RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-223ENST00000522665 LCE2CQ5TA81 110 aa7.43□□□□□ -1.22
NDRG1-223ENST00000522665 LCA10Q71F78 164 aa7.41□□□□□ -1.22
NDRG1-223ENST00000522665 SPTSSBQ8NFR3 76 aa7.41□□□□□ -1.22
NDRG1-223ENST00000522665 FAT4Q6V0I7 4981 aa7.34□□□□□ -1.23
NDRG1-223ENST00000522665 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
NDRG1-223ENST00000522665 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
NDRG1-223ENST00000522665 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
NDRG1-223ENST00000522665 MT1HP80294 61 aa7.32□□□□□ -1.24
NDRG1-223ENST00000522665 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
NDRG1-223ENST00000522665 M0R2T5 61 aa7.29□□□□□ -1.24
NDRG1-223ENST00000522665 SMIM26A0A096LP01 95 aa7.21□□□□□ -1.26
NDRG1-223ENST00000522665 LCE2AQ5TA79 106 aaPredicted RBP7.19□□□□□ -1.26
NDRG1-223ENST00000522665 H0YAA0 97 aa7.17□□□□□ -1.26
NDRG1-223ENST00000522665 V9GYY9 64 aa7.15□□□□□ -1.26
NDRG1-223ENST00000522665 SEC61GP60059 68 aa7.14□□□□□ -1.27
NDRG1-223ENST00000522665 LINC01558Q9Y6Z2 57 aa7.12□□□□□ -1.27
NDRG1-223ENST00000522665 Q1T7F1 81 aa7.1□□□□□ -1.27
NDRG1-223ENST00000522665 ADM2Q7Z4H4 148 aa7.1□□□□□ -1.27
NDRG1-223ENST00000522665 A0A1B0GU69 56 aa7.09□□□□□ -1.27
NDRG1-223ENST00000522665 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.27
NDRG1-223ENST00000522665 PRR15LQ9BU68 103 aa7.09□□□□□ -1.27
NDRG1-223ENST00000522665 LORP23490 312 aaPredicted RBP7.05□□□□□ -1.28
NDRG1-223ENST00000522665 KRTAP3-2Q9BYR7 98 aa7.03□□□□□ -1.28
NDRG1-223ENST00000522665 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
NDRG1-223ENST00000522665 P0C880 135 aa7□□□□□ -1.29
NDRG1-223ENST00000522665 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
NDRG1-223ENST00000522665 MT2AP02795 61 aa6.99□□□□□ -1.29
NDRG1-223ENST00000522665 PSPHP1O15172 72 aa6.96□□□□□ -1.3
NDRG1-223ENST00000522665 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
NDRG1-223ENST00000522665 MT1FP04733 61 aa6.94□□□□□ -1.3
NDRG1-223ENST00000522665 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
NDRG1-223ENST00000522665 A0A1B0GU33 70 aa6.93□□□□□ -1.3
NDRG1-223ENST00000522665 Q5VV11 94 aa6.9□□□□□ -1.3
NDRG1-223ENST00000522665 R4GN34 69 aa6.89□□□□□ -1.31
NDRG1-223ENST00000522665 M0QZ58 72 aa6.87□□□□□ -1.31
NDRG1-223ENST00000522665 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
NDRG1-223ENST00000522665 UQCR11O14957 56 aa6.85□□□□□ -1.31
NDRG1-223ENST00000522665 A6NED7 52 aa6.79□□□□□ -1.32
NDRG1-223ENST00000522665 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
NDRG1-223ENST00000522665 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
NDRG1-223ENST00000522665 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
NDRG1-223ENST00000522665 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
NDRG1-223ENST00000522665 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
NDRG1-223ENST00000522665 KRTAP19-1Q8IUB9 90 aa6.75□□□□□ -1.33
NDRG1-223ENST00000522665 MIR22HGQ0VDD5 57 aa6.74□□□□□ -1.33
NDRG1-223ENST00000522665 LINC01554Q52M75 96 aa6.72□□□□□ -1.33
NDRG1-223ENST00000522665 A0A0D9SG42 100 aa6.67□□□□□ -1.34
NDRG1-223ENST00000522665 A6NN06 94 aa6.65□□□□□ -1.34
NDRG1-223ENST00000522665 A8MU10 97 aa6.64□□□□□ -1.35
NDRG1-223ENST00000522665 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
NDRG1-223ENST00000522665 CDC42SE1Q9NRR8 79 aa6.64□□□□□ -1.35
NDRG1-223ENST00000522665 CRCT1Q9UGL9 99 aa6.63□□□□□ -1.35
NDRG1-223ENST00000522665 LCE2BO14633 110 aa6.59□□□□□ -1.35
NDRG1-223ENST00000522665 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
NDRG1-223ENST00000522665 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
NDRG1-223ENST00000522665 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
NDRG1-223ENST00000522665 K7ERS5 55 aa6.54□□□□□ -1.36
NDRG1-223ENST00000522665 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
NDRG1-223ENST00000522665 MT1BP07438 61 aa6.53□□□□□ -1.36
NDRG1-223ENST00000522665 FSIP2Q5CZC0 6907 aa6.52□□□□□ -1.37
NDRG1-223ENST00000522665 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
NDRG1-223ENST00000522665 USH2AO75445 5202 aa6.47□□□□□ -1.37
NDRG1-223ENST00000522665 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
NDRG1-223ENST00000522665 PRO2289Q9P1D8 64 aa6.33□□□□□ -1.4
NDRG1-223ENST00000522665 PRO0628Q9UI54 55 aa6.33□□□□□ -1.4
NDRG1-223ENST00000522665 MT1XP80297 61 aa6.28□□□□□ -1.4
NDRG1-223ENST00000522665 KRTAP19-6Q3LI70 58 aa6.28□□□□□ -1.4
NDRG1-223ENST00000522665 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
NDRG1-223ENST00000522665 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
NDRG1-223ENST00000522665 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
NDRG1-223ENST00000522665 ROMO1P60602 79 aa6.18□□□□□ -1.42
NDRG1-223ENST00000522665 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
NDRG1-223ENST00000522665 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.15□□□□□ -1.42
NDRG1-223ENST00000522665 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
NDRG1-223ENST00000522665 TNP1P09430 55 aa6.09□□□□□ -1.43
NDRG1-223ENST00000522665 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
NDRG1-223ENST00000522665 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
NDRG1-223ENST00000522665 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
NDRG1-223ENST00000522665 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
NDRG1-223ENST00000522665 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.46
NDRG1-223ENST00000522665 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
NDRG1-223ENST00000522665 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
NDRG1-223ENST00000522665 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
NDRG1-223ENST00000522665 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
NDRG1-223ENST00000522665 KRTAP6-3Q3LI67 103 aa5.81□□□□□ -1.48
NDRG1-223ENST00000522665 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
NDRG1-223ENST00000522665 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
NDRG1-223ENST00000522665 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
NDRG1-223ENST00000522665 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
NDRG1-223ENST00000522665 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
NDRG1-223ENST00000522665 KMT2DO14686 5537 aa5.73□□□□□ -1.49
NDRG1-223ENST00000522665 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
NDRG1-223ENST00000522665 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
NDRG1-223ENST00000522665 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
NDRG1-223ENST00000522665 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
NDRG1-223ENST00000522665 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
NDRG1-223ENST00000522665 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
NDRG1-223ENST00000522665 MT1EP04732 61 aa5.53□□□□□ -1.52
NDRG1-223ENST00000522665 KRTAP15-1Q3LI76 137 aa5.46□□□□□ -1.54
NDRG1-223ENST00000522665 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms