST00000523430 KRTAP19-2Q3LHN2 52 aa10.22□□□□□ -0.77
SQLE-206ENST00000523430 SEC61GP60059 68 aa10.2□□□□□ -0.78
SQLE-206ENST00000523430 A8MU10 97 aa10.15□□□□□ -0.79
SQLE-206ENST00000523430 UBR4Q5T4S7 5183 aa10.14□□□□□ -0.79
SQLE-206ENST00000523430 CSAG1Q6PB30 78 aa10.08□□□□□ -0.8
SQLE-206ENST00000523430 CDC42SE1Q9NRR8 79 aa10.04□□□□□ -0.8
SQLE-206ENST00000523430 UQCR11O14957 56 aa10.04□□□□□ -0.8
SQLE-206ENST00000523430 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
SQLE-206ENST00000523430 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
SQLE-206ENST00000523430 PRO0628Q9UI54 55 aa10.04□□□□□ -0.8
SQLE-206ENST00000523430 RNF213Q63HN8 5207 aa10.03□□□□□ -0.8
SQLE-206ENST00000523430 A0A1B0GU33 70 aa9.99□□□□□ -0.81
SQLE-206ENST00000523430 MIR22HGQ0VDD5 57 aa9.97□□□□□ -0.81
SQLE-206ENST00000523430 ADM2Q7Z4H4 148 aa9.97□□□□□ -0.81
SQLE-206ENST00000523430 P0C880 135 aa9.96□□□□□ -0.82
SQLE-206ENST00000523430 SPATA8Q6RVD6 105 aa9.95□□□□□ -0.82
SQLE-206ENST00000523430 FLGP20930 4061 aaPredicted RBP9.93□□□□□ -0.82
SQLE-206ENST00000523430 H0YAA0 97 aa9.93□□□□□ -0.82
SQLE-206ENST00000523430 LCE2CQ5TA81 110 aa9.92□□□□□ -0.82
SQLE-206ENST00000523430 FAT4Q6V0I7 4981 aa9.89□□□□□ -0.83
SQLE-206ENST00000523430 KRTAP13-4Q3LI77 160 aa9.83□□□□□ -0.84
SQLE-206ENST00000523430 MT1HP80294 61 aa9.71□□□□□ -0.85
SQLE-206ENST00000523430 A0A0D9SG42 100 aa9.65□□□□□ -0.86
SQLE-206ENST00000523430 LORP23490 312 aaPredicted RBP9.65□□□□□ -0.86
SQLE-206ENST00000523430 PMAIP1Q13794 54 aa9.64□□□□□ -0.87
SQLE-206ENST00000523430 A6NN06 94 aa9.61□□□□□ -0.87
SQLE-206ENST00000523430 M0QZ58 72 aa9.61□□□□□ -0.87
SQLE-206ENST00000523430 M0R2T5 61 aa9.6□□□□□ -0.87
SQLE-206ENST00000523430 R4GN34 69 aa9.57□□□□□ -0.88
SQLE-206ENST00000523430 SVIPQ8NHG7 77 aa9.5□□□□□ -0.89
SQLE-206ENST00000523430 LINC01554Q52M75 96 aa9.46□□□□□ -0.9
SQLE-206ENST00000523430 KRTAP12-2P59991 146 aa9.43□□□□□ -0.9
SQLE-206ENST00000523430 K7ERS5 55 aa9.42□□□□□ -0.9
SQLE-206ENST00000523430 KRTAP12-1P59990 96 aa9.42□□□□□ -0.9
SQLE-206ENST00000523430 SPINT4Q6UDR6 99 aa9.38□□□□□ -0.91
SQLE-206ENST00000523430 MT2AP02795 61 aa9.36□□□□□ -0.91
SQLE-206ENST00000523430 KRTAP9-8Q9BYQ0 159 aa9.36□□□□□ -0.91
SQLE-206ENST00000523430 CRIPTQ9P021 101 aa9.36□□□□□ -0.91
SQLE-206ENST00000523430 MT1FP04733 61 aa9.33□□□□□ -0.92
SQLE-206ENST00000523430 KTN1-AS1Q86SY8 53 aa9.3□□□□□ -0.92
SQLE-206ENST00000523430 KRTAP10-10P60014 251 aa9.25□□□□□ -0.93
SQLE-206ENST00000523430 KRTAP19-1Q8IUB9 90 aa9.21□□□□□ -0.94
SQLE-206ENST00000523430 SPRR2GQ9BYE4 73 aa9.2□□□□□ -0.94
SQLE-206ENST00000523430 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
SQLE-206ENST00000523430 ROMO1P60602 79 aa9.12□□□□□ -0.95
SQLE-206ENST00000523430 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
SQLE-206ENST00000523430 KRTAP9-3Q9BYQ3 159 aa9□□□□□ -0.97
SQLE-206ENST00000523430 CAMK2N1Q7Z7J9 78 aa8.98□□□□□ -0.97
SQLE-206ENST00000523430 KRTAP19-8Q3LI54 63 aa8.93□□□□□ -0.98
SQLE-206ENST00000523430 C10orf95Q9H7T3 257 aa8.91□□□□□ -0.98
SQLE-206ENST00000523430 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
SQLE-206ENST00000523430 MT1BP07438 61 aa8.85□□□□□ -0.99
SQLE-206ENST00000523430 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
SQLE-206ENST00000523430 LCE2BO14633 110 aa8.77□□□□□ -1.01
SQLE-206ENST00000523430 MT1XP80297 61 aa8.6□□□□□ -1.03
SQLE-206ENST00000523430 KRTAP10-5P60370 271 aa8.6□□□□□ -1.03
SQLE-206ENST00000523430 USH2AO75445 5202 aa8.57□□□□□ -1.04
SQLE-206ENST00000523430 TNP1P09430 55 aa8.54□□□□□ -1.04
SQLE-206ENST00000523430 PRO2289Q9P1D8 64 aa8.4□□□□□ -1.07
SQLE-206ENST00000523430 PP632Q6XCG6 107 aa8.33□□□□□ -1.08
SQLE-206ENST00000523430 KRTAP10-7P60409 375 aaPredicted RBP8.3□□□□□ -1.08
SQLE-206ENST00000523430 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
SQLE-206ENST00000523430 SSPOA2VEC9 5147 aa8.25□□□□□ -1.09
SQLE-206ENST00000523430 LCE3AQ5TA76 89 aa8.24□□□□□ -1.09
SQLE-206ENST00000523430 LCE2DQ5TA82 110 aaPredicted RBP8.23□□□□□ -1.09
SQLE-206ENST00000523430 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
SQLE-206ENST00000523430 FSIP2Q5CZC0 6907 aa8.19□□□□□ -1.1
SQLE-206ENST00000523430 KRTAP19-6Q3LI70 58 aa8.13□□□□□ -1.11
SQLE-206ENST00000523430 KRTAP8-1Q8IUC2 63 aa8.01□□□□□ -1.13
SQLE-206ENST00000523430 KMT2DO14686 5537 aa8□□□□□ -1.13
SQLE-206ENST00000523430 KRTAP4-8A0A0G2JLE6 195 aa7.94□□□□□ -1.14
SQLE-206ENST00000523430 KRTAP4-8Q9BYQ9 185 aa7.94□□□□□ -1.14
SQLE-206ENST00000523430 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
SQLE-206ENST00000523430 KRTAP12-3P60328 96 aa7.86□□□□□ -1.15
SQLE-206ENST00000523430 FCGBPQ9Y6R7 5405 aaPredicted RBP7.84□□□□□ -1.15
SQLE-206ENST00000523430 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
SQLE-206ENST00000523430 KRTAP19-5Q3LI72 72 aa7.81□□□□□ -1.16
SQLE-206ENST00000523430 KRTAP19-7Q3SYF9 63 aa7.67□□□□□ -1.18
SQLE-206ENST00000523430 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
SQLE-206ENST00000523430 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
SQLE-206ENST00000523430 MT1EP04732 61 aa7.52□□□□□ -1.21
SQLE-206ENST00000523430 SPRR5A0A1B0GTR4 108 aa7.51□□□□□ -1.21
SQLE-206ENST00000523430 MT1LQ93083 61 aa7.39□□□□□ -1.23
SQLE-206ENST00000523430 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
SQLE-206ENST00000523430 SYNE2Q8WXH0 6885 aaKnown RBP7.31□□□□□ -1.24
SQLE-206ENST00000523430 MUC12Q9UKN1 5478 aa7.3□□□□□ -1.24
SQLE-206ENST00000523430 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
SQLE-206ENST00000523430 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
SQLE-206ENST00000523430 LUZP6Q538Z0 58 aa7.27□□□□□ -1.25
SQLE-206ENST00000523430 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms