RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
HMBOX1-209ENST00000522468 LINC00208Q96KT6 92 aa6.68□□□□□ -1.34
HMBOX1-209ENST00000522468 H3BPC8 53 aa6.66□□□□□ -1.34
HMBOX1-209ENST00000522468 SERP2Q8N6R1 65 aa6.66□□□□□ -1.34
HMBOX1-209ENST00000522468 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
HMBOX1-209ENST00000522468 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
HMBOX1-209ENST00000522468 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
HMBOX1-209ENST00000522468 H1FX-AS1Q4G0G2 97 aa6.6□□□□□ -1.35
HMBOX1-209ENST00000522468 ANAPC13Q9BS18 74 aa6.59□□□□□ -1.35
HMBOX1-209ENST00000522468 COX7CP15954 63 aa6.58□□□□□ -1.36
HMBOX1-209ENST00000522468 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
HMBOX1-209ENST00000522468 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
HMBOX1-209ENST00000522468 KLKP1Q107X0 134 aa6.56□□□□□ -1.36
HMBOX1-209ENST00000522468 KRTAP6-3Q3LI67 103 aa6.56□□□□□ -1.36
HMBOX1-209ENST00000522468 SNURFQ9Y675 71 aa6.55□□□□□ -1.36
HMBOX1-209ENST00000522468 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
HMBOX1-209ENST00000522468 CCDC179H3BU77 68 aa6.44□□□□□ -1.38
HMBOX1-209ENST00000522468 NDUFC1O43677 76 aa6.42□□□□□ -1.38
HMBOX1-209ENST00000522468 A8MUN3 132 aa6.41□□□□□ -1.38
HMBOX1-209ENST00000522468 MUC12Q9UKN1 5478 aa6.41□□□□□ -1.38
HMBOX1-209ENST00000522468 MT1BP07438 61 aa6.4□□□□□ -1.38
HMBOX1-209ENST00000522468 CYSTM1Q9H1C7 97 aa6.39□□□□□ -1.39
HMBOX1-209ENST00000522468 SPANXA2-OT1Q8N9U9 137 aa6.38□□□□□ -1.39
HMBOX1-209ENST00000522468 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
HMBOX1-209ENST00000522468 NEBP20929 6669 aa6.38□□□□□ -1.39
HMBOX1-209ENST00000522468 H7BZZ5 65 aa6.36□□□□□ -1.39
HMBOX1-209ENST00000522468 S4R3F8 94 aa6.36□□□□□ -1.39
HMBOX1-209ENST00000522468 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
HMBOX1-209ENST00000522468 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
HMBOX1-209ENST00000522468 ACYP2P14621 99 aa6.33□□□□□ -1.4
HMBOX1-209ENST00000522468 A6NN06 94 aa6.32□□□□□ -1.4
HMBOX1-209ENST00000522468 LCA10Q71F78 164 aa6.31□□□□□ -1.4
HMBOX1-209ENST00000522468 Q5VV11 94 aa6.3□□□□□ -1.4
HMBOX1-209ENST00000522468 PCP4P48539 62 aa6.28□□□□□ -1.4
HMBOX1-209ENST00000522468 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
HMBOX1-209ENST00000522468 CSAG1Q6PB30 78 aa6.27□□□□□ -1.41
HMBOX1-209ENST00000522468 KMT2DO14686 5537 aa6.23□□□□□ -1.41
HMBOX1-209ENST00000522468 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
HMBOX1-209ENST00000522468 KRTAP5-9P26371 169 aa6.22□□□□□ -1.41
HMBOX1-209ENST00000522468 MDN1Q9NU22 5596 aa6.21□□□□□ -1.42
HMBOX1-209ENST00000522468 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
HMBOX1-209ENST00000522468 TMEM258P61165 79 aa6.21□□□□□ -1.42
HMBOX1-209ENST00000522468 COA5Q86WW8 74 aa6.19□□□□□ -1.42
HMBOX1-209ENST00000522468 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
HMBOX1-209ENST00000522468 KRTAP20-1Q3LI63 56 aa6.14□□□□□ -1.43
HMBOX1-209ENST00000522468 CRIPTQ9P021 101 aa6.11□□□□□ -1.43
HMBOX1-209ENST00000522468 H0YAA0 97 aa6.07□□□□□ -1.44
HMBOX1-209ENST00000522468 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
HMBOX1-209ENST00000522468 SERP1Q9Y6X1 66 aa6.03□□□□□ -1.44
HMBOX1-209ENST00000522468 P0C880 135 aa5.95□□□□□ -1.46
HMBOX1-209ENST00000522468 KRTAP2-3P0C7H8 128 aa5.94□□□□□ -1.46
HMBOX1-209ENST00000522468 SEC61GP60059 68 aa5.94□□□□□ -1.46
HMBOX1-209ENST00000522468 MT1XP80297 61 aa5.94□□□□□ -1.46
HMBOX1-209ENST00000522468 KRTAP2-4Q9BYR9 128 aa5.94□□□□□ -1.46
HMBOX1-209ENST00000522468 SPRR2FQ96RM1 72 aa5.92□□□□□ -1.46
HMBOX1-209ENST00000522468 A0A1B0GU69 56 aa5.88□□□□□ -1.47
HMBOX1-209ENST00000522468 RPS28P62857 69 aaKnown RBP5.88□□□□□ -1.47
HMBOX1-209ENST00000522468 PRO2289Q9P1D8 64 aa5.88□□□□□ -1.47
HMBOX1-209ENST00000522468 SPRR2EP22531 72 aa5.86□□□□□ -1.47
HMBOX1-209ENST00000522468 SPRR2BP35325 72 aa5.86□□□□□ -1.47
HMBOX1-209ENST00000522468 SPRR2AP35326 72 aa5.86□□□□□ -1.47
HMBOX1-209ENST00000522468 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
HMBOX1-209ENST00000522468 R4GN34 69 aa5.86□□□□□ -1.47
HMBOX1-209ENST00000522468 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
HMBOX1-209ENST00000522468 SMIM26A0A096LP01 95 aa5.83□□□□□ -1.48
HMBOX1-209ENST00000522468 M0QZ58 72 aa5.83□□□□□ -1.48
HMBOX1-209ENST00000522468 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
HMBOX1-209ENST00000522468 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
HMBOX1-209ENST00000522468 KRTAP8-1Q8IUC2 63 aa5.82□□□□□ -1.48
HMBOX1-209ENST00000522468 V9GYY9 64 aa5.8□□□□□ -1.48
HMBOX1-209ENST00000522468 A0A1B0GU33 70 aa5.79□□□□□ -1.48
HMBOX1-209ENST00000522468 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
HMBOX1-209ENST00000522468 Q1T7F1 81 aa5.77□□□□□ -1.49
HMBOX1-209ENST00000522468 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
HMBOX1-209ENST00000522468 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
HMBOX1-209ENST00000522468 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
HMBOX1-209ENST00000522468 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
HMBOX1-209ENST00000522468 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
HMBOX1-209ENST00000522468 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
HMBOX1-209ENST00000522468 PSPHP1O15172 72 aa5.7□□□□□ -1.5
HMBOX1-209ENST00000522468 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
HMBOX1-209ENST00000522468 SPRR2DP22532 72 aa5.67□□□□□ -1.5
HMBOX1-209ENST00000522468 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
HMBOX1-209ENST00000522468 UQCR11O14957 56 aa5.64□□□□□ -1.51
HMBOX1-209ENST00000522468 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
HMBOX1-209ENST00000522468 A0A0D9SG42 100 aa5.63□□□□□ -1.51
HMBOX1-209ENST00000522468 LOC100996750A0A140TA64 210 aa5.6□□□□□ -1.51
HMBOX1-209ENST00000522468 KRTAP4-6Q9BYQ5 205 aa5.6□□□□□ -1.51
HMBOX1-209ENST00000522468 A8MU10 97 aa5.57□□□□□ -1.52
HMBOX1-209ENST00000522468 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
HMBOX1-209ENST00000522468 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
HMBOX1-209ENST00000522468 A6NED7 52 aa5.54□□□□□ -1.52
HMBOX1-209ENST00000522468 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
HMBOX1-209ENST00000522468 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
HMBOX1-209ENST00000522468 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
HMBOX1-209ENST00000522468 K7ERS5 55 aa5.38□□□□□ -1.55
HMBOX1-209ENST00000522468 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
HMBOX1-209ENST00000522468 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
HMBOX1-209ENST00000522468 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
HMBOX1-209ENST00000522468 GPR98Q8WXG9 6306 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms