RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
SDC2-207ENST00000522911 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
SDC2-207ENST00000522911 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
SDC2-207ENST00000522911 V9GYY9 64 aa4.7□□□□□ -1.66
SDC2-207ENST00000522911 A0A087WSZ3 146 aa4.69□□□□□ -1.66
SDC2-207ENST00000522911 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
SDC2-207ENST00000522911 K7EQZ3 153 aa4.69□□□□□ -1.66
SDC2-207ENST00000522911 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
SDC2-207ENST00000522911 MT1FP04733 61 aa4.68□□□□□ -1.66
SDC2-207ENST00000522911 A8MWP4 228 aa4.67□□□□□ -1.66
SDC2-207ENST00000522911 HRES1P13985 223 aa4.67□□□□□ -1.66
SDC2-207ENST00000522911 LINC00313P59037 77 aa4.67□□□□□ -1.66
SDC2-207ENST00000522911 SPANXA2-OT1Q8N9U9 137 aa4.67□□□□□ -1.66
SDC2-207ENST00000522911 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
SDC2-207ENST00000522911 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
SDC2-207ENST00000522911 Q1T7F1 81 aa4.65□□□□□ -1.67
SDC2-207ENST00000522911 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
SDC2-207ENST00000522911 KRTAP10-10P60014 251 aa4.64□□□□□ -1.67
SDC2-207ENST00000522911 NOTCH2NLQ7Z3S9 236 aa4.64□□□□□ -1.67
SDC2-207ENST00000522911 TP53AIP1Q9HCN2 124 aa4.64□□□□□ -1.67
SDC2-207ENST00000522911 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
SDC2-207ENST00000522911 TRAV22A0A0B4J277 110 aa4.63□□□□□ -1.67
SDC2-207ENST00000522911 WFDC13Q8IUB5 93 aa4.63□□□□□ -1.67
SDC2-207ENST00000522911 C1orf64Q8NEQ6 169 aa4.63□□□□□ -1.67
SDC2-207ENST00000522911 LINC00472Q9H8W2 130 aa4.63□□□□□ -1.67
SDC2-207ENST00000522911 H0Y9P7 68 aa4.62□□□□□ -1.67
SDC2-207ENST00000522911 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
SDC2-207ENST00000522911 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
SDC2-207ENST00000522911 LINC00208Q96KT6 92 aa4.61□□□□□ -1.67
SDC2-207ENST00000522911 C8orf87E5RJ46 101 aa4.58□□□□□ -1.68
SDC2-207ENST00000522911 DEFB116Q30KQ4 102 aa4.58□□□□□ -1.68
SDC2-207ENST00000522911 MMP24-AS1A0A0U1RRL7 71 aa4.55□□□□□ -1.68
SDC2-207ENST00000522911 A0A1B0GVX0 72 aa4.55□□□□□ -1.68
SDC2-207ENST00000522911 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
SDC2-207ENST00000522911 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.68
SDC2-207ENST00000522911 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
SDC2-207ENST00000522911 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
SDC2-207ENST00000522911 SPINK7P58062 85 aa4.52□□□□□ -1.69
SDC2-207ENST00000522911 MRPL34Q9BQ48 92 aaKnown RBP4.51□□□□□ -1.69
SDC2-207ENST00000522911 KRTAP6-3Q3LI67 103 aa4.5□□□□□ -1.69
SDC2-207ENST00000522911 LOC101927531A0A1B0GV80 90 aa4.49□□□□□ -1.69
SDC2-207ENST00000522911 PSPHP1O15172 72 aa4.49□□□□□ -1.69
SDC2-207ENST00000522911 NDUFS5O43920 106 aa4.48□□□□□ -1.69
SDC2-207ENST00000522911 COA5Q86WW8 74 aa4.48□□□□□ -1.69
SDC2-207ENST00000522911 A8MUN3 132 aa4.46□□□□□ -1.7
SDC2-207ENST00000522911 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
SDC2-207ENST00000522911 Q5VV11 94 aa4.45□□□□□ -1.7
SDC2-207ENST00000522911 PMAIP1Q13794 54 aa4.44□□□□□ -1.7
SDC2-207ENST00000522911 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
SDC2-207ENST00000522911 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
SDC2-207ENST00000522911 ACYP2P14621 99 aa4.42□□□□□ -1.7
SDC2-207ENST00000522911 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
SDC2-207ENST00000522911 A6NED7 52 aa4.4□□□□□ -1.71
SDC2-207ENST00000522911 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
SDC2-207ENST00000522911 CDC42SE1Q9NRR8 79 aa4.39□□□□□ -1.71
SDC2-207ENST00000522911 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
SDC2-207ENST00000522911 DMAC1Q96GE9 116 aa4.34□□□□□ -1.71
SDC2-207ENST00000522911 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
SDC2-207ENST00000522911 IGKV2-30P06310 120 aa4.32□□□□□ -1.72
SDC2-207ENST00000522911 SEC61GP60059 68 aa4.32□□□□□ -1.72
SDC2-207ENST00000522911 Q5W150 140 aa4.32□□□□□ -1.72
SDC2-207ENST00000522911 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
SDC2-207ENST00000522911 SPTSSBQ8NFR3 76 aa4.32□□□□□ -1.72
SDC2-207ENST00000522911 LCA10Q71F78 164 aa4.31□□□□□ -1.72
SDC2-207ENST00000522911 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
SDC2-207ENST00000522911 NEBP20929 6669 aa4.3□□□□□ -1.72
SDC2-207ENST00000522911 A0A1B0GU69 56 aa4.28□□□□□ -1.72
SDC2-207ENST00000522911 A6NN06 94 aa4.27□□□□□ -1.73
SDC2-207ENST00000522911 MT1BP07438 61 aa4.27□□□□□ -1.73
SDC2-207ENST00000522911 KRTAP19-8Q3LI54 63 aa4.27□□□□□ -1.73
SDC2-207ENST00000522911 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
SDC2-207ENST00000522911 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
SDC2-207ENST00000522911 KRTAP5-9P26371 169 aa4.25□□□□□ -1.73
SDC2-207ENST00000522911 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
SDC2-207ENST00000522911 UQCR11O14957 56 aa4.23□□□□□ -1.73
SDC2-207ENST00000522911 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
SDC2-207ENST00000522911 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
SDC2-207ENST00000522911 A8MU10 97 aa4.21□□□□□ -1.74
SDC2-207ENST00000522911 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
SDC2-207ENST00000522911 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
SDC2-207ENST00000522911 KMT2DO14686 5537 aa4.2□□□□□ -1.74
SDC2-207ENST00000522911 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
SDC2-207ENST00000522911 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
SDC2-207ENST00000522911 S4R3F8 94 aa4.17□□□□□ -1.74
SDC2-207ENST00000522911 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
SDC2-207ENST00000522911 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
SDC2-207ENST00000522911 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
SDC2-207ENST00000522911 H0YAA0 97 aa4.05□□□□□ -1.76
SDC2-207ENST00000522911 A0A1B0GU33 70 aa4.03□□□□□ -1.76
SDC2-207ENST00000522911 K7ERS5 55 aa4.03□□□□□ -1.76
SDC2-207ENST00000522911 LINC01554Q52M75 96 aa4□□□□□ -1.77
SDC2-207ENST00000522911 PRO2289Q9P1D8 64 aa3.99□□□□□ -1.77
SDC2-207ENST00000522911 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
SDC2-207ENST00000522911 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
SDC2-207ENST00000522911 SPRR2EP22531 72 aa3.96□□□□□ -1.78
SDC2-207ENST00000522911 SPRR2BP35325 72 aa3.96□□□□□ -1.78
SDC2-207ENST00000522911 SPRR2AP35326 72 aa3.96□□□□□ -1.78
SDC2-207ENST00000522911 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
SDC2-207ENST00000522911 MT1XP80297 61 aa3.96□□□□□ -1.78
SDC2-207ENST00000522911 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms